Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01928:01927
Extra
PDB:
ATOM 1 O3' A A1927 96.470 115.877 109.493 1.00 53.67 O
ATOM 2 P C A1928 94.913 116.268 109.473 1.00 56.04 P
ATOM 3 OP1 C A1928 94.559 116.708 108.096 1.00 56.32 O
ATOM 4 OP2 C A1928 94.665 117.179 110.623 1.00 55.68 O
ATOM 5 O5' C A1928 94.198 114.876 109.779 1.00 54.63 O
ATOM 6 C5' C A1928 92.974 114.480 109.120 1.00 52.66 C
ATOM 7 C4' C A1928 92.695 113.019 109.396 1.00 52.73 C
ATOM 8 O4' C A1928 93.757 112.222 108.813 1.00 53.21 O
ATOM 9 C3' C A1928 92.694 112.643 110.870 1.00 52.62 C
ATOM 10 O3' C A1928 91.411 112.830 111.443 1.00 52.89 O
ATOM 11 C2' C A1928 93.107 111.179 110.850 1.00 52.84 C
ATOM 12 O2' C A1928 92.047 110.308 110.530 1.00 54.00 O
ATOM 13 C1' C A1928 94.105 111.165 109.692 1.00 52.76 C
ATOM 14 N1 C A1928 95.519 111.328 110.081 1.00 53.52 N
ATOM 15 C2 C A1928 96.114 110.364 110.903 1.00 54.59 C
ATOM 16 O2 C A1928 95.419 109.430 111.338 1.00 55.26 O
ATOM 17 N3 C A1928 97.431 110.478 111.207 1.00 54.64 N
ATOM 18 C4 C A1928 98.139 111.507 110.733 1.00 53.86 C
ATOM 19 N4 C A1928 99.436 111.566 111.029 1.00 54.11 N
ATOM 20 C5 C A1928 97.549 112.517 109.927 1.00 54.44 C
ATOM 21 C6 C A1928 96.252 112.391 109.629 1.00 54.16 C
ATOM 22 P C A1929 91.252 113.736 112.754 1.00 55.28 P
ATOM 23 OP1 C A1929 89.811 113.780 113.128 1.00 55.42 O
ATOM 24 OP2 C A1929 91.983 115.007 112.505 1.00 55.44 O
ATOM 25 O5' C A1929 92.008 112.904 113.879 1.00 54.98 O
TER
ATOM 1 O3' U B1926 98.348 117.540 103.479 1.00 50.54 O
ATOM 2 P A B1927 97.170 116.727 104.217 1.00 50.09 P
ATOM 3 OP1 A B1927 97.417 115.289 103.951 1.00 49.23 O
ATOM 4 OP2 A B1927 95.856 117.331 103.857 1.00 48.66 O
ATOM 5 O5' A B1927 97.418 116.975 105.767 1.00 50.37 O
ATOM 6 C5' A B1927 98.522 116.356 106.438 1.00 51.81 C
ATOM 7 C4' A B1927 98.052 115.695 107.709 1.00 52.84 C
ATOM 8 O4' A B1927 99.203 115.112 108.380 1.00 53.61 O
ATOM 9 C3' A B1927 97.403 116.626 108.725 1.00 52.64 C
ATOM 10 O3' A B1927 96.470 115.877 109.493 1.00 53.67 O
ATOM 11 C2' A B1927 98.586 117.037 109.592 1.00 53.11 C
ATOM 12 O2' A B1927 98.195 117.434 110.891 1.00 54.37 O
ATOM 13 C1' A B1927 99.402 115.743 109.627 1.00 53.87 C
ATOM 14 N9 A B1927 100.840 115.963 109.788 1.00 55.75 N
ATOM 15 C8 A B1927 101.695 116.614 108.928 1.00 55.48 C
ATOM 16 N7 A B1927 102.934 116.663 109.350 1.00 55.59 N
ATOM 17 C5 A B1927 102.899 115.996 110.567 1.00 56.36 C
ATOM 18 C6 A B1927 103.895 115.704 111.512 1.00 56.34 C
ATOM 19 N6 A B1927 105.172 116.069 111.380 1.00 55.69 N
ATOM 20 N1 A B1927 103.531 115.015 112.615 1.00 57.46 N
ATOM 21 C2 A B1927 102.246 114.654 112.754 1.00 57.35 C
ATOM 22 N3 A B1927 101.217 114.874 111.939 1.00 57.41 N
ATOM 23 C4 A B1927 101.615 115.556 110.849 1.00 57.03 C
