Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02374:02373
Extra
PDB:
ATOM 1 O3' A A2373 58.703 104.109 99.864 1.00 35.45 O
ATOM 2 P C A2374 57.606 103.921 98.718 1.00 34.34 P
ATOM 3 OP1 C A2374 57.423 102.474 98.467 1.00 35.24 O
ATOM 4 OP2 C A2374 58.011 104.813 97.618 1.00 36.46 O
ATOM 5 O5' C A2374 56.245 104.516 99.288 1.00 35.81 O
ATOM 6 C5' C A2374 55.679 104.089 100.543 1.00 33.57 C
ATOM 7 C4' C A2374 54.611 105.073 100.986 1.00 33.68 C
ATOM 8 O4' C A2374 54.637 105.156 102.437 1.00 33.78 O
ATOM 9 C3' C A2374 54.842 106.501 100.506 1.00 34.32 C
ATOM 10 O3' C A2374 54.206 106.788 99.274 1.00 35.01 O
ATOM 11 C2' C A2374 54.366 107.355 101.663 1.00 35.77 C
ATOM 12 O2' C A2374 52.971 107.541 101.702 1.00 39.06 O
ATOM 13 C1' C A2374 54.820 106.503 102.843 1.00 35.69 C
ATOM 14 N1 C A2374 56.249 106.724 103.189 1.00 36.20 N
ATOM 15 C2 C A2374 56.619 107.956 103.778 1.00 38.38 C
ATOM 16 O2 C A2374 55.741 108.824 103.979 1.00 40.34 O
ATOM 17 N3 C A2374 57.915 108.170 104.105 1.00 36.77 N
ATOM 18 C4 C A2374 58.826 107.231 103.859 1.00 36.06 C
ATOM 19 N4 C A2374 60.091 107.497 104.187 1.00 36.41 N
ATOM 20 C5 C A2374 58.484 105.980 103.263 1.00 34.40 C
ATOM 21 C6 C A2374 57.200 105.771 102.949 1.00 33.61 C
ATOM 22 P C A2375 54.836 107.900 98.311 1.00 38.38 P
ATOM 23 OP1 C A2375 54.041 107.972 97.071 1.00 37.45 O
ATOM 24 OP2 C A2375 56.291 107.657 98.227 1.00 40.80 O
ATOM 25 O5' C A2375 54.616 109.246 99.119 1.00 38.14 O
TER
ATOM 1 O3' U B2372 62.485 99.904 103.091 1.00 41.27 O
ATOM 2 P A B2373 62.783 100.137 101.531 1.00 42.07 P
ATOM 3 OP1 A B2373 62.370 98.896 100.826 1.00 44.56 O
ATOM 4 OP2 A B2373 64.152 100.663 101.344 1.00 42.38 O
ATOM 5 O5' A B2373 61.779 101.289 101.106 1.00 41.91 O
ATOM 6 C5' A B2373 60.404 101.257 101.495 1.00 40.54 C
ATOM 7 C4' A B2373 59.827 102.637 101.374 1.00 39.37 C
ATOM 8 O4' A B2373 60.683 103.544 102.121 1.00 39.05 O
ATOM 9 C3' A B2373 59.792 103.188 99.956 1.00 37.26 C
ATOM 10 O3' A B2373 58.703 104.109 99.864 1.00 35.45 O
ATOM 11 C2' A B2373 61.153 103.862 99.834 1.00 37.28 C
ATOM 12 O2' A B2373 61.209 104.853 98.828 1.00 37.16 O
ATOM 13 C1' A B2373 61.325 104.442 101.240 1.00 39.02 C
ATOM 14 N9 A B2373 62.713 104.585 101.689 1.00 40.88 N
ATOM 15 C8 A B2373 63.747 103.698 101.525 1.00 41.72 C
ATOM 16 N7 A B2373 64.884 104.113 102.024 1.00 42.69 N
ATOM 17 C5 A B2373 64.582 105.359 102.556 1.00 42.83 C
ATOM 18 C6 A B2373 65.369 106.328 103.216 1.00 43.21 C
ATOM 19 N6 A B2373 66.676 106.194 103.449 1.00 43.79 N
ATOM 20 N1 A B2373 64.759 107.456 103.626 1.00 42.52 N
ATOM 21 C2 A B2373 63.455 107.603 103.376 1.00 44.41 C
ATOM 22 N3 A B2373 62.612 106.775 102.756 1.00 44.54 N
ATOM 23 C4 A B2373 63.246 105.657 102.365 1.00 42.38 C
