ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A2742:A2741

Extra

PDB:
ATOM 1 O3' A A2741 38.924 194.380 123.511 1.00 72.82 O
ATOM 2 P C A2742 39.312 195.924 123.360 1.00 71.28 P
ATOM 3 OP1 C A2742 39.777 196.421 124.671 1.00 72.02 O
ATOM 4 OP2 C A2742 38.225 196.635 122.634 1.00 70.52 O
ATOM 5 O5' C A2742 40.582 195.909 122.421 1.00 71.15 O
ATOM 6 C5' C A2742 40.938 197.086 121.708 1.00 72.62 C
ATOM 7 C4' C A2742 41.916 196.744 120.636 1.00 73.39 C
ATOM 8 O4' C A2742 43.137 196.304 121.269 1.00 74.18 O
ATOM 9 C3' C A2742 41.512 195.575 119.755 1.00 72.98 C
ATOM 10 O3' C A2742 40.623 195.972 118.724 1.00 72.67 O
ATOM 11 C2' C A2742 42.859 195.105 119.244 1.00 73.47 C
ATOM 12 O2' C A2742 43.375 195.967 118.250 1.00 73.79 O
ATOM 13 C1' C A2742 43.700 195.250 120.513 1.00 74.35 C
ATOM 14 N1 C A2742 43.706 194.026 121.338 1.00 74.50 N
ATOM 15 C2 C A2742 44.669 193.067 121.062 1.00 73.83 C
ATOM 16 O2 C A2742 45.464 193.273 120.132 1.00 75.24 O
ATOM 17 N3 C A2742 44.716 191.940 121.804 1.00 73.13 N
ATOM 18 C4 C A2742 43.841 191.754 122.790 1.00 73.13 C
ATOM 19 N4 C A2742 43.938 190.631 123.502 1.00 72.05 N
ATOM 20 C5 C A2742 42.832 192.713 123.090 1.00 73.99 C
ATOM 21 C6 C A2742 42.801 193.827 122.347 1.00 74.30 C
ATOM 22 P U A2743 39.641 194.890 118.065 1.00 72.73 P
ATOM 23 OP1 U A2743 38.880 195.612 117.012 1.00 72.52 O
ATOM 24 OP2 U A2743 38.906 194.151 119.133 1.00 71.73 O
ATOM 25 O5' U A2743 40.651 193.897 117.337 1.00 72.95 O
TER

ATOM 1 O3' C B2740 42.977 194.510 129.149 1.00 73.30 O
ATOM 2 P A B2741 41.404 194.289 129.085 1.00 72.12 P
ATOM 3 OP1 A B2741 40.846 195.654 129.183 1.00 72.38 O
ATOM 4 OP2 A B2741 41.020 193.254 130.077 1.00 71.58 O
ATOM 5 O5' A B2741 41.149 193.705 127.631 1.00 71.74 O
ATOM 6 C5' A B2741 39.848 193.767 127.054 1.00 72.42 C
ATOM 7 C4' A B2741 39.951 193.675 125.556 1.00 73.18 C
ATOM 8 O4' A B2741 40.451 192.359 125.203 1.00 72.99 O
ATOM 9 C3' A B2741 38.635 193.845 124.798 1.00 73.10 C
ATOM 10 O3' A B2741 38.924 194.380 123.511 1.00 72.82 O
ATOM 11 C2' A B2741 38.177 192.410 124.610 1.00 73.11 C
ATOM 12 O2' A B2741 37.323 192.282 123.492 1.00 72.70 O
ATOM 13 C1' A B2741 39.518 191.724 124.361 1.00 72.77 C
ATOM 14 N9 A B2741 39.530 190.293 124.632 1.00 72.29 N
ATOM 15 C8 A B2741 39.975 189.341 123.761 1.00 71.63 C
ATOM 16 N7 A B2741 39.836 188.118 124.197 1.00 70.90 N
ATOM 17 C5 A B2741 39.274 188.273 125.453 1.00 70.91 C
ATOM 18 C6 A B2741 38.869 187.341 126.419 1.00 70.54 C
ATOM 19 N6 A B2741 38.972 186.022 126.257 1.00 69.87 N
ATOM 20 N1 A B2741 38.343 187.814 127.566 1.00 70.01 N
ATOM 21 C2 A B2741 38.230 189.138 127.713 1.00 71.01 C
ATOM 22 N3 A B2741 38.568 190.117 126.869 1.00 71.47 N
ATOM 23 C4 A B2741 39.092 189.609 125.743 1.00 71.60 C
ATOM 24 P C B2742 39.312 195.924 123.360 1.00 71.28 P
ATOM 25 OP1 C B2742 39.777 196.421 124.671 1.00 72.02 O
ATOM 26 OP2 C B2742 38.225 196.635 122.634 1.00 70.52 O
ATOM 27 O5' C B2742 40.582 195.909 122.421 1.00 71.15 O
TER

Atoms:
C2: (44.669,193.067,121.062)
OP1: (39.777,196.421,124.671)
OP2: (38.225,196.635,122.634)
C4: (43.841,191.754,122.790)
O5': (40.582,195.909,122.421)
C3': (41.512,195.575,119.755)
C1': (43.700,195.250,120.513)
O4': (43.137,196.304,121.269)
C5': (40.938,197.086,121.708)
P: (39.312,195.924,123.360)
O2: (45.464,193.273,120.132)
C4': (41.916,196.744,120.636)
C2': (42.859,195.105,119.244)
O2': (43.375,195.967,118.250)
N1: (43.706,194.026,121.338)
N3: (44.716,191.940,121.804)
N4: (43.938,190.631,123.502)
C6: (42.801,193.827,122.347)
C5: (42.832,192.713,123.090)
O3': (40.623,195.972,118.724)
OP1: (40.846,195.654,129.183)
OP2: (41.020,193.254,130.077)
C3': (38.635,193.845,124.798)
C1': (39.518,191.724,124.361)
C5': (39.848,193.767,127.054)
O4': (40.451,192.359,125.203)
C8: (39.975,189.341,123.761)
O2': (37.323,192.282,123.492)
C6: (38.869,187.341,126.419)
C5: (39.274,188.273,125.453)
C4: (39.092,189.609,125.743)
P: (41.404,194.289,129.085)
C4': (39.951,193.675,125.556)
C2': (38.177,192.410,124.610)
C2: (38.230,189.138,127.713)
N1: (38.343,187.814,127.566)
N3: (38.568,190.117,126.869)
N6: (38.972,186.022,126.257)
N7: (39.836,188.118,124.197)
N9: (39.530,190.293,124.632)
O5': (41.149,193.705,127.631)
O3': (38.924,194.380,123.511)
Image (generated by PyMOL):
PyMOL image
show in jmol