Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:02742:02741
Extra
PDB:
ATOM 1 O3' A A2741 39.128 194.086 123.192 1.00 68.28 O
ATOM 2 P C A2742 39.427 195.650 122.993 1.00 69.44 P
ATOM 3 OP1 C A2742 39.804 196.219 124.314 1.00 68.87 O
ATOM 4 OP2 C A2742 38.304 196.251 122.222 1.00 68.56 O
ATOM 5 O5' C A2742 40.730 195.662 122.079 1.00 67.65 O
ATOM 6 C5' C A2742 41.113 196.841 121.357 1.00 67.67 C
ATOM 7 C4' C A2742 42.091 196.484 120.267 1.00 68.06 C
ATOM 8 O4' C A2742 43.325 196.013 120.866 1.00 69.37 O
ATOM 9 C3' C A2742 41.651 195.344 119.367 1.00 67.36 C
ATOM 10 O3' C A2742 40.786 195.795 118.338 1.00 67.27 O
ATOM 11 C2' C A2742 42.978 194.813 118.847 1.00 67.82 C
ATOM 12 O2' C A2742 43.523 195.620 117.825 1.00 66.70 O
ATOM 13 C1' C A2742 43.852 194.943 120.096 1.00 69.11 C
ATOM 14 N1 C A2742 43.877 193.730 120.942 1.00 69.54 N
ATOM 15 C2 C A2742 44.839 192.740 120.684 1.00 69.80 C
ATOM 16 O2 C A2742 45.620 192.889 119.727 1.00 70.71 O
ATOM 17 N3 C A2742 44.888 191.644 121.479 1.00 69.66 N
ATOM 18 C4 C A2742 44.023 191.510 122.487 1.00 70.12 C
ATOM 19 N4 C A2742 44.117 190.420 123.254 1.00 69.35 N
ATOM 20 C5 C A2742 43.023 192.491 122.758 1.00 70.15 C
ATOM 21 C6 C A2742 42.987 193.572 121.970 1.00 69.21 C
ATOM 22 P U A2743 39.793 194.755 117.628 1.00 68.59 P
ATOM 23 OP1 U A2743 39.015 195.459 116.573 1.00 68.60 O
ATOM 24 OP2 U A2743 39.073 194.018 118.702 1.00 67.17 O
ATOM 25 O5' U A2743 40.795 193.747 116.908 1.00 70.07 O
TER
ATOM 1 O3' C B2740 43.287 194.223 128.695 1.00 64.37 O
ATOM 2 P A B2741 41.694 194.003 128.750 1.00 65.17 P
ATOM 3 OP1 A B2741 41.099 195.359 128.782 1.00 64.36 O
ATOM 4 OP2 A B2741 41.353 193.023 129.820 1.00 64.47 O
ATOM 5 O5' A B2741 41.342 193.335 127.349 1.00 65.93 O
ATOM 6 C5' A B2741 40.060 193.537 126.744 1.00 66.21 C
ATOM 7 C4' A B2741 40.164 193.391 125.248 1.00 66.81 C
ATOM 8 O4' A B2741 40.630 192.051 124.928 1.00 67.09 O
ATOM 9 C3' A B2741 38.849 193.571 124.491 1.00 67.67 C
ATOM 10 O3' A B2741 39.128 194.086 123.192 1.00 68.28 O
ATOM 11 C2' A B2741 38.367 192.133 124.340 1.00 67.71 C
ATOM 12 O2' A B2741 37.451 191.958 123.276 1.00 67.38 O
ATOM 13 C1' A B2741 39.697 191.431 124.067 1.00 68.04 C
ATOM 14 N9 A B2741 39.734 189.986 124.284 1.00 67.07 N
ATOM 15 C8 A B2741 40.292 189.062 123.442 1.00 66.50 C
ATOM 16 N7 A B2741 40.189 187.829 123.868 1.00 67.58 N
ATOM 17 C5 A B2741 39.518 187.948 125.075 1.00 67.52 C
ATOM 18 C6 A B2741 39.098 186.997 126.021 1.00 67.80 C
ATOM 19 N6 A B2741 39.299 185.685 125.888 1.00 67.07 N
ATOM 20 N1 A B2741 38.454 187.445 127.120 1.00 67.55 N
ATOM 21 C2 A B2741 38.246 188.762 127.243 1.00 67.23 C
ATOM 22 N3 A B2741 38.589 189.752 126.421 1.00 66.82 N
ATOM 23 C4 A B2741 39.231 189.272 125.345 1.00 67.14 C
