Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1MJI:C9:C8
Extra
PDB:
ATOM 1 O3' A A 8 31.173 -4.971 16.979 1.00 57.93 O
ATOM 2 P C A 9 32.729 -4.803 16.547 1.00 62.85 P
ATOM 3 OP1 C A 9 33.452 -3.723 17.275 1.00 65.51 O
ATOM 4 OP2 C A 9 32.681 -4.763 15.063 1.00 63.34 O
ATOM 5 O5' C A 9 33.420 -6.186 16.965 1.00 64.65 O
ATOM 6 C5' C A 9 34.427 -6.769 16.127 1.00 69.50 C
ATOM 7 C4' C A 9 35.489 -7.493 16.941 1.00 72.18 C
ATOM 8 O4' C A 9 36.021 -6.614 17.973 1.00 73.84 O
ATOM 9 C3' C A 9 35.067 -8.731 17.716 1.00 73.65 C
ATOM 10 O3' C A 9 35.007 -9.881 16.881 1.00 75.28 O
ATOM 11 C2' C A 9 36.198 -8.862 18.732 1.00 73.79 C
ATOM 12 O2' C A 9 37.371 -9.445 18.193 1.00 72.26 O
ATOM 13 C1' C A 9 36.461 -7.396 19.079 1.00 74.72 C
ATOM 14 N1 C A 9 35.732 -6.970 20.289 1.00 75.56 N
ATOM 15 C2 C A 9 36.105 -7.517 21.531 1.00 75.73 C
ATOM 16 O2 C A 9 37.044 -8.333 21.574 1.00 75.58 O
ATOM 17 N3 C A 9 35.435 -7.145 22.647 1.00 75.37 N
ATOM 18 C4 C A 9 34.431 -6.266 22.560 1.00 75.11 C
ATOM 19 N4 C A 9 33.790 -5.934 23.686 1.00 73.99 N
ATOM 20 C5 C A 9 34.035 -5.690 21.312 1.00 75.44 C
ATOM 21 C6 C A 9 34.707 -6.066 20.214 1.00 75.05 C
ATOM 22 P C A 10 33.935 -11.039 17.200 1.00 75.79 P
ATOM 23 OP1 C A 10 34.281 -12.214 16.358 1.00 76.76 O
ATOM 24 OP2 C A 10 32.577 -10.440 17.104 1.00 75.97 O
ATOM 25 O5' C A 10 34.219 -11.440 18.719 1.00 75.56 O
TER
ATOM 1 O3' G B 7 30.952 0.890 19.671 1.00 35.02 O
ATOM 2 P A B 8 30.331 0.073 18.437 1.00 37.89 P
ATOM 3 OP1 A B 8 31.129 0.353 17.215 1.00 37.74 O
ATOM 4 OP2 A B 8 28.865 0.358 18.441 1.00 38.73 O
ATOM 5 O5' A B 8 30.524 -1.457 18.863 1.00 40.54 O
ATOM 6 C5' A B 8 31.800 -2.111 18.809 1.00 42.79 C
ATOM 7 C4' A B 8 31.630 -3.603 19.055 1.00 45.82 C
ATOM 8 O4' A B 8 31.117 -3.776 20.393 1.00 42.48 O
ATOM 9 C3' A B 8 30.622 -4.292 18.131 1.00 48.72 C
ATOM 10 O3' A B 8 31.173 -4.971 16.979 1.00 57.93 O
ATOM 11 C2' A B 8 30.021 -5.396 19.001 1.00 46.52 C
ATOM 12 O2' A B 8 30.662 -6.649 18.853 1.00 49.93 O
ATOM 13 C1' A B 8 30.228 -4.869 20.421 1.00 42.69 C
ATOM 14 N9 A B 8 29.000 -4.456 21.085 1.00 37.77 N
ATOM 15 C8 A B 8 28.318 -3.275 20.966 1.00 34.72 C
ATOM 16 N7 A B 8 27.257 -3.203 21.727 1.00 34.19 N
ATOM 17 C5 A B 8 27.235 -4.425 22.388 1.00 34.03 C
ATOM 18 C6 A B 8 26.357 -4.973 23.341 1.00 32.13 C
ATOM 19 N6 A B 8 25.291 -4.332 23.824 1.00 30.01 N
ATOM 20 N1 A B 8 26.621 -6.221 23.789 1.00 34.28 N
ATOM 21 C2 A B 8 27.697 -6.864 23.306 1.00 33.20 C
ATOM 22 N3 A B 8 28.592 -6.453 22.416 1.00 32.90 N
ATOM 23 C4 A B 8 28.300 -5.210 21.992 1.00 34.94 C
