Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01928:01927
Extra
PDB:
ATOM 1 O3' A A1927 96.647 115.907 109.527 1.00 58.27 O
ATOM 2 P C A1928 95.073 116.226 109.504 1.00 58.01 P
ATOM 3 OP1 C A1928 94.696 116.744 108.166 1.00 58.05 O
ATOM 4 OP2 C A1928 94.761 117.026 110.715 1.00 57.46 O
ATOM 5 O5' C A1928 94.448 114.776 109.709 1.00 58.62 O
ATOM 6 C5' C A1928 93.230 114.358 109.068 1.00 58.39 C
ATOM 7 C4' C A1928 92.978 112.899 109.376 1.00 58.28 C
ATOM 8 O4' C A1928 94.068 112.117 108.828 1.00 58.44 O
ATOM 9 C3' C A1928 92.983 112.565 110.862 1.00 57.64 C
ATOM 10 O3' C A1928 91.695 112.747 111.433 1.00 57.55 O
ATOM 11 C2' C A1928 93.415 111.109 110.887 1.00 56.93 C
ATOM 12 O2' C A1928 92.362 110.215 110.621 1.00 57.84 O
ATOM 13 C1' C A1928 94.403 111.067 109.722 1.00 57.93 C
ATOM 14 N1 C A1928 95.821 111.205 110.106 1.00 58.41 N
ATOM 15 C2 C A1928 96.392 110.249 110.957 1.00 60.15 C
ATOM 16 O2 C A1928 95.678 109.330 111.400 1.00 62.05 O
ATOM 17 N3 C A1928 97.703 110.351 111.275 1.00 60.27 N
ATOM 18 C4 C A1928 98.433 111.355 110.782 1.00 59.29 C
ATOM 19 N4 C A1928 99.726 111.404 111.101 1.00 60.81 N
ATOM 20 C5 C A1928 97.872 112.348 109.936 1.00 58.08 C
ATOM 21 C6 C A1928 96.578 112.239 109.628 1.00 57.94 C
ATOM 22 P C A1929 91.521 113.694 112.717 1.00 58.54 P
ATOM 23 OP1 C A1929 90.066 113.761 113.013 1.00 58.13 O
ATOM 24 OP2 C A1929 92.285 114.952 112.479 1.00 58.41 O
ATOM 25 O5' C A1929 92.219 112.878 113.893 1.00 58.58 O
TER
ATOM 1 O3' U B1926 98.439 117.437 103.492 1.00 55.79 O
ATOM 2 P A B1927 97.219 116.640 104.172 1.00 56.43 P
ATOM 3 OP1 A B1927 97.426 115.201 103.859 1.00 56.47 O
ATOM 4 OP2 A B1927 95.937 117.294 103.811 1.00 56.00 O
ATOM 5 O5' A B1927 97.445 116.832 105.730 1.00 55.91 O
ATOM 6 C5' A B1927 98.570 116.242 106.375 1.00 57.69 C
ATOM 7 C4' A B1927 98.153 115.635 107.685 1.00 58.72 C
ATOM 8 O4' A B1927 99.337 115.100 108.331 1.00 60.12 O
ATOM 9 C3' A B1927 97.536 116.615 108.677 1.00 58.89 C
ATOM 10 O3' A B1927 96.647 115.907 109.527 1.00 58.27 O
ATOM 11 C2' A B1927 98.745 117.061 109.483 1.00 59.64 C
ATOM 12 O2' A B1927 98.390 117.517 110.770 1.00 60.92 O
ATOM 13 C1' A B1927 99.550 115.763 109.558 1.00 60.75 C
ATOM 14 N9 A B1927 100.987 115.979 109.711 1.00 62.60 N
ATOM 15 C8 A B1927 101.843 116.606 108.840 1.00 63.04 C
ATOM 16 N7 A B1927 103.075 116.689 109.277 1.00 64.09 N
ATOM 17 C5 A B1927 103.033 116.064 110.513 1.00 64.79 C
ATOM 18 C6 A B1927 104.017 115.835 111.488 1.00 65.05 C
ATOM 19 N6 A B1927 105.279 116.245 111.373 1.00 64.97 N
ATOM 20 N1 A B1927 103.652 115.170 112.604 1.00 66.44 N
ATOM 21 C2 A B1927 102.374 114.779 112.731 1.00 66.97 C