ATOM 24 P C B2742 39.427 195.650 122.993 1.00 69.44 P
ATOM 25 OP1 C B2742 39.804 196.219 124.314 1.00 68.87 O
ATOM 26 OP2 C B2742 38.304 196.251 122.222 1.00 68.56 O
ATOM 27 O5' C B2742 40.730 195.662 122.079 1.00 67.65 O
TER
ATOM 2 P C A2742 39.427 195.650 122.993 1.00 69.44 P
ATOM 3 OP1 C A2742 39.804 196.219 124.314 1.00 68.87 O
ATOM 4 OP2 C A2742 38.304 196.251 122.222 1.00 68.56 O
ATOM 5 O5' C A2742 40.730 195.662 122.079 1.00 67.65 O
ATOM 6 C5' C A2742 41.113 196.841 121.357 1.00 67.67 C
ATOM 7 C4' C A2742 42.091 196.484 120.267 1.00 68.06 C
ATOM 8 O4' C A2742 43.325 196.013 120.866 1.00 69.37 O
ATOM 9 C3' C A2742 41.651 195.344 119.367 1.00 67.36 C
ATOM 10 O3' C A2742 40.786 195.795 118.338 1.00 67.27 O
ATOM 11 C2' C A2742 42.978 194.813 118.847 1.00 67.82 C
ATOM 12 O2' C A2742 43.523 195.620 117.825 1.00 66.70 O
ATOM 13 C1' C A2742 43.852 194.943 120.096 1.00 69.11 C
ATOM 14 N1 C A2742 43.877 193.730 120.942 1.00 69.54 N
ATOM 15 C2 C A2742 44.839 192.740 120.684 1.00 69.80 C
ATOM 16 O2 C A2742 45.620 192.889 119.727 1.00 70.71 O
ATOM 17 N3 C A2742 44.888 191.644 121.479 1.00 69.66 N
ATOM 18 C4 C A2742 44.023 191.510 122.487 1.00 70.12 C
ATOM 19 N4 C A2742 44.117 190.420 123.254 1.00 69.35 N
ATOM 20 C5 C A2742 43.023 192.491 122.758 1.00 70.15 C
ATOM 21 C6 C A2742 42.987 193.572 121.970 1.00 69.21 C
ATOM 22 P U A2743 39.793 194.755 117.628 1.00 68.59 P
ATOM 23 OP1 U A2743 39.015 195.459 116.573 1.00 68.60 O
ATOM 24 OP2 U A2743 39.073 194.018 118.702 1.00 67.17 O
ATOM 25 O5' U A2743 40.795 193.747 116.908 1.00 70.07 O
TER
ATOM 1 O3' C B2740 43.287 194.223 128.695 1.00 64.37 O
ATOM 2 P A B2741 41.694 194.003 128.750 1.00 65.17 P
ATOM 3 OP1 A B2741 41.099 195.359 128.782 1.00 64.36 O
ATOM 4 OP2 A B2741 41.353 193.023 129.820 1.00 64.47 O
ATOM 5 O5' A B2741 41.342 193.335 127.349 1.00 65.93 O
ATOM 6 C5' A B2741 40.060 193.537 126.744 1.00 66.21 C
ATOM 7 C4' A B2741 40.164 193.391 125.248 1.00 66.81 C
ATOM 8 O4' A B2741 40.630 192.051 124.928 1.00 67.09 O
ATOM 9 C3' A B2741 38.849 193.571 124.491 1.00 67.67 C
ATOM 10 O3' A B2741 39.128 194.086 123.192 1.00 68.28 O
ATOM 11 C2' A B2741 38.367 192.133 124.340 1.00 67.71 C
ATOM 12 O2' A B2741 37.451 191.958 123.276 1.00 67.38 O
ATOM 13 C1' A B2741 39.697 191.431 124.067 1.00 68.04 C
ATOM 14 N9 A B2741 39.734 189.986 124.284 1.00 67.07 N
ATOM 15 C8 A B2741 40.292 189.062 123.442 1.00 66.50 C
ATOM 16 N7 A B2741 40.189 187.829 123.868 1.00 67.58 N
ATOM 17 C5 A B2741 39.518 187.948 125.075 1.00 67.52 C
ATOM 18 C6 A B2741 39.098 186.997 126.021 1.00 67.80 C
ATOM 19 N6 A B2741 39.299 185.685 125.888 1.00 67.07 N
ATOM 20 N1 A B2741 38.454 187.445 127.120 1.00 67.55 N
ATOM 21 C2 A B2741 38.246 188.762 127.243 1.00 67.23 C
ATOM 22 N3 A B2741 38.589 189.752 126.421 1.00 66.82 N
