Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01928:01927
Extra
PDB:
ATOM 1 O3' A A1927 96.758 116.036 109.793 1.00 60.88 O
ATOM 2 P C A1928 95.249 116.530 110.017 1.00 60.57 P
ATOM 3 OP1 C A1928 94.787 117.144 108.746 1.00 59.91 O
ATOM 4 OP2 C A1928 95.221 117.323 111.275 1.00 59.22 O
ATOM 5 O5' C A1928 94.467 115.166 110.289 1.00 60.14 O
ATOM 6 C5' C A1928 93.229 114.838 109.621 1.00 59.30 C
ATOM 7 C4' C A1928 92.897 113.377 109.842 1.00 58.71 C
ATOM 8 O4' C A1928 93.939 112.565 109.245 1.00 60.16 O
ATOM 9 C3' C A1928 92.857 112.936 111.297 1.00 58.09 C
ATOM 10 O3' C A1928 91.569 113.124 111.856 1.00 58.59 O
ATOM 11 C2' C A1928 93.191 111.458 111.208 1.00 59.12 C
ATOM 12 O2' C A1928 92.081 110.689 110.814 1.00 59.62 O
ATOM 13 C1' C A1928 94.212 111.442 110.070 1.00 60.42 C
ATOM 14 N1 C A1928 95.634 111.489 110.485 1.00 61.76 N
ATOM 15 C2 C A1928 96.131 110.515 111.367 1.00 63.07 C
ATOM 16 O2 C A1928 95.359 109.652 111.819 1.00 64.22 O
ATOM 17 N3 C A1928 97.441 110.541 111.705 1.00 63.99 N
ATOM 18 C4 C A1928 98.242 111.484 111.205 1.00 63.66 C
ATOM 19 N4 C A1928 99.532 111.459 111.543 1.00 63.87 N
ATOM 20 C5 C A1928 97.760 112.493 110.332 1.00 62.99 C
ATOM 21 C6 C A1928 96.466 112.459 110.002 1.00 62.49 C
ATOM 22 P C A1929 91.412 113.886 113.255 1.00 59.81 P
ATOM 23 OP1 C A1929 89.983 113.835 113.667 1.00 60.40 O
ATOM 24 OP2 C A1929 92.087 115.196 113.110 1.00 60.65 O
ATOM 25 O5' C A1929 92.244 112.997 114.278 1.00 61.25 O
TER
ATOM 1 O3' U B1926 98.679 117.642 103.804 1.00 59.67 O
ATOM 2 P A B1927 97.472 116.836 104.493 1.00 60.25 P
ATOM 3 OP1 A B1927 97.740 115.398 104.262 1.00 59.22 O
ATOM 4 OP2 A B1927 96.181 117.424 104.063 1.00 61.24 O
ATOM 5 O5' A B1927 97.634 117.127 106.043 1.00 59.81 O
ATOM 6 C5' A B1927 98.755 116.622 106.748 1.00 60.98 C
ATOM 7 C4' A B1927 98.304 115.926 107.996 1.00 61.56 C
ATOM 8 O4' A B1927 99.466 115.332 108.631 1.00 64.22 O
ATOM 9 C3' A B1927 97.667 116.827 109.042 1.00 60.99 C
ATOM 10 O3' A B1927 96.758 116.036 109.793 1.00 60.88 O
ATOM 11 C2' A B1927 98.861 117.203 109.908 1.00 61.77 C
ATOM 12 O2' A B1927 98.487 117.566 111.217 1.00 63.42 O
ATOM 13 C1' A B1927 99.647 115.892 109.913 1.00 63.88 C
ATOM 14 N9 A B1927 101.083 116.052 110.138 1.00 66.18 N
ATOM 15 C8 A B1927 102.008 116.629 109.300 1.00 66.87 C
ATOM 16 N7 A B1927 103.222 116.658 109.792 1.00 67.89 N
ATOM 17 C5 A B1927 103.093 116.048 111.032 1.00 68.53 C
ATOM 18 C6 A B1927 104.019 115.775 112.047 1.00 69.61 C
ATOM 19 N6 A B1927 105.314 116.090 111.968 1.00 70.89 N
ATOM 20 N1 A B1927 103.567 115.159 113.163 1.00 70.42 N
ATOM 21 C2 A B1927 102.268 114.842 113.237 1.00 69.01 C
ATOM 22 N3 A B1927 101.299 115.046 112.348 1.00 68.70 N
ATOM 23 C4 A B1927 101.783 115.662 111.255 1.00 68.00 C