ATOM 24 P C B 9 32.729 -4.803 16.547 1.00 62.85 P
ATOM 25 OP1 C B 9 33.452 -3.723 17.275 1.00 65.51 O
ATOM 26 OP2 C B 9 32.681 -4.763 15.063 1.00 63.34 O
ATOM 27 O5' C B 9 33.420 -6.186 16.965 1.00 64.65 O
TER
ATOM 2 P C A 9 32.729 -4.803 16.547 1.00 62.85 P
ATOM 3 OP1 C A 9 33.452 -3.723 17.275 1.00 65.51 O
ATOM 4 OP2 C A 9 32.681 -4.763 15.063 1.00 63.34 O
ATOM 5 O5' C A 9 33.420 -6.186 16.965 1.00 64.65 O
ATOM 6 C5' C A 9 34.427 -6.769 16.127 1.00 69.50 C
ATOM 7 C4' C A 9 35.489 -7.493 16.941 1.00 72.18 C
ATOM 8 O4' C A 9 36.021 -6.614 17.973 1.00 73.84 O
ATOM 9 C3' C A 9 35.067 -8.731 17.716 1.00 73.65 C
ATOM 10 O3' C A 9 35.007 -9.881 16.881 1.00 75.28 O
ATOM 11 C2' C A 9 36.198 -8.862 18.732 1.00 73.79 C
ATOM 12 O2' C A 9 37.371 -9.445 18.193 1.00 72.26 O
ATOM 13 C1' C A 9 36.461 -7.396 19.079 1.00 74.72 C
ATOM 14 N1 C A 9 35.732 -6.970 20.289 1.00 75.56 N
ATOM 15 C2 C A 9 36.105 -7.517 21.531 1.00 75.73 C
ATOM 16 O2 C A 9 37.044 -8.333 21.574 1.00 75.58 O
ATOM 17 N3 C A 9 35.435 -7.145 22.647 1.00 75.37 N
ATOM 18 C4 C A 9 34.431 -6.266 22.560 1.00 75.11 C
ATOM 19 N4 C A 9 33.790 -5.934 23.686 1.00 73.99 N
ATOM 20 C5 C A 9 34.035 -5.690 21.312 1.00 75.44 C
ATOM 21 C6 C A 9 34.707 -6.066 20.214 1.00 75.05 C
ATOM 22 P C A 10 33.935 -11.039 17.200 1.00 75.79 P
ATOM 23 OP1 C A 10 34.281 -12.214 16.358 1.00 76.76 O
ATOM 24 OP2 C A 10 32.577 -10.440 17.104 1.00 75.97 O
ATOM 25 O5' C A 10 34.219 -11.440 18.719 1.00 75.56 O
TER
ATOM 1 O3' G B 7 30.952 0.890 19.671 1.00 35.02 O
ATOM 2 P A B 8 30.331 0.073 18.437 1.00 37.89 P
ATOM 3 OP1 A B 8 31.129 0.353 17.215 1.00 37.74 O
ATOM 4 OP2 A B 8 28.865 0.358 18.441 1.00 38.73 O
ATOM 5 O5' A B 8 30.524 -1.457 18.863 1.00 40.54 O
ATOM 6 C5' A B 8 31.800 -2.111 18.809 1.00 42.79 C
ATOM 7 C4' A B 8 31.630 -3.603 19.055 1.00 45.82 C
ATOM 8 O4' A B 8 31.117 -3.776 20.393 1.00 42.48 O
ATOM 9 C3' A B 8 30.622 -4.292 18.131 1.00 48.72 C
ATOM 10 O3' A B 8 31.173 -4.971 16.979 1.00 57.93 O
ATOM 11 C2' A B 8 30.021 -5.396 19.001 1.00 46.52 C
ATOM 12 O2' A B 8 30.662 -6.649 18.853 1.00 49.93 O
ATOM 13 C1' A B 8 30.228 -4.869 20.421 1.00 42.69 C
ATOM 14 N9 A B 8 29.000 -4.456 21.085 1.00 37.77 N
ATOM 15 C8 A B 8 28.318 -3.275 20.966 1.00 34.72 C
ATOM 16 N7 A B 8 27.257 -3.203 21.727 1.00 34.19 N
ATOM 17 C5 A B 8 27.235 -4.425 22.388 1.00 34.03 C
ATOM 18 C6 A B 8 26.357 -4.973 23.341 1.00 32.13 C
ATOM 19 N6 A B 8 25.291 -4.332 23.824 1.00 30.01 N
ATOM 20 N1 A B 8 26.621 -6.221 23.789 1.00 34.28 N
ATOM 21 C2 A B 8 27.697 -6.864 23.306 1.00 33.20 C
ATOM 22 N3 A B 8 28.592 -6.453 22.416 1.00 32.90 N
