Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02742:02741
Extra
PDB:
ATOM 1 O3' A A2741 38.928 194.394 123.377 1.00 67.87 O
ATOM 2 P C A2742 39.241 195.958 123.182 1.00 69.66 P
ATOM 3 OP1 C A2742 39.648 196.527 124.496 1.00 68.56 O
ATOM 4 OP2 C A2742 38.110 196.571 122.427 1.00 67.95 O
ATOM 5 O5' C A2742 40.532 195.954 122.249 1.00 67.41 O
ATOM 6 C5' C A2742 40.902 197.113 121.484 1.00 66.85 C
ATOM 7 C4' C A2742 41.867 196.724 120.392 1.00 66.31 C
ATOM 8 O4' C A2742 43.087 196.223 120.997 1.00 66.48 O
ATOM 9 C3' C A2742 41.402 195.588 119.494 1.00 65.32 C
ATOM 10 O3' C A2742 40.544 196.049 118.457 1.00 64.99 O
ATOM 11 C2' C A2742 42.718 195.028 118.976 1.00 65.71 C
ATOM 12 O2' C A2742 43.274 195.809 117.940 1.00 64.73 O
ATOM 13 C1' C A2742 43.599 195.149 120.222 1.00 66.49 C
ATOM 14 N1 C A2742 43.630 193.935 121.069 1.00 66.72 N
ATOM 15 C2 C A2742 44.693 193.025 120.919 1.00 66.68 C
ATOM 16 O2 C A2742 45.560 193.241 120.053 1.00 67.40 O
ATOM 17 N3 C A2742 44.746 191.932 121.719 1.00 65.65 N
ATOM 18 C4 C A2742 43.792 191.725 122.630 1.00 66.03 C
ATOM 19 N4 C A2742 43.894 190.643 123.408 1.00 64.55 N
ATOM 20 C5 C A2742 42.691 192.619 122.789 1.00 66.75 C
ATOM 21 C6 C A2742 42.650 193.700 121.997 1.00 66.68 C
ATOM 22 P U A2743 39.500 195.035 117.775 1.00 66.47 P
ATOM 23 OP1 U A2743 38.688 195.777 116.772 1.00 66.14 O
ATOM 24 OP2 U A2743 38.815 194.280 118.859 1.00 65.79 O
ATOM 25 O5' U A2743 40.444 194.027 116.985 1.00 67.97 O
TER
ATOM 1 O3' C B2740 43.081 194.467 128.838 1.00 66.96 O
ATOM 2 P A B2741 41.482 194.300 128.922 1.00 68.45 P
ATOM 3 OP1 A B2741 40.907 195.668 128.889 1.00 67.41 O
ATOM 4 OP2 A B2741 41.153 193.387 130.052 1.00 68.07 O
ATOM 5 O5' A B2741 41.086 193.559 127.568 1.00 67.86 O
ATOM 6 C5' A B2741 39.817 193.800 126.945 1.00 66.60 C
ATOM 7 C4' A B2741 39.941 193.680 125.447 1.00 66.55 C
ATOM 8 O4' A B2741 40.411 192.343 125.116 1.00 66.23 O
ATOM 9 C3' A B2741 38.636 193.873 124.672 1.00 66.73 C
ATOM 10 O3' A B2741 38.928 194.394 123.377 1.00 67.87 O
ATOM 11 C2' A B2741 38.152 192.436 124.503 1.00 66.27 C
ATOM 12 O2' A B2741 37.261 192.272 123.417 1.00 64.96 O
ATOM 13 C1' A B2741 39.482 191.729 124.246 1.00 67.09 C
ATOM 14 N9 A B2741 39.514 190.282 124.454 1.00 66.28 N
ATOM 15 C8 A B2741 40.009 189.358 123.571 1.00 65.58 C
ATOM 16 N7 A B2741 39.918 188.122 123.991 1.00 66.67 N
ATOM 17 C5 A B2741 39.324 188.237 125.239 1.00 66.67 C
ATOM 18 C6 A B2741 38.955 187.281 126.198 1.00 67.00 C
ATOM 19 N6 A B2741 39.137 185.971 126.040 1.00 66.44 N
ATOM 20 N1 A B2741 38.384 187.723 127.339 1.00 67.21 N
ATOM 21 C2 A B2741 38.196 189.040 127.489 1.00 66.78 C
ATOM 22 N3 A B2741 38.499 190.037 126.658 1.00 66.65 N
ATOM 23 C4 A B2741 39.069 189.562 125.538 1.00 66.38 C
