ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ8:01053:01054

Extra

PDB:
ATOM 1 O3' G A1052 4.039 101.943 103.068 1.00 42.29 O
ATOM 2 P G A1053 4.878 101.863 104.442 1.00 44.62 P
ATOM 3 OP1 G A1053 3.906 102.193 105.522 1.00 44.40 O
ATOM 4 OP2 G A1053 6.130 102.662 104.307 1.00 45.66 O
ATOM 5 O5' G A1053 5.319 100.334 104.583 1.00 41.66 O
ATOM 6 C5' G A1053 4.362 99.334 104.923 1.00 40.55 C
ATOM 7 C4' G A1053 4.936 97.941 104.769 1.00 39.39 C
ATOM 8 O4' G A1053 5.575 97.790 103.476 1.00 38.28 O
ATOM 9 C3' G A1053 6.013 97.452 105.722 1.00 37.22 C
ATOM 10 O3' G A1053 5.467 97.099 106.992 1.00 37.36 O
ATOM 11 C2' G A1053 6.480 96.202 104.982 1.00 37.41 C
ATOM 12 O2' G A1053 5.538 95.151 105.038 1.00 36.94 O
ATOM 13 C1' G A1053 6.473 96.691 103.535 1.00 37.30 C
ATOM 14 N9 G A1053 7.802 97.112 103.100 1.00 37.25 N
ATOM 15 C8 G A1053 8.245 98.387 102.840 1.00 35.86 C
ATOM 16 N7 G A1053 9.499 98.426 102.475 1.00 37.05 N
ATOM 17 C5 G A1053 9.906 97.098 102.491 1.00 36.69 C
ATOM 18 C6 G A1053 11.169 96.513 102.187 1.00 37.45 C
ATOM 19 O6 G A1053 12.209 97.070 101.807 1.00 39.75 O
ATOM 20 N1 G A1053 11.148 95.132 102.356 1.00 36.97 N
ATOM 21 C2 G A1053 10.053 94.404 102.753 1.00 36.71 C
ATOM 22 N2 G A1053 10.227 93.084 102.865 1.00 34.59 N
ATOM 23 N3 G A1053 8.871 94.934 103.023 1.00 37.08 N
ATOM 24 C4 G A1053 8.871 96.277 102.875 1.00 36.55 C
ATOM 25 P U A1054 6.386 97.167 108.318 1.00 38.27 P
ATOM 26 OP1 U A1054 5.515 96.771 109.461 1.00 39.48 O
ATOM 27 OP2 U A1054 7.098 98.477 108.363 1.00 39.10 O
ATOM 28 O5' U A1054 7.450 95.998 108.127 1.00 35.63 O
TER

ATOM 1 O3' G B1053 5.467 97.099 106.992 1.00 37.36 O
ATOM 2 P U B1054 6.386 97.167 108.318 1.00 38.27 P
ATOM 3 OP1 U B1054 5.515 96.771 109.461 1.00 39.48 O
ATOM 4 OP2 U B1054 7.098 98.477 108.363 1.00 39.10 O
ATOM 5 O5' U B1054 7.450 95.998 108.127 1.00 35.63 O
ATOM 6 C5' U B1054 7.043 94.626 108.224 1.00 37.31 C
ATOM 7 C4' U B1054 8.218 93.698 108.014 1.00 38.00 C
ATOM 8 O4' U B1054 8.729 93.830 106.662 1.00 40.18 O
ATOM 9 C3' U B1054 9.442 93.916 108.883 1.00 36.04 C
ATOM 10 O3' U B1054 9.251 93.358 110.170 1.00 38.11 O
ATOM 11 C2' U B1054 10.514 93.190 108.085 1.00 36.87 C
ATOM 12 O2' U B1054 10.440 91.787 108.214 1.00 36.56 O
ATOM 13 C1' U B1054 10.123 93.560 106.655 1.00 37.77 C
ATOM 14 N1 U B1054 10.832 94.749 106.156 1.00 37.37 N
ATOM 15 C2 U B1054 12.064 94.559 105.551 1.00 36.37 C
ATOM 16 O2 U B1054 12.587 93.459 105.426 1.00 35.02 O
ATOM 17 N3 U B1054 12.668 95.704 105.099 1.00 37.66 N
ATOM 18 C4 U B1054 12.185 96.994 105.198 1.00 38.52 C
ATOM 19 O4 U B1054 12.864 97.928 104.769 1.00 39.34 O
ATOM 20 C5 U B1054 10.911 97.107 105.839 1.00 38.40 C
ATOM 21 C6 U B1054 10.294 96.009 106.282 1.00 37.71 C
ATOM 22 P U B1055 10.376 93.537 111.301 1.00 39.33 P
ATOM 23 OP1 U B1055 9.823 92.952 112.555 1.00 41.56 O
ATOM 24 OP2 U B1055 10.850 94.948 111.304 1.00 43.26 O
ATOM 25 O5' U B1055 11.542 92.587 110.781 1.00 40.29 O
TER

Atoms:
OP1: (3.906,102.193,105.522)
OP2: (6.130,102.662,104.307)
C3': (6.013,97.452,105.722)
C1': (6.473,96.691,103.535)
C5': (4.362,99.334,104.923)
O6: (12.209,97.070,101.807)
O4': (5.575,97.790,103.476)
C8: (8.245,98.387,102.840)
C2: (10.053,94.404,102.753)
C6: (11.169,96.513,102.187)
C5: (9.906,97.098,102.491)
C4: (8.871,96.277,102.875)
P: (4.878,101.863,104.442)
C4': (4.936,97.941,104.769)
C2': (6.480,96.202,104.982)
O2': (5.538,95.151,105.038)
N1: (11.148,95.132,102.356)
N2: (10.227,93.084,102.865)
N3: (8.871,94.934,103.023)
N7: (9.499,98.426,102.475)
N9: (7.802,97.112,103.100)
O5': (5.319,100.334,104.583)
O3': (5.467,97.099,106.992)
C4: (12.185,96.994,105.198)
N3: (12.668,95.704,105.099)
OP1: (5.515,96.771,109.461)
OP2: (7.098,98.477,108.363)
C2: (12.064,94.559,105.551)
C1': (10.123,93.560,106.655)
C3': (9.442,93.916,108.883)
O5': (7.450,95.998,108.127)
O4': (8.729,93.830,106.662)
C5': (7.043,94.626,108.224)
P: (6.386,97.167,108.318)
C4': (8.218,93.698,108.014)
C2': (10.514,93.190,108.085)
O2': (10.440,91.787,108.214)
N1: (10.832,94.749,106.156)
O4: (12.864,97.928,104.769)
O2: (12.587,93.459,105.426)
C6: (10.294,96.009,106.282)
C5: (10.911,97.107,105.839)
O3': (9.251,93.358,110.170)
Image (generated by PyMOL):
PyMOL image
show in jmol