ATOM 24 P C B2374 57.606 103.921 98.718 1.00 34.34 P
ATOM 25 OP1 C B2374 57.423 102.474 98.467 1.00 35.24 O
ATOM 26 OP2 C B2374 58.011 104.813 97.618 1.00 36.46 O
ATOM 27 O5' C B2374 56.245 104.516 99.288 1.00 35.81 O
TER
ATOM 2 P C A2374 57.606 103.921 98.718 1.00 34.34 P
ATOM 3 OP1 C A2374 57.423 102.474 98.467 1.00 35.24 O
ATOM 4 OP2 C A2374 58.011 104.813 97.618 1.00 36.46 O
ATOM 5 O5' C A2374 56.245 104.516 99.288 1.00 35.81 O
ATOM 6 C5' C A2374 55.679 104.089 100.543 1.00 33.57 C
ATOM 7 C4' C A2374 54.611 105.073 100.986 1.00 33.68 C
ATOM 8 O4' C A2374 54.637 105.156 102.437 1.00 33.78 O
ATOM 9 C3' C A2374 54.842 106.501 100.506 1.00 34.32 C
ATOM 10 O3' C A2374 54.206 106.788 99.274 1.00 35.01 O
ATOM 11 C2' C A2374 54.366 107.355 101.663 1.00 35.77 C
ATOM 12 O2' C A2374 52.971 107.541 101.702 1.00 39.06 O
ATOM 13 C1' C A2374 54.820 106.503 102.843 1.00 35.69 C
ATOM 14 N1 C A2374 56.249 106.724 103.189 1.00 36.20 N
ATOM 15 C2 C A2374 56.619 107.956 103.778 1.00 38.38 C
ATOM 16 O2 C A2374 55.741 108.824 103.979 1.00 40.34 O
ATOM 17 N3 C A2374 57.915 108.170 104.105 1.00 36.77 N
ATOM 18 C4 C A2374 58.826 107.231 103.859 1.00 36.06 C
ATOM 19 N4 C A2374 60.091 107.497 104.187 1.00 36.41 N
ATOM 20 C5 C A2374 58.484 105.980 103.263 1.00 34.40 C
ATOM 21 C6 C A2374 57.200 105.771 102.949 1.00 33.61 C
ATOM 22 P C A2375 54.836 107.900 98.311 1.00 38.38 P
ATOM 23 OP1 C A2375 54.041 107.972 97.071 1.00 37.45 O
ATOM 24 OP2 C A2375 56.291 107.657 98.227 1.00 40.80 O
ATOM 25 O5' C A2375 54.616 109.246 99.119 1.00 38.14 O
TER
ATOM 1 O3' U B2372 62.485 99.904 103.091 1.00 41.27 O
ATOM 2 P A B2373 62.783 100.137 101.531 1.00 42.07 P
ATOM 3 OP1 A B2373 62.370 98.896 100.826 1.00 44.56 O
ATOM 4 OP2 A B2373 64.152 100.663 101.344 1.00 42.38 O
ATOM 5 O5' A B2373 61.779 101.289 101.106 1.00 41.91 O
ATOM 6 C5' A B2373 60.404 101.257 101.495 1.00 40.54 C
ATOM 7 C4' A B2373 59.827 102.637 101.374 1.00 39.37 C
ATOM 8 O4' A B2373 60.683 103.544 102.121 1.00 39.05 O
ATOM 9 C3' A B2373 59.792 103.188 99.956 1.00 37.26 C
ATOM 10 O3' A B2373 58.703 104.109 99.864 1.00 35.45 O
ATOM 11 C2' A B2373 61.153 103.862 99.834 1.00 37.28 C
ATOM 12 O2' A B2373 61.209 104.853 98.828 1.00 37.16 O
ATOM 13 C1' A B2373 61.325 104.442 101.240 1.00 39.02 C
ATOM 14 N9 A B2373 62.713 104.585 101.689 1.00 40.88 N
ATOM 15 C8 A B2373 63.747 103.698 101.525 1.00 41.72 C
ATOM 16 N7 A B2373 64.884 104.113 102.024 1.00 42.69 N
ATOM 17 C5 A B2373 64.582 105.359 102.556 1.00 42.83 C
ATOM 18 C6 A B2373 65.369 106.328 103.216 1.00 43.21 C
ATOM 19 N6 A B2373 66.676 106.194 103.449 1.00 43.79 N
ATOM 20 N1 A B2373 64.759 107.456 103.626 1.00 42.52 N
ATOM 21 C2 A B2373 63.455 107.603 103.376 1.00 44.41 C
ATOM 22 N3 A B2373 62.612 106.775 102.756 1.00 44.54 N