ATOM 22 N3 A B1927 101.353 114.950 111.891 1.00 66.31 N
ATOM 23 C4 A B1927 101.755 115.606 110.787 1.00 64.98 C
ATOM 24 P C B1928 95.073 116.226 109.504 1.00 58.01 P
ATOM 25 OP1 C B1928 94.696 116.744 108.166 1.00 58.05 O
ATOM 26 OP2 C B1928 94.761 117.026 110.715 1.00 57.46 O
ATOM 27 O5' C B1928 94.448 114.776 109.709 1.00 58.62 O
TER
ATOM 2 P C A1928 95.073 116.226 109.504 1.00 58.01 P
ATOM 3 OP1 C A1928 94.696 116.744 108.166 1.00 58.05 O
ATOM 4 OP2 C A1928 94.761 117.026 110.715 1.00 57.46 O
ATOM 5 O5' C A1928 94.448 114.776 109.709 1.00 58.62 O
ATOM 6 C5' C A1928 93.230 114.358 109.068 1.00 58.39 C
ATOM 7 C4' C A1928 92.978 112.899 109.376 1.00 58.28 C
ATOM 8 O4' C A1928 94.068 112.117 108.828 1.00 58.44 O
ATOM 9 C3' C A1928 92.983 112.565 110.862 1.00 57.64 C
ATOM 10 O3' C A1928 91.695 112.747 111.433 1.00 57.55 O
ATOM 11 C2' C A1928 93.415 111.109 110.887 1.00 56.93 C
ATOM 12 O2' C A1928 92.362 110.215 110.621 1.00 57.84 O
ATOM 13 C1' C A1928 94.403 111.067 109.722 1.00 57.93 C
ATOM 14 N1 C A1928 95.821 111.205 110.106 1.00 58.41 N
ATOM 15 C2 C A1928 96.392 110.249 110.957 1.00 60.15 C
ATOM 16 O2 C A1928 95.678 109.330 111.400 1.00 62.05 O
ATOM 17 N3 C A1928 97.703 110.351 111.275 1.00 60.27 N
ATOM 18 C4 C A1928 98.433 111.355 110.782 1.00 59.29 C
ATOM 19 N4 C A1928 99.726 111.404 111.101 1.00 60.81 N
ATOM 20 C5 C A1928 97.872 112.348 109.936 1.00 58.08 C
ATOM 21 C6 C A1928 96.578 112.239 109.628 1.00 57.94 C
ATOM 22 P C A1929 91.521 113.694 112.717 1.00 58.54 P
ATOM 23 OP1 C A1929 90.066 113.761 113.013 1.00 58.13 O
ATOM 24 OP2 C A1929 92.285 114.952 112.479 1.00 58.41 O
ATOM 25 O5' C A1929 92.219 112.878 113.893 1.00 58.58 O
TER
ATOM 1 O3' U B1926 98.439 117.437 103.492 1.00 55.79 O
ATOM 2 P A B1927 97.219 116.640 104.172 1.00 56.43 P
ATOM 3 OP1 A B1927 97.426 115.201 103.859 1.00 56.47 O
ATOM 4 OP2 A B1927 95.937 117.294 103.811 1.00 56.00 O
ATOM 5 O5' A B1927 97.445 116.832 105.730 1.00 55.91 O
ATOM 6 C5' A B1927 98.570 116.242 106.375 1.00 57.69 C
ATOM 7 C4' A B1927 98.153 115.635 107.685 1.00 58.72 C
ATOM 8 O4' A B1927 99.337 115.100 108.331 1.00 60.12 O
ATOM 9 C3' A B1927 97.536 116.615 108.677 1.00 58.89 C
ATOM 10 O3' A B1927 96.647 115.907 109.527 1.00 58.27 O
ATOM 11 C2' A B1927 98.745 117.061 109.483 1.00 59.64 C
ATOM 12 O2' A B1927 98.390 117.517 110.770 1.00 60.92 O
ATOM 13 C1' A B1927 99.550 115.763 109.558 1.00 60.75 C
ATOM 14 N9 A B1927 100.987 115.979 109.711 1.00 62.60 N
ATOM 15 C8 A B1927 101.843 116.606 108.840 1.00 63.04 C
ATOM 16 N7 A B1927 103.075 116.689 109.277 1.00 64.09 N
ATOM 17 C5 A B1927 103.033 116.064 110.513 1.00 64.79 C