ATOM 24 P C B2742 39.241 195.958 123.182 1.00 69.66 P
ATOM 25 OP1 C B2742 39.648 196.527 124.496 1.00 68.56 O
ATOM 26 OP2 C B2742 38.110 196.571 122.427 1.00 67.95 O
ATOM 27 O5' C B2742 40.532 195.954 122.249 1.00 67.41 O
TER
ATOM 2 P C A2742 39.241 195.958 123.182 1.00 69.66 P
ATOM 3 OP1 C A2742 39.648 196.527 124.496 1.00 68.56 O
ATOM 4 OP2 C A2742 38.110 196.571 122.427 1.00 67.95 O
ATOM 5 O5' C A2742 40.532 195.954 122.249 1.00 67.41 O
ATOM 6 C5' C A2742 40.902 197.113 121.484 1.00 66.85 C
ATOM 7 C4' C A2742 41.867 196.724 120.392 1.00 66.31 C
ATOM 8 O4' C A2742 43.087 196.223 120.997 1.00 66.48 O
ATOM 9 C3' C A2742 41.402 195.588 119.494 1.00 65.32 C
ATOM 10 O3' C A2742 40.544 196.049 118.457 1.00 64.99 O
ATOM 11 C2' C A2742 42.718 195.028 118.976 1.00 65.71 C
ATOM 12 O2' C A2742 43.274 195.809 117.940 1.00 64.73 O
ATOM 13 C1' C A2742 43.599 195.149 120.222 1.00 66.49 C
ATOM 14 N1 C A2742 43.630 193.935 121.069 1.00 66.72 N
ATOM 15 C2 C A2742 44.693 193.025 120.919 1.00 66.68 C
ATOM 16 O2 C A2742 45.560 193.241 120.053 1.00 67.40 O
ATOM 17 N3 C A2742 44.746 191.932 121.719 1.00 65.65 N
ATOM 18 C4 C A2742 43.792 191.725 122.630 1.00 66.03 C
ATOM 19 N4 C A2742 43.894 190.643 123.408 1.00 64.55 N
ATOM 20 C5 C A2742 42.691 192.619 122.789 1.00 66.75 C
ATOM 21 C6 C A2742 42.650 193.700 121.997 1.00 66.68 C
ATOM 22 P U A2743 39.500 195.035 117.775 1.00 66.47 P
ATOM 23 OP1 U A2743 38.688 195.777 116.772 1.00 66.14 O
ATOM 24 OP2 U A2743 38.815 194.280 118.859 1.00 65.79 O
ATOM 25 O5' U A2743 40.444 194.027 116.985 1.00 67.97 O
TER
ATOM 1 O3' C B2740 43.081 194.467 128.838 1.00 66.96 O
ATOM 2 P A B2741 41.482 194.300 128.922 1.00 68.45 P
ATOM 3 OP1 A B2741 40.907 195.668 128.889 1.00 67.41 O
ATOM 4 OP2 A B2741 41.153 193.387 130.052 1.00 68.07 O
ATOM 5 O5' A B2741 41.086 193.559 127.568 1.00 67.86 O
ATOM 6 C5' A B2741 39.817 193.800 126.945 1.00 66.60 C
ATOM 7 C4' A B2741 39.941 193.680 125.447 1.00 66.55 C
ATOM 8 O4' A B2741 40.411 192.343 125.116 1.00 66.23 O
ATOM 9 C3' A B2741 38.636 193.873 124.672 1.00 66.73 C
ATOM 10 O3' A B2741 38.928 194.394 123.377 1.00 67.87 O
ATOM 11 C2' A B2741 38.152 192.436 124.503 1.00 66.27 C
ATOM 12 O2' A B2741 37.261 192.272 123.417 1.00 64.96 O
ATOM 13 C1' A B2741 39.482 191.729 124.246 1.00 67.09 C
ATOM 14 N9 A B2741 39.514 190.282 124.454 1.00 66.28 N
ATOM 15 C8 A B2741 40.009 189.358 123.571 1.00 65.58 C
ATOM 16 N7 A B2741 39.918 188.122 123.991 1.00 66.67 N
ATOM 17 C5 A B2741 39.324 188.237 125.239 1.00 66.67 C
ATOM 18 C6 A B2741 38.955 187.281 126.198 1.00 67.00 C
ATOM 19 N6 A B2741 39.137 185.971 126.040 1.00 66.44 N
ATOM 20 N1 A B2741 38.384 187.723 127.339 1.00 67.21 N
ATOM 21 C2 A B2741 38.196 189.040 127.489 1.00 66.78 C
ATOM 22 N3 A B2741 38.499 190.037 126.658 1.00 66.65 N
