Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01520:01518
Extra
PDB:
ATOM 1 P C A1520 83.767 210.518 104.896 1.00 83.07 P
ATOM 2 OP1 C A1520 84.362 211.879 104.840 1.00 83.71 O
ATOM 3 OP2 C A1520 83.211 209.917 103.654 1.00 83.56 O
ATOM 4 O5' C A1520 84.872 209.533 105.487 1.00 81.67 O
ATOM 5 C5' C A1520 86.108 209.339 104.780 1.00 81.29 C
ATOM 6 C4' C A1520 86.599 207.924 104.943 1.00 80.67 C
ATOM 7 O4' C A1520 85.490 207.017 105.137 1.00 81.34 O
ATOM 8 C3' C A1520 87.329 207.403 103.721 1.00 80.64 C
ATOM 9 O3' C A1520 88.697 207.787 103.775 1.00 80.87 O
ATOM 10 C2' C A1520 87.151 205.896 103.837 1.00 80.57 C
ATOM 11 O2' C A1520 88.101 205.310 104.703 1.00 80.62 O
ATOM 12 C1' C A1520 85.755 205.793 104.470 1.00 81.28 C
ATOM 13 N1 C A1520 84.614 205.489 103.573 1.00 81.57 N
ATOM 14 C2 C A1520 84.738 204.476 102.603 1.00 81.10 C
ATOM 15 O2 C A1520 85.814 203.865 102.494 1.00 81.74 O
ATOM 16 N3 C A1520 83.676 204.190 101.812 1.00 80.28 N
ATOM 17 C4 C A1520 82.532 204.864 101.956 1.00 79.88 C
ATOM 18 N4 C A1520 81.511 204.541 101.163 1.00 79.38 N
ATOM 19 C5 C A1520 82.382 205.896 102.921 1.00 80.71 C
ATOM 20 C6 C A1520 83.436 206.176 103.697 1.00 81.40 C
ATOM 21 P G A1521 89.290 208.804 102.682 1.00 80.86 P
ATOM 22 OP1 G A1521 90.550 209.354 103.252 1.00 80.54 O
ATOM 23 OP2 G A1521 88.209 209.732 102.249 1.00 79.63 O
ATOM 24 O5' G A1521 89.676 207.867 101.452 1.00 80.09 O
TER
ATOM 1 O3' C B1517 75.943 201.968 98.021 1.00 69.14 O
ATOM 2 P A B1518 74.835 202.876 98.741 1.00 69.31 P
ATOM 3 OP1 A B1518 73.595 202.083 98.897 1.00 69.86 O
ATOM 4 OP2 A B1518 74.776 204.194 98.063 1.00 70.25 O
ATOM 5 O5' A B1518 75.427 203.087 100.197 1.00 70.60 O
ATOM 6 C5' A B1518 75.132 204.282 100.920 1.00 74.31 C
ATOM 7 C4' A B1518 76.406 205.019 101.228 1.00 73.67 C
ATOM 8 O4' A B1518 77.275 205.011 100.062 1.00 73.29 O
ATOM 9 C3' A B1518 76.219 206.487 101.559 1.00 72.03 C
ATOM 10 O3' A B1518 75.789 206.662 102.908 1.00 67.38 O
ATOM 11 C2' A B1518 77.602 207.051 101.234 1.00 72.37 C
ATOM 12 O2' A B1518 78.576 206.771 102.217 1.00 71.93 O
ATOM 13 C1' A B1518 77.973 206.243 99.986 1.00 74.12 C
ATOM 14 N9 A B1518 77.623 206.902 98.725 1.00 76.73 N
ATOM 15 C8 A B1518 76.580 206.611 97.877 1.00 77.74 C
ATOM 16 N7 A B1518 76.516 207.392 96.825 1.00 78.20 N
ATOM 17 C5 A B1518 77.590 208.256 96.987 1.00 78.75 C
ATOM 18 C6 A B1518 78.069 209.326 96.208 1.00 79.32 C
ATOM 19 N6 A B1518 77.498 209.726 95.067 1.00 78.52 N
ATOM 20 N1 A B1518 79.168 209.982 96.647 1.00 79.56 N
ATOM 21 C2 A B1518 79.737 209.583 97.793 1.00 79.76 C
