Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01928:01927
Extra
PDB:
ATOM 1 O3' A A1927 96.782 115.745 109.404 1.00 52.89 O
ATOM 2 P C A1928 95.210 116.061 109.315 1.00 54.01 P
ATOM 3 OP1 C A1928 94.905 116.530 107.938 1.00 54.50 O
ATOM 4 OP2 C A1928 94.855 116.915 110.477 1.00 54.61 O
ATOM 5 O5' C A1928 94.550 114.629 109.537 1.00 52.42 O
ATOM 6 C5' C A1928 93.272 114.279 108.967 1.00 50.80 C
ATOM 7 C4' C A1928 92.966 112.827 109.263 1.00 50.30 C
ATOM 8 O4' C A1928 94.009 112.006 108.681 1.00 50.00 O
ATOM 9 C3' C A1928 92.978 112.475 110.743 1.00 49.46 C
ATOM 10 O3' C A1928 91.697 112.683 111.311 1.00 49.24 O
ATOM 11 C2' C A1928 93.370 111.007 110.743 1.00 49.42 C
ATOM 12 O2' C A1928 92.294 110.143 110.455 1.00 51.26 O
ATOM 13 C1' C A1928 94.351 110.957 109.572 1.00 49.40 C
ATOM 14 N1 C A1928 95.775 111.096 109.937 1.00 48.87 N
ATOM 15 C2 C A1928 96.349 110.161 110.802 1.00 49.84 C
ATOM 16 O2 C A1928 95.630 109.268 111.288 1.00 50.36 O
ATOM 17 N3 C A1928 97.672 110.253 111.090 1.00 50.31 N
ATOM 18 C4 C A1928 98.405 111.236 110.557 1.00 49.67 C
ATOM 19 N4 C A1928 99.709 111.277 110.843 1.00 49.89 N
ATOM 20 C5 C A1928 97.837 112.216 109.703 1.00 49.09 C
ATOM 21 C6 C A1928 96.534 112.111 109.423 1.00 49.31 C
ATOM 22 P C A1929 91.553 113.559 112.643 1.00 50.31 P
ATOM 23 OP1 C A1929 90.112 113.612 113.016 1.00 48.64 O
ATOM 24 OP2 C A1929 92.308 114.818 112.441 1.00 51.47 O
ATOM 25 O5' C A1929 92.308 112.697 113.742 1.00 50.80 O
TER
ATOM 1 O3' U B1926 98.654 117.235 103.412 1.00 47.85 O
ATOM 2 P A B1927 97.399 116.484 104.077 1.00 48.66 P
ATOM 3 OP1 A B1927 97.580 115.037 103.805 1.00 49.02 O
ATOM 4 OP2 A B1927 96.144 117.164 103.656 1.00 47.27 O
ATOM 5 O5' A B1927 97.591 116.714 105.635 1.00 48.34 O
ATOM 6 C5' A B1927 98.746 116.207 106.304 1.00 50.65 C
ATOM 7 C4' A B1927 98.346 115.551 107.597 1.00 52.21 C
ATOM 8 O4' A B1927 99.537 115.013 108.232 1.00 52.94 O
ATOM 9 C3' A B1927 97.703 116.484 108.614 1.00 52.20 C
ATOM 10 O3' A B1927 96.782 115.745 109.404 1.00 52.89 O
ATOM 11 C2' A B1927 98.894 116.908 109.462 1.00 52.82 C
ATOM 12 O2' A B1927 98.508 117.304 110.760 1.00 54.99 O
ATOM 13 C1' A B1927 99.723 115.622 109.490 1.00 53.49 C
ATOM 14 N9 A B1927 101.157 115.850 109.666 1.00 55.54 N
ATOM 15 C8 A B1927 102.005 116.552 108.843 1.00 55.87 C
ATOM 16 N7 A B1927 103.239 116.609 109.279 1.00 56.63 N
ATOM 17 C5 A B1927 103.209 115.889 110.463 1.00 57.23 C
ATOM 18 C6 A B1927 104.202 115.582 111.406 1.00 57.73 C
ATOM 19 N6 A B1927 105.468 115.984 111.299 1.00 58.67 N
ATOM 20 N1 A B1927 103.846 114.841 112.478 1.00 58.58 N
ATOM 21 C2 A B1927 102.571 114.442 112.586 1.00 58.62 C
ATOM 22 N3 A B1927 101.544 114.669 111.768 1.00 58.11 N
ATOM 23 C4 A B1927 101.934 115.407 110.712 1.00 57.40 C