ATOM 23 C4 A B2741 39.231 189.272 125.345 1.00 67.14 C
ATOM 24 P C B2742 39.427 195.650 122.993 1.00 69.44 P
ATOM 25 OP1 C B2742 39.804 196.219 124.314 1.00 68.87 O
ATOM 26 OP2 C B2742 38.304 196.251 122.222 1.00 68.56 O
ATOM 27 O5' C B2742 40.730 195.662 122.079 1.00 67.65 O
TER
Atoms:
C2: (44.839,192.740,120.684)
OP1: (39.804,196.219,124.314)
OP2: (38.304,196.251,122.222)
C4: (44.023,191.510,122.487)
O5': (40.730,195.662,122.079)
C3': (41.651,195.344,119.367)
C1': (43.852,194.943,120.096)
O4': (43.325,196.013,120.866)
C5': (41.113,196.841,121.357)
P: (39.427,195.650,122.993)
O2: (45.620,192.889,119.727)
C4': (42.091,196.484,120.267)
C2': (42.978,194.813,118.847)
O2': (43.523,195.620,117.825)
N1: (43.877,193.730,120.942)
N3: (44.888,191.644,121.479)
N4: (44.117,190.420,123.254)
C6: (42.987,193.572,121.970)
C5: (43.023,192.491,122.758)
O3': (40.786,195.795,118.338)
OP1: (39.804,196.219,124.314)
OP2: (38.304,196.251,122.222)
C4: (44.023,191.510,122.487)
O5': (40.730,195.662,122.079)
C3': (41.651,195.344,119.367)
C1': (43.852,194.943,120.096)
O4': (43.325,196.013,120.866)
C5': (41.113,196.841,121.357)
P: (39.427,195.650,122.993)
O2: (45.620,192.889,119.727)
C4': (42.091,196.484,120.267)
C2': (42.978,194.813,118.847)
O2': (43.523,195.620,117.825)
N1: (43.877,193.730,120.942)
N3: (44.888,191.644,121.479)
N4: (44.117,190.420,123.254)
C6: (42.987,193.572,121.970)
C5: (43.023,192.491,122.758)
O3': (40.786,195.795,118.338)
OP1: (41.099,195.359,128.782)
OP2: (41.353,193.023,129.820)
C3': (38.849,193.571,124.491)
C1': (39.697,191.431,124.067)
C5': (40.060,193.537,126.744)
O4': (40.630,192.051,124.928)
C8: (40.292,189.062,123.442)
O2': (37.451,191.958,123.276)
C6: (39.098,186.997,126.021)
C5: (39.518,187.948,125.075)
C4: (39.231,189.272,125.345)
P: (41.694,194.003,128.750)
C4': (40.164,193.391,125.248)
C2': (38.367,192.133,124.340)
C2: (38.246,188.762,127.243)
N1: (38.454,187.445,127.120)
N3: (38.589,189.752,126.421)
N6: (39.299,185.685,125.888)
N7: (40.189,187.829,123.868)
N9: (39.734,189.986,124.284)
O5': (41.342,193.335,127.349)
O3': (39.128,194.086,123.192)
OP2: (41.353,193.023,129.820)
C3': (38.849,193.571,124.491)
C1': (39.697,191.431,124.067)
C5': (40.060,193.537,126.744)
O4': (40.630,192.051,124.928)
C8: (40.292,189.062,123.442)
O2': (37.451,191.958,123.276)
C6: (39.098,186.997,126.021)
C5: (39.518,187.948,125.075)
C4: (39.231,189.272,125.345)
P: (41.694,194.003,128.750)
C4': (40.164,193.391,125.248)
C2': (38.367,192.133,124.340)
C2: (38.246,188.762,127.243)
N1: (38.454,187.445,127.120)
N3: (38.589,189.752,126.421)
N6: (39.299,185.685,125.888)
N7: (40.189,187.829,123.868)
N9: (39.734,189.986,124.284)
O5': (41.342,193.335,127.349)
O3': (39.128,194.086,123.192)
Image (generated by PyMOL):