ATOM 24 P C B1928 95.249 116.530 110.017 1.00 60.57 P
ATOM 25 OP1 C B1928 94.787 117.144 108.746 1.00 59.91 O
ATOM 26 OP2 C B1928 95.221 117.323 111.275 1.00 59.22 O
ATOM 27 O5' C B1928 94.467 115.166 110.289 1.00 60.14 O
TER
ATOM 2 P C A1928 95.249 116.530 110.017 1.00 60.57 P
ATOM 3 OP1 C A1928 94.787 117.144 108.746 1.00 59.91 O
ATOM 4 OP2 C A1928 95.221 117.323 111.275 1.00 59.22 O
ATOM 5 O5' C A1928 94.467 115.166 110.289 1.00 60.14 O
ATOM 6 C5' C A1928 93.229 114.838 109.621 1.00 59.30 C
ATOM 7 C4' C A1928 92.897 113.377 109.842 1.00 58.71 C
ATOM 8 O4' C A1928 93.939 112.565 109.245 1.00 60.16 O
ATOM 9 C3' C A1928 92.857 112.936 111.297 1.00 58.09 C
ATOM 10 O3' C A1928 91.569 113.124 111.856 1.00 58.59 O
ATOM 11 C2' C A1928 93.191 111.458 111.208 1.00 59.12 C
ATOM 12 O2' C A1928 92.081 110.689 110.814 1.00 59.62 O
ATOM 13 C1' C A1928 94.212 111.442 110.070 1.00 60.42 C
ATOM 14 N1 C A1928 95.634 111.489 110.485 1.00 61.76 N
ATOM 15 C2 C A1928 96.131 110.515 111.367 1.00 63.07 C
ATOM 16 O2 C A1928 95.359 109.652 111.819 1.00 64.22 O
ATOM 17 N3 C A1928 97.441 110.541 111.705 1.00 63.99 N
ATOM 18 C4 C A1928 98.242 111.484 111.205 1.00 63.66 C
ATOM 19 N4 C A1928 99.532 111.459 111.543 1.00 63.87 N
ATOM 20 C5 C A1928 97.760 112.493 110.332 1.00 62.99 C
ATOM 21 C6 C A1928 96.466 112.459 110.002 1.00 62.49 C
ATOM 22 P C A1929 91.412 113.886 113.255 1.00 59.81 P
ATOM 23 OP1 C A1929 89.983 113.835 113.667 1.00 60.40 O
ATOM 24 OP2 C A1929 92.087 115.196 113.110 1.00 60.65 O
ATOM 25 O5' C A1929 92.244 112.997 114.278 1.00 61.25 O
TER
ATOM 1 O3' U B1926 98.679 117.642 103.804 1.00 59.67 O
ATOM 2 P A B1927 97.472 116.836 104.493 1.00 60.25 P
ATOM 3 OP1 A B1927 97.740 115.398 104.262 1.00 59.22 O
ATOM 4 OP2 A B1927 96.181 117.424 104.063 1.00 61.24 O
ATOM 5 O5' A B1927 97.634 117.127 106.043 1.00 59.81 O
ATOM 6 C5' A B1927 98.755 116.622 106.748 1.00 60.98 C
ATOM 7 C4' A B1927 98.304 115.926 107.996 1.00 61.56 C
ATOM 8 O4' A B1927 99.466 115.332 108.631 1.00 64.22 O
ATOM 9 C3' A B1927 97.667 116.827 109.042 1.00 60.99 C
ATOM 10 O3' A B1927 96.758 116.036 109.793 1.00 60.88 O
ATOM 11 C2' A B1927 98.861 117.203 109.908 1.00 61.77 C
ATOM 12 O2' A B1927 98.487 117.566 111.217 1.00 63.42 O
ATOM 13 C1' A B1927 99.647 115.892 109.913 1.00 63.88 C
ATOM 14 N9 A B1927 101.083 116.052 110.138 1.00 66.18 N
ATOM 15 C8 A B1927 102.008 116.629 109.300 1.00 66.87 C
ATOM 16 N7 A B1927 103.222 116.658 109.792 1.00 67.89 N
ATOM 17 C5 A B1927 103.093 116.048 111.032 1.00 68.53 C
ATOM 18 C6 A B1927 104.019 115.775 112.047 1.00 69.61 C
ATOM 19 N6 A B1927 105.314 116.090 111.968 1.00 70.89 N
ATOM 20 N1 A B1927 103.567 115.159 113.163 1.00 70.42 N
ATOM 21 C2 A B1927 102.268 114.842 113.237 1.00 69.01 C
ATOM 22 N3 A B1927 101.299 115.046 112.348 1.00 68.70 N