ATOM 23 C4 A B2741 39.069 189.562 125.538 1.00 66.38 C
ATOM 24 P C B2742 39.241 195.958 123.182 1.00 69.66 P
ATOM 25 OP1 C B2742 39.648 196.527 124.496 1.00 68.56 O
ATOM 26 OP2 C B2742 38.110 196.571 122.427 1.00 67.95 O
ATOM 27 O5' C B2742 40.532 195.954 122.249 1.00 67.41 O
TER
Atoms:
C2: (44.693,193.025,120.919)
OP1: (39.648,196.527,124.496)
OP2: (38.110,196.571,122.427)
C4: (43.792,191.725,122.630)
O5': (40.532,195.954,122.249)
C3': (41.402,195.588,119.494)
C1': (43.599,195.149,120.222)
O4': (43.087,196.223,120.997)
C5': (40.902,197.113,121.484)
P: (39.241,195.958,123.182)
O2: (45.560,193.241,120.053)
C4': (41.867,196.724,120.392)
C2': (42.718,195.028,118.976)
O2': (43.274,195.809,117.940)
N1: (43.630,193.935,121.069)
N3: (44.746,191.932,121.719)
N4: (43.894,190.643,123.408)
C6: (42.650,193.700,121.997)
C5: (42.691,192.619,122.789)
O3': (40.544,196.049,118.457)
OP1: (39.648,196.527,124.496)
OP2: (38.110,196.571,122.427)
C4: (43.792,191.725,122.630)
O5': (40.532,195.954,122.249)
C3': (41.402,195.588,119.494)
C1': (43.599,195.149,120.222)
O4': (43.087,196.223,120.997)
C5': (40.902,197.113,121.484)
P: (39.241,195.958,123.182)
O2: (45.560,193.241,120.053)
C4': (41.867,196.724,120.392)
C2': (42.718,195.028,118.976)
O2': (43.274,195.809,117.940)
N1: (43.630,193.935,121.069)
N3: (44.746,191.932,121.719)
N4: (43.894,190.643,123.408)
C6: (42.650,193.700,121.997)
C5: (42.691,192.619,122.789)
O3': (40.544,196.049,118.457)
OP1: (40.907,195.668,128.889)
OP2: (41.153,193.387,130.052)
C3': (38.636,193.873,124.672)
C1': (39.482,191.729,124.246)
C5': (39.817,193.800,126.945)
O4': (40.411,192.343,125.116)
C8: (40.009,189.358,123.571)
O2': (37.261,192.272,123.417)
C6: (38.955,187.281,126.198)
C5: (39.324,188.237,125.239)
C4: (39.069,189.562,125.538)
P: (41.482,194.300,128.922)
C4': (39.941,193.680,125.447)
C2': (38.152,192.436,124.503)
C2: (38.196,189.040,127.489)
N1: (38.384,187.723,127.339)
N3: (38.499,190.037,126.658)
N6: (39.137,185.971,126.040)
N7: (39.918,188.122,123.991)
N9: (39.514,190.282,124.454)
O5': (41.086,193.559,127.568)
O3': (38.928,194.394,123.377)
OP2: (41.153,193.387,130.052)
C3': (38.636,193.873,124.672)
C1': (39.482,191.729,124.246)
C5': (39.817,193.800,126.945)
O4': (40.411,192.343,125.116)
C8: (40.009,189.358,123.571)
O2': (37.261,192.272,123.417)
C6: (38.955,187.281,126.198)
C5: (39.324,188.237,125.239)
C4: (39.069,189.562,125.538)
P: (41.482,194.300,128.922)
C4': (39.941,193.680,125.447)
C2': (38.152,192.436,124.503)
C2: (38.196,189.040,127.489)
N1: (38.384,187.723,127.339)
N3: (38.499,190.037,126.658)
N6: (39.137,185.971,126.040)
N7: (39.918,188.122,123.991)
N9: (39.514,190.282,124.454)
O5': (41.086,193.559,127.568)
O3': (38.928,194.394,123.377)
Image (generated by PyMOL):