ATOM 23 C4 A B2373 63.246 105.657 102.365 1.00 42.38 C
ATOM 24 P C B2374 57.606 103.921 98.718 1.00 34.34 P
ATOM 25 OP1 C B2374 57.423 102.474 98.467 1.00 35.24 O
ATOM 26 OP2 C B2374 58.011 104.813 97.618 1.00 36.46 O
ATOM 27 O5' C B2374 56.245 104.516 99.288 1.00 35.81 O
TER
Atoms:
C2: (56.619,107.956,103.778)
OP1: (57.423,102.474,98.467)
OP2: (58.011,104.813,97.618)
C4: (58.826,107.231,103.859)
O5': (56.245,104.516,99.288)
C3': (54.842,106.501,100.506)
C1': (54.820,106.503,102.843)
O4': (54.637,105.156,102.437)
C5': (55.679,104.089,100.543)
P: (57.606,103.921,98.718)
O2: (55.741,108.824,103.979)
C4': (54.611,105.073,100.986)
C2': (54.366,107.355,101.663)
O2': (52.971,107.541,101.702)
N1: (56.249,106.724,103.189)
N3: (57.915,108.170,104.105)
N4: (60.091,107.497,104.187)
C6: (57.200,105.771,102.949)
C5: (58.484,105.980,103.263)
O3': (54.206,106.788,99.274)
OP1: (57.423,102.474,98.467)
OP2: (58.011,104.813,97.618)
C4: (58.826,107.231,103.859)
O5': (56.245,104.516,99.288)
C3': (54.842,106.501,100.506)
C1': (54.820,106.503,102.843)
O4': (54.637,105.156,102.437)
C5': (55.679,104.089,100.543)
P: (57.606,103.921,98.718)
O2: (55.741,108.824,103.979)
C4': (54.611,105.073,100.986)
C2': (54.366,107.355,101.663)
O2': (52.971,107.541,101.702)
N1: (56.249,106.724,103.189)
N3: (57.915,108.170,104.105)
N4: (60.091,107.497,104.187)
C6: (57.200,105.771,102.949)
C5: (58.484,105.980,103.263)
O3': (54.206,106.788,99.274)
OP1: (62.370,98.896,100.826)
OP2: (64.152,100.663,101.344)
C3': (59.792,103.188,99.956)
C1': (61.325,104.442,101.240)
C5': (60.404,101.257,101.495)
O4': (60.683,103.544,102.121)
C8: (63.747,103.698,101.525)
O2': (61.209,104.853,98.828)
C6: (65.369,106.328,103.216)
C5: (64.582,105.359,102.556)
C4: (63.246,105.657,102.365)
P: (62.783,100.137,101.531)
C4': (59.827,102.637,101.374)
C2': (61.153,103.862,99.834)
C2: (63.455,107.603,103.376)
N1: (64.759,107.456,103.626)
N3: (62.612,106.775,102.756)
N6: (66.676,106.194,103.449)
N7: (64.884,104.113,102.024)
N9: (62.713,104.585,101.689)
O5': (61.779,101.289,101.106)
O3': (58.703,104.109,99.864)
OP2: (64.152,100.663,101.344)
C3': (59.792,103.188,99.956)
C1': (61.325,104.442,101.240)
C5': (60.404,101.257,101.495)
O4': (60.683,103.544,102.121)
C8: (63.747,103.698,101.525)
O2': (61.209,104.853,98.828)
C6: (65.369,106.328,103.216)
C5: (64.582,105.359,102.556)
C4: (63.246,105.657,102.365)
P: (62.783,100.137,101.531)
C4': (59.827,102.637,101.374)
C2': (61.153,103.862,99.834)
C2: (63.455,107.603,103.376)
N1: (64.759,107.456,103.626)
N3: (62.612,106.775,102.756)
N6: (66.676,106.194,103.449)
N7: (64.884,104.113,102.024)
N9: (62.713,104.585,101.689)
O5': (61.779,101.289,101.106)
O3': (58.703,104.109,99.864)
Image (generated by PyMOL):