ATOM 22 N3 A B1518 79.378 208.595 98.615 1.00 80.11 N
ATOM 23 C4 A B1518 78.285 207.963 98.150 1.00 78.52 C
TER
ATOM 2 OP1 C A1520 84.362 211.879 104.840 1.00 83.71 O
ATOM 3 OP2 C A1520 83.211 209.917 103.654 1.00 83.56 O
ATOM 4 O5' C A1520 84.872 209.533 105.487 1.00 81.67 O
ATOM 5 C5' C A1520 86.108 209.339 104.780 1.00 81.29 C
ATOM 6 C4' C A1520 86.599 207.924 104.943 1.00 80.67 C
ATOM 7 O4' C A1520 85.490 207.017 105.137 1.00 81.34 O
ATOM 8 C3' C A1520 87.329 207.403 103.721 1.00 80.64 C
ATOM 9 O3' C A1520 88.697 207.787 103.775 1.00 80.87 O
ATOM 10 C2' C A1520 87.151 205.896 103.837 1.00 80.57 C
ATOM 11 O2' C A1520 88.101 205.310 104.703 1.00 80.62 O
ATOM 12 C1' C A1520 85.755 205.793 104.470 1.00 81.28 C
ATOM 13 N1 C A1520 84.614 205.489 103.573 1.00 81.57 N
ATOM 14 C2 C A1520 84.738 204.476 102.603 1.00 81.10 C
ATOM 15 O2 C A1520 85.814 203.865 102.494 1.00 81.74 O
ATOM 16 N3 C A1520 83.676 204.190 101.812 1.00 80.28 N
ATOM 17 C4 C A1520 82.532 204.864 101.956 1.00 79.88 C
ATOM 18 N4 C A1520 81.511 204.541 101.163 1.00 79.38 N
ATOM 19 C5 C A1520 82.382 205.896 102.921 1.00 80.71 C
ATOM 20 C6 C A1520 83.436 206.176 103.697 1.00 81.40 C
ATOM 21 P G A1521 89.290 208.804 102.682 1.00 80.86 P
ATOM 22 OP1 G A1521 90.550 209.354 103.252 1.00 80.54 O
ATOM 23 OP2 G A1521 88.209 209.732 102.249 1.00 79.63 O
ATOM 24 O5' G A1521 89.676 207.867 101.452 1.00 80.09 O
TER
ATOM 1 O3' C B1517 75.943 201.968 98.021 1.00 69.14 O
ATOM 2 P A B1518 74.835 202.876 98.741 1.00 69.31 P
ATOM 3 OP1 A B1518 73.595 202.083 98.897 1.00 69.86 O
ATOM 4 OP2 A B1518 74.776 204.194 98.063 1.00 70.25 O
ATOM 5 O5' A B1518 75.427 203.087 100.197 1.00 70.60 O
ATOM 6 C5' A B1518 75.132 204.282 100.920 1.00 74.31 C
ATOM 7 C4' A B1518 76.406 205.019 101.228 1.00 73.67 C
ATOM 8 O4' A B1518 77.275 205.011 100.062 1.00 73.29 O
ATOM 9 C3' A B1518 76.219 206.487 101.559 1.00 72.03 C
ATOM 10 O3' A B1518 75.789 206.662 102.908 1.00 67.38 O
ATOM 11 C2' A B1518 77.602 207.051 101.234 1.00 72.37 C
ATOM 12 O2' A B1518 78.576 206.771 102.217 1.00 71.93 O
ATOM 13 C1' A B1518 77.973 206.243 99.986 1.00 74.12 C
ATOM 14 N9 A B1518 77.623 206.902 98.725 1.00 76.73 N
ATOM 15 C8 A B1518 76.580 206.611 97.877 1.00 77.74 C
ATOM 16 N7 A B1518 76.516 207.392 96.825 1.00 78.20 N
ATOM 17 C5 A B1518 77.590 208.256 96.987 1.00 78.75 C
ATOM 18 C6 A B1518 78.069 209.326 96.208 1.00 79.32 C
ATOM 19 N6 A B1518 77.498 209.726 95.067 1.00 78.52 N
ATOM 20 N1 A B1518 79.168 209.982 96.647 1.00 79.56 N
ATOM 21 C2 A B1518 79.737 209.583 97.793 1.00 79.76 C