ATOM 24 P C B1928 95.210 116.061 109.315 1.00 54.01 P
ATOM 25 OP1 C B1928 94.905 116.530 107.938 1.00 54.50 O
ATOM 26 OP2 C B1928 94.855 116.915 110.477 1.00 54.61 O
ATOM 27 O5' C B1928 94.550 114.629 109.537 1.00 52.42 O
TER
ATOM 2 P C A1928 95.210 116.061 109.315 1.00 54.01 P
ATOM 3 OP1 C A1928 94.905 116.530 107.938 1.00 54.50 O
ATOM 4 OP2 C A1928 94.855 116.915 110.477 1.00 54.61 O
ATOM 5 O5' C A1928 94.550 114.629 109.537 1.00 52.42 O
ATOM 6 C5' C A1928 93.272 114.279 108.967 1.00 50.80 C
ATOM 7 C4' C A1928 92.966 112.827 109.263 1.00 50.30 C
ATOM 8 O4' C A1928 94.009 112.006 108.681 1.00 50.00 O
ATOM 9 C3' C A1928 92.978 112.475 110.743 1.00 49.46 C
ATOM 10 O3' C A1928 91.697 112.683 111.311 1.00 49.24 O
ATOM 11 C2' C A1928 93.370 111.007 110.743 1.00 49.42 C
ATOM 12 O2' C A1928 92.294 110.143 110.455 1.00 51.26 O
ATOM 13 C1' C A1928 94.351 110.957 109.572 1.00 49.40 C
ATOM 14 N1 C A1928 95.775 111.096 109.937 1.00 48.87 N
ATOM 15 C2 C A1928 96.349 110.161 110.802 1.00 49.84 C
ATOM 16 O2 C A1928 95.630 109.268 111.288 1.00 50.36 O
ATOM 17 N3 C A1928 97.672 110.253 111.090 1.00 50.31 N
ATOM 18 C4 C A1928 98.405 111.236 110.557 1.00 49.67 C
ATOM 19 N4 C A1928 99.709 111.277 110.843 1.00 49.89 N
ATOM 20 C5 C A1928 97.837 112.216 109.703 1.00 49.09 C
ATOM 21 C6 C A1928 96.534 112.111 109.423 1.00 49.31 C
ATOM 22 P C A1929 91.553 113.559 112.643 1.00 50.31 P
ATOM 23 OP1 C A1929 90.112 113.612 113.016 1.00 48.64 O
ATOM 24 OP2 C A1929 92.308 114.818 112.441 1.00 51.47 O
ATOM 25 O5' C A1929 92.308 112.697 113.742 1.00 50.80 O
TER
ATOM 1 O3' U B1926 98.654 117.235 103.412 1.00 47.85 O
ATOM 2 P A B1927 97.399 116.484 104.077 1.00 48.66 P
ATOM 3 OP1 A B1927 97.580 115.037 103.805 1.00 49.02 O
ATOM 4 OP2 A B1927 96.144 117.164 103.656 1.00 47.27 O
ATOM 5 O5' A B1927 97.591 116.714 105.635 1.00 48.34 O
ATOM 6 C5' A B1927 98.746 116.207 106.304 1.00 50.65 C
ATOM 7 C4' A B1927 98.346 115.551 107.597 1.00 52.21 C
ATOM 8 O4' A B1927 99.537 115.013 108.232 1.00 52.94 O
ATOM 9 C3' A B1927 97.703 116.484 108.614 1.00 52.20 C
ATOM 10 O3' A B1927 96.782 115.745 109.404 1.00 52.89 O
ATOM 11 C2' A B1927 98.894 116.908 109.462 1.00 52.82 C
ATOM 12 O2' A B1927 98.508 117.304 110.760 1.00 54.99 O
ATOM 13 C1' A B1927 99.723 115.622 109.490 1.00 53.49 C
ATOM 14 N9 A B1927 101.157 115.850 109.666 1.00 55.54 N
ATOM 15 C8 A B1927 102.005 116.552 108.843 1.00 55.87 C
ATOM 16 N7 A B1927 103.239 116.609 109.279 1.00 56.63 N
ATOM 17 C5 A B1927 103.209 115.889 110.463 1.00 57.23 C
ATOM 18 C6 A B1927 104.202 115.582 111.406 1.00 57.73 C
ATOM 19 N6 A B1927 105.468 115.984 111.299 1.00 58.67 N
ATOM 20 N1 A B1927 103.846 114.841 112.478 1.00 58.58 N
ATOM 21 C2 A B1927 102.571 114.442 112.586 1.00 58.62 C
ATOM 22 N3 A B1927 101.544 114.669 111.768 1.00 58.11 N