ATOM 23 C4 A B 8 28.300 -5.210 21.992 1.00 34.94 C
ATOM 24 P C B 9 32.729 -4.803 16.547 1.00 62.85 P
ATOM 25 OP1 C B 9 33.452 -3.723 17.275 1.00 65.51 O
ATOM 26 OP2 C B 9 32.681 -4.763 15.063 1.00 63.34 O
ATOM 27 O5' C B 9 33.420 -6.186 16.965 1.00 64.65 O
TER
Atoms:
C2: (36.105,-7.517,21.531)
OP1: (33.452,-3.723,17.275)
OP2: (32.681,-4.763,15.063)
C4: (34.431,-6.266,22.560)
O5': (33.420,-6.186,16.965)
C3': (35.067,-8.731,17.716)
C1': (36.461,-7.396,19.079)
O4': (36.021,-6.614,17.973)
C5': (34.427,-6.769,16.127)
P: (32.729,-4.803,16.547)
O2: (37.044,-8.333,21.574)
C4': (35.489,-7.493,16.941)
C2': (36.198,-8.862,18.732)
O2': (37.371,-9.445,18.193)
N1: (35.732,-6.970,20.289)
N3: (35.435,-7.145,22.647)
N4: (33.790,-5.934,23.686)
C6: (34.707,-6.066,20.214)
C5: (34.035,-5.690,21.312)
O3': (35.007,-9.881,16.881)
OP1: (33.452,-3.723,17.275)
OP2: (32.681,-4.763,15.063)
C4: (34.431,-6.266,22.560)
O5': (33.420,-6.186,16.965)
C3': (35.067,-8.731,17.716)
C1': (36.461,-7.396,19.079)
O4': (36.021,-6.614,17.973)
C5': (34.427,-6.769,16.127)
P: (32.729,-4.803,16.547)
O2: (37.044,-8.333,21.574)
C4': (35.489,-7.493,16.941)
C2': (36.198,-8.862,18.732)
O2': (37.371,-9.445,18.193)
N1: (35.732,-6.970,20.289)
N3: (35.435,-7.145,22.647)
N4: (33.790,-5.934,23.686)
C6: (34.707,-6.066,20.214)
C5: (34.035,-5.690,21.312)
O3': (35.007,-9.881,16.881)
OP1: (31.129,0.353,17.215)
OP2: (28.865,0.358,18.441)
C3': (30.622,-4.292,18.131)
C1': (30.228,-4.869,20.421)
C5': (31.800,-2.111,18.809)
O4': (31.117,-3.776,20.393)
C8: (28.318,-3.275,20.966)
O2': (30.662,-6.649,18.853)
C6: (26.357,-4.973,23.341)
C5: (27.235,-4.425,22.388)
C4: (28.300,-5.210,21.992)
P: (30.331,0.073,18.437)
C4': (31.630,-3.603,19.055)
C2': (30.021,-5.396,19.001)
C2: (27.697,-6.864,23.306)
N1: (26.621,-6.221,23.789)
N3: (28.592,-6.453,22.416)
N6: (25.291,-4.332,23.824)
N7: (27.257,-3.203,21.727)
N9: (29.000,-4.456,21.085)
O5': (30.524,-1.457,18.863)
O3': (31.173,-4.971,16.979)
OP2: (28.865,0.358,18.441)
C3': (30.622,-4.292,18.131)
C1': (30.228,-4.869,20.421)
C5': (31.800,-2.111,18.809)
O4': (31.117,-3.776,20.393)
C8: (28.318,-3.275,20.966)
O2': (30.662,-6.649,18.853)
C6: (26.357,-4.973,23.341)
C5: (27.235,-4.425,22.388)
C4: (28.300,-5.210,21.992)
P: (30.331,0.073,18.437)
C4': (31.630,-3.603,19.055)
C2': (30.021,-5.396,19.001)
C2: (27.697,-6.864,23.306)
N1: (26.621,-6.221,23.789)
N3: (28.592,-6.453,22.416)
N6: (25.291,-4.332,23.824)
N7: (27.257,-3.203,21.727)
N9: (29.000,-4.456,21.085)
O5': (30.524,-1.457,18.863)
O3': (31.173,-4.971,16.979)
Image (generated by PyMOL):