ATOM 22 N3 A B1518 79.378 208.595 98.615 1.00 80.11 N
ATOM 23 C4 A B1518 78.285 207.963 98.150 1.00 78.52 C
TER
Atoms:
C2: (84.738,204.476,102.603)
OP1: (84.362,211.879,104.840)
OP2: (83.211,209.917,103.654)
C4: (82.532,204.864,101.956)
O5': (84.872,209.533,105.487)
C3': (87.329,207.403,103.721)
C1': (85.755,205.793,104.470)
O4': (85.490,207.017,105.137)
C5': (86.108,209.339,104.780)
P: (83.767,210.518,104.896)
O2: (85.814,203.865,102.494)
C4': (86.599,207.924,104.943)
C2': (87.151,205.896,103.837)
O2': (88.101,205.310,104.703)
N1: (84.614,205.489,103.573)
N3: (83.676,204.190,101.812)
N4: (81.511,204.541,101.163)
C6: (83.436,206.176,103.697)
C5: (82.382,205.896,102.921)
O3': (88.697,207.787,103.775)
OP1: (84.362,211.879,104.840)
OP2: (83.211,209.917,103.654)
C4: (82.532,204.864,101.956)
O5': (84.872,209.533,105.487)
C3': (87.329,207.403,103.721)
C1': (85.755,205.793,104.470)
O4': (85.490,207.017,105.137)
C5': (86.108,209.339,104.780)
P: (83.767,210.518,104.896)
O2: (85.814,203.865,102.494)
C4': (86.599,207.924,104.943)
C2': (87.151,205.896,103.837)
O2': (88.101,205.310,104.703)
N1: (84.614,205.489,103.573)
N3: (83.676,204.190,101.812)
N4: (81.511,204.541,101.163)
C6: (83.436,206.176,103.697)
C5: (82.382,205.896,102.921)
O3': (88.697,207.787,103.775)
OP1: (73.595,202.083,98.897)
OP2: (74.776,204.194,98.063)
C3': (76.219,206.487,101.559)
C1': (77.973,206.243,99.986)
C5': (75.132,204.282,100.920)
O4': (77.275,205.011,100.062)
C8: (76.580,206.611,97.877)
O2': (78.576,206.771,102.217)
C6: (78.069,209.326,96.208)
C5: (77.590,208.256,96.987)
C4: (78.285,207.963,98.150)
P: (74.835,202.876,98.741)
C4': (76.406,205.019,101.228)
C2': (77.602,207.051,101.234)
C2: (79.737,209.583,97.793)
N1: (79.168,209.982,96.647)
N3: (79.378,208.595,98.615)
N6: (77.498,209.726,95.067)
N7: (76.516,207.392,96.825)
N9: (77.623,206.902,98.725)
O5': (75.427,203.087,100.197)
O3': (75.789,206.662,102.908)
OP2: (74.776,204.194,98.063)
C3': (76.219,206.487,101.559)
C1': (77.973,206.243,99.986)
C5': (75.132,204.282,100.920)
O4': (77.275,205.011,100.062)
C8: (76.580,206.611,97.877)
O2': (78.576,206.771,102.217)
C6: (78.069,209.326,96.208)
C5: (77.590,208.256,96.987)
C4: (78.285,207.963,98.150)
P: (74.835,202.876,98.741)
C4': (76.406,205.019,101.228)
C2': (77.602,207.051,101.234)
C2: (79.737,209.583,97.793)
N1: (79.168,209.982,96.647)
N3: (79.378,208.595,98.615)
N6: (77.498,209.726,95.067)
N7: (76.516,207.392,96.825)
N9: (77.623,206.902,98.725)
O5': (75.427,203.087,100.197)
O3': (75.789,206.662,102.908)
Image (generated by PyMOL):