ATOM 23 C4 A B1927 101.783 115.662 111.255 1.00 68.00 C
ATOM 24 P C B1928 95.249 116.530 110.017 1.00 60.57 P
ATOM 25 OP1 C B1928 94.787 117.144 108.746 1.00 59.91 O
ATOM 26 OP2 C B1928 95.221 117.323 111.275 1.00 59.22 O
ATOM 27 O5' C B1928 94.467 115.166 110.289 1.00 60.14 O
TER
Atoms:
C2: (96.131,110.515,111.367)
OP1: (94.787,117.144,108.746)
OP2: (95.221,117.323,111.275)
C4: (98.242,111.484,111.205)
O5': (94.467,115.166,110.289)
C3': (92.857,112.936,111.297)
C1': (94.212,111.442,110.070)
O4': (93.939,112.565,109.245)
C5': (93.229,114.838,109.621)
P: (95.249,116.530,110.017)
O2: (95.359,109.652,111.819)
C4': (92.897,113.377,109.842)
C2': (93.191,111.458,111.208)
O2': (92.081,110.689,110.814)
N1: (95.634,111.489,110.485)
N3: (97.441,110.541,111.705)
N4: (99.532,111.459,111.543)
C6: (96.466,112.459,110.002)
C5: (97.760,112.493,110.332)
O3': (91.569,113.124,111.856)
OP1: (94.787,117.144,108.746)
OP2: (95.221,117.323,111.275)
C4: (98.242,111.484,111.205)
O5': (94.467,115.166,110.289)
C3': (92.857,112.936,111.297)
C1': (94.212,111.442,110.070)
O4': (93.939,112.565,109.245)
C5': (93.229,114.838,109.621)
P: (95.249,116.530,110.017)
O2: (95.359,109.652,111.819)
C4': (92.897,113.377,109.842)
C2': (93.191,111.458,111.208)
O2': (92.081,110.689,110.814)
N1: (95.634,111.489,110.485)
N3: (97.441,110.541,111.705)
N4: (99.532,111.459,111.543)
C6: (96.466,112.459,110.002)
C5: (97.760,112.493,110.332)
O3': (91.569,113.124,111.856)
OP1: (97.740,115.398,104.262)
OP2: (96.181,117.424,104.063)
C3': (97.667,116.827,109.042)
C1': (99.647,115.892,109.913)
C5': (98.755,116.622,106.748)
O4': (99.466,115.332,108.631)
C8: (102.008,116.629,109.300)
O2': (98.487,117.566,111.217)
C6: (104.019,115.775,112.047)
C5: (103.093,116.048,111.032)
C4: (101.783,115.662,111.255)
P: (97.472,116.836,104.493)
C4': (98.304,115.926,107.996)
C2': (98.861,117.203,109.908)
C2: (102.268,114.842,113.237)
N1: (103.567,115.159,113.163)
N3: (101.299,115.046,112.348)
N6: (105.314,116.090,111.968)
N7: (103.222,116.658,109.792)
N9: (101.083,116.052,110.138)
O5': (97.634,117.127,106.043)
O3': (96.758,116.036,109.793)
OP2: (96.181,117.424,104.063)
C3': (97.667,116.827,109.042)
C1': (99.647,115.892,109.913)
C5': (98.755,116.622,106.748)
O4': (99.466,115.332,108.631)
C8: (102.008,116.629,109.300)
O2': (98.487,117.566,111.217)
C6: (104.019,115.775,112.047)
C5: (103.093,116.048,111.032)
C4: (101.783,115.662,111.255)
P: (97.472,116.836,104.493)
C4': (98.304,115.926,107.996)
C2': (98.861,117.203,109.908)
C2: (102.268,114.842,113.237)
N1: (103.567,115.159,113.163)
N3: (101.299,115.046,112.348)
N6: (105.314,116.090,111.968)
N7: (103.222,116.658,109.792)
N9: (101.083,116.052,110.138)
O5': (97.634,117.127,106.043)
O3': (96.758,116.036,109.793)
Image (generated by PyMOL):