ATOM 24 P C B1928 94.913 116.268 109.473 1.00 56.04 P
ATOM 25 OP1 C B1928 94.559 116.708 108.096 1.00 56.32 O
ATOM 26 OP2 C B1928 94.665 117.179 110.623 1.00 55.68 O
ATOM 27 O5' C B1928 94.198 114.876 109.779 1.00 54.63 O
TER
ATOM 2 P C A1928 94.913 116.268 109.473 1.00 56.04 P
ATOM 3 OP1 C A1928 94.559 116.708 108.096 1.00 56.32 O
ATOM 4 OP2 C A1928 94.665 117.179 110.623 1.00 55.68 O
ATOM 5 O5' C A1928 94.198 114.876 109.779 1.00 54.63 O
ATOM 6 C5' C A1928 92.974 114.480 109.120 1.00 52.66 C
ATOM 7 C4' C A1928 92.695 113.019 109.396 1.00 52.73 C
ATOM 8 O4' C A1928 93.757 112.222 108.813 1.00 53.21 O
ATOM 9 C3' C A1928 92.694 112.643 110.870 1.00 52.62 C
ATOM 10 O3' C A1928 91.411 112.830 111.443 1.00 52.89 O
ATOM 11 C2' C A1928 93.107 111.179 110.850 1.00 52.84 C
ATOM 12 O2' C A1928 92.047 110.308 110.530 1.00 54.00 O
ATOM 13 C1' C A1928 94.105 111.165 109.692 1.00 52.76 C
ATOM 14 N1 C A1928 95.519 111.328 110.081 1.00 53.52 N
ATOM 15 C2 C A1928 96.114 110.364 110.903 1.00 54.59 C
ATOM 16 O2 C A1928 95.419 109.430 111.338 1.00 55.26 O
ATOM 17 N3 C A1928 97.431 110.478 111.207 1.00 54.64 N
ATOM 18 C4 C A1928 98.139 111.507 110.733 1.00 53.86 C
ATOM 19 N4 C A1928 99.436 111.566 111.029 1.00 54.11 N
ATOM 20 C5 C A1928 97.549 112.517 109.927 1.00 54.44 C
ATOM 21 C6 C A1928 96.252 112.391 109.629 1.00 54.16 C
ATOM 22 P C A1929 91.252 113.736 112.754 1.00 55.28 P
ATOM 23 OP1 C A1929 89.811 113.780 113.128 1.00 55.42 O
ATOM 24 OP2 C A1929 91.983 115.007 112.505 1.00 55.44 O
ATOM 25 O5' C A1929 92.008 112.904 113.879 1.00 54.98 O
TER
ATOM 1 O3' U B1926 98.348 117.540 103.479 1.00 50.54 O
ATOM 2 P A B1927 97.170 116.727 104.217 1.00 50.09 P
ATOM 3 OP1 A B1927 97.417 115.289 103.951 1.00 49.23 O
ATOM 4 OP2 A B1927 95.856 117.331 103.857 1.00 48.66 O
ATOM 5 O5' A B1927 97.418 116.975 105.767 1.00 50.37 O
ATOM 6 C5' A B1927 98.522 116.356 106.438 1.00 51.81 C
ATOM 7 C4' A B1927 98.052 115.695 107.709 1.00 52.84 C
ATOM 8 O4' A B1927 99.203 115.112 108.380 1.00 53.61 O
ATOM 9 C3' A B1927 97.403 116.626 108.725 1.00 52.64 C
ATOM 10 O3' A B1927 96.470 115.877 109.493 1.00 53.67 O
ATOM 11 C2' A B1927 98.586 117.037 109.592 1.00 53.11 C
ATOM 12 O2' A B1927 98.195 117.434 110.891 1.00 54.37 O
ATOM 13 C1' A B1927 99.402 115.743 109.627 1.00 53.87 C
ATOM 14 N9 A B1927 100.840 115.963 109.788 1.00 55.75 N
ATOM 15 C8 A B1927 101.695 116.614 108.928 1.00 55.48 C
ATOM 16 N7 A B1927 102.934 116.663 109.350 1.00 55.59 N
ATOM 17 C5 A B1927 102.899 115.996 110.567 1.00 56.36 C
ATOM 18 C6 A B1927 103.895 115.704 111.512 1.00 56.34 C
ATOM 19 N6 A B1927 105.172 116.069 111.380 1.00 55.69 N
ATOM 20 N1 A B1927 103.531 115.015 112.615 1.00 57.46 N
ATOM 21 C2 A B1927 102.246 114.654 112.754 1.00 57.35 C
ATOM 22 N3 A B1927 101.217 114.874 111.939 1.00 57.41 N