ATOM 23 C4 A B1927 101.934 115.407 110.712 1.00 57.40 C
ATOM 24 P C B1928 95.210 116.061 109.315 1.00 54.01 P
ATOM 25 OP1 C B1928 94.905 116.530 107.938 1.00 54.50 O
ATOM 26 OP2 C B1928 94.855 116.915 110.477 1.00 54.61 O
ATOM 27 O5' C B1928 94.550 114.629 109.537 1.00 52.42 O
TER
Atoms:
C2: (96.349,110.161,110.802)
OP1: (94.905,116.530,107.938)
OP2: (94.855,116.915,110.477)
C4: (98.405,111.236,110.557)
O5': (94.550,114.629,109.537)
C3': (92.978,112.475,110.743)
C1': (94.351,110.957,109.572)
O4': (94.009,112.006,108.681)
C5': (93.272,114.279,108.967)
P: (95.210,116.061,109.315)
O2: (95.630,109.268,111.288)
C4': (92.966,112.827,109.263)
C2': (93.370,111.007,110.743)
O2': (92.294,110.143,110.455)
N1: (95.775,111.096,109.937)
N3: (97.672,110.253,111.090)
N4: (99.709,111.277,110.843)
C6: (96.534,112.111,109.423)
C5: (97.837,112.216,109.703)
O3': (91.697,112.683,111.311)
OP1: (94.905,116.530,107.938)
OP2: (94.855,116.915,110.477)
C4: (98.405,111.236,110.557)
O5': (94.550,114.629,109.537)
C3': (92.978,112.475,110.743)
C1': (94.351,110.957,109.572)
O4': (94.009,112.006,108.681)
C5': (93.272,114.279,108.967)
P: (95.210,116.061,109.315)
O2: (95.630,109.268,111.288)
C4': (92.966,112.827,109.263)
C2': (93.370,111.007,110.743)
O2': (92.294,110.143,110.455)
N1: (95.775,111.096,109.937)
N3: (97.672,110.253,111.090)
N4: (99.709,111.277,110.843)
C6: (96.534,112.111,109.423)
C5: (97.837,112.216,109.703)
O3': (91.697,112.683,111.311)
OP1: (97.580,115.037,103.805)
OP2: (96.144,117.164,103.656)
C3': (97.703,116.484,108.614)
C1': (99.723,115.622,109.490)
C5': (98.746,116.207,106.304)
O4': (99.537,115.013,108.232)
C8: (102.005,116.552,108.843)
O2': (98.508,117.304,110.760)
C6: (104.202,115.582,111.406)
C5: (103.209,115.889,110.463)
C4: (101.934,115.407,110.712)
P: (97.399,116.484,104.077)
C4': (98.346,115.551,107.597)
C2': (98.894,116.908,109.462)
C2: (102.571,114.442,112.586)
N1: (103.846,114.841,112.478)
N3: (101.544,114.669,111.768)
N6: (105.468,115.984,111.299)
N7: (103.239,116.609,109.279)
N9: (101.157,115.850,109.666)
O5': (97.591,116.714,105.635)
O3': (96.782,115.745,109.404)
OP2: (96.144,117.164,103.656)
C3': (97.703,116.484,108.614)
C1': (99.723,115.622,109.490)
C5': (98.746,116.207,106.304)
O4': (99.537,115.013,108.232)
C8: (102.005,116.552,108.843)
O2': (98.508,117.304,110.760)
C6: (104.202,115.582,111.406)
C5: (103.209,115.889,110.463)
C4: (101.934,115.407,110.712)
P: (97.399,116.484,104.077)
C4': (98.346,115.551,107.597)
C2': (98.894,116.908,109.462)
C2: (102.571,114.442,112.586)
N1: (103.846,114.841,112.478)
N3: (101.544,114.669,111.768)
N6: (105.468,115.984,111.299)
N7: (103.239,116.609,109.279)
N9: (101.157,115.850,109.666)
O5': (97.591,116.714,105.635)
O3': (96.782,115.745,109.404)
Image (generated by PyMOL):