ATOM 23 C4 A B1927 101.615 115.556 110.849 1.00 57.03 C
ATOM 24 P C B1928 94.913 116.268 109.473 1.00 56.04 P
ATOM 25 OP1 C B1928 94.559 116.708 108.096 1.00 56.32 O
ATOM 26 OP2 C B1928 94.665 117.179 110.623 1.00 55.68 O
ATOM 27 O5' C B1928 94.198 114.876 109.779 1.00 54.63 O
TER
Atoms:
C2: (96.114,110.364,110.903)
OP1: (94.559,116.708,108.096)
OP2: (94.665,117.179,110.623)
C4: (98.139,111.507,110.733)
O5': (94.198,114.876,109.779)
C3': (92.694,112.643,110.870)
C1': (94.105,111.165,109.692)
O4': (93.757,112.222,108.813)
C5': (92.974,114.480,109.120)
P: (94.913,116.268,109.473)
O2: (95.419,109.430,111.338)
C4': (92.695,113.019,109.396)
C2': (93.107,111.179,110.850)
O2': (92.047,110.308,110.530)
N1: (95.519,111.328,110.081)
N3: (97.431,110.478,111.207)
N4: (99.436,111.566,111.029)
C6: (96.252,112.391,109.629)
C5: (97.549,112.517,109.927)
O3': (91.411,112.830,111.443)
OP1: (94.559,116.708,108.096)
OP2: (94.665,117.179,110.623)
C4: (98.139,111.507,110.733)
O5': (94.198,114.876,109.779)
C3': (92.694,112.643,110.870)
C1': (94.105,111.165,109.692)
O4': (93.757,112.222,108.813)
C5': (92.974,114.480,109.120)
P: (94.913,116.268,109.473)
O2: (95.419,109.430,111.338)
C4': (92.695,113.019,109.396)
C2': (93.107,111.179,110.850)
O2': (92.047,110.308,110.530)
N1: (95.519,111.328,110.081)
N3: (97.431,110.478,111.207)
N4: (99.436,111.566,111.029)
C6: (96.252,112.391,109.629)
C5: (97.549,112.517,109.927)
O3': (91.411,112.830,111.443)
OP1: (97.417,115.289,103.951)
OP2: (95.856,117.331,103.857)
C3': (97.403,116.626,108.725)
C1': (99.402,115.743,109.627)
C5': (98.522,116.356,106.438)
O4': (99.203,115.112,108.380)
C8: (101.695,116.614,108.928)
O2': (98.195,117.434,110.891)
C6: (103.895,115.704,111.512)
C5: (102.899,115.996,110.567)
C4: (101.615,115.556,110.849)
P: (97.170,116.727,104.217)
C4': (98.052,115.695,107.709)
C2': (98.586,117.037,109.592)
C2: (102.246,114.654,112.754)
N1: (103.531,115.015,112.615)
N3: (101.217,114.874,111.939)
N6: (105.172,116.069,111.380)
N7: (102.934,116.663,109.350)
N9: (100.840,115.963,109.788)
O5': (97.418,116.975,105.767)
O3': (96.470,115.877,109.493)
OP2: (95.856,117.331,103.857)
C3': (97.403,116.626,108.725)
C1': (99.402,115.743,109.627)
C5': (98.522,116.356,106.438)
O4': (99.203,115.112,108.380)
C8: (101.695,116.614,108.928)
O2': (98.195,117.434,110.891)
C6: (103.895,115.704,111.512)
C5: (102.899,115.996,110.567)
C4: (101.615,115.556,110.849)
P: (97.170,116.727,104.217)
C4': (98.052,115.695,107.709)
C2': (98.586,117.037,109.592)
C2: (102.246,114.654,112.754)
N1: (103.531,115.015,112.615)
N3: (101.217,114.874,111.939)
N6: (105.172,116.069,111.380)
N7: (102.934,116.663,109.350)
N9: (100.840,115.963,109.788)
O5': (97.418,116.975,105.767)
O3': (96.470,115.877,109.493)
Image (generated by PyMOL):