ATOM 18 C6 A B1927 104.017 115.835 111.488 1.00 65.05 C
ATOM 19 N6 A B1927 105.279 116.245 111.373 1.00 64.97 N
ATOM 20 N1 A B1927 103.652 115.170 112.604 1.00 66.44 N
ATOM 21 C2 A B1927 102.374 114.779 112.731 1.00 66.97 C
ATOM 22 N3 A B1927 101.353 114.950 111.891 1.00 66.31 N
ATOM 23 C4 A B1927 101.755 115.606 110.787 1.00 64.98 C
ATOM 24 P C B1928 95.073 116.226 109.504 1.00 58.01 P
ATOM 25 OP1 C B1928 94.696 116.744 108.166 1.00 58.05 O
ATOM 26 OP2 C B1928 94.761 117.026 110.715 1.00 57.46 O
ATOM 27 O5' C B1928 94.448 114.776 109.709 1.00 58.62 O
TER
Atoms:
C2: (96.392,110.249,110.957)
OP1: (94.696,116.744,108.166)
OP2: (94.761,117.026,110.715)
C4: (98.433,111.355,110.782)
O5': (94.448,114.776,109.709)
C3': (92.983,112.565,110.862)
C1': (94.403,111.067,109.722)
O4': (94.068,112.117,108.828)
C5': (93.230,114.358,109.068)
P: (95.073,116.226,109.504)
O2: (95.678,109.330,111.400)
C4': (92.978,112.899,109.376)
C2': (93.415,111.109,110.887)
O2': (92.362,110.215,110.621)
N1: (95.821,111.205,110.106)
N3: (97.703,110.351,111.275)
N4: (99.726,111.404,111.101)
C6: (96.578,112.239,109.628)
C5: (97.872,112.348,109.936)
O3': (91.695,112.747,111.433)
OP1: (94.696,116.744,108.166)
OP2: (94.761,117.026,110.715)
C4: (98.433,111.355,110.782)
O5': (94.448,114.776,109.709)
C3': (92.983,112.565,110.862)
C1': (94.403,111.067,109.722)
O4': (94.068,112.117,108.828)
C5': (93.230,114.358,109.068)
P: (95.073,116.226,109.504)
O2: (95.678,109.330,111.400)
C4': (92.978,112.899,109.376)
C2': (93.415,111.109,110.887)
O2': (92.362,110.215,110.621)
N1: (95.821,111.205,110.106)
N3: (97.703,110.351,111.275)
N4: (99.726,111.404,111.101)
C6: (96.578,112.239,109.628)
C5: (97.872,112.348,109.936)
O3': (91.695,112.747,111.433)
OP1: (97.426,115.201,103.859)
OP2: (95.937,117.294,103.811)
C3': (97.536,116.615,108.677)
C1': (99.550,115.763,109.558)
C5': (98.570,116.242,106.375)
O4': (99.337,115.100,108.331)
C8: (101.843,116.606,108.840)
O2': (98.390,117.517,110.770)
C6: (104.017,115.835,111.488)
C5: (103.033,116.064,110.513)
C4: (101.755,115.606,110.787)
P: (97.219,116.640,104.172)
C4': (98.153,115.635,107.685)
C2': (98.745,117.061,109.483)
C2: (102.374,114.779,112.731)
N1: (103.652,115.170,112.604)
N3: (101.353,114.950,111.891)
N6: (105.279,116.245,111.373)
N7: (103.075,116.689,109.277)
N9: (100.987,115.979,109.711)
O5': (97.445,116.832,105.730)
O3': (96.647,115.907,109.527)
OP2: (95.937,117.294,103.811)
C3': (97.536,116.615,108.677)
C1': (99.550,115.763,109.558)
C5': (98.570,116.242,106.375)
O4': (99.337,115.100,108.331)
C8: (101.843,116.606,108.840)
O2': (98.390,117.517,110.770)
C6: (104.017,115.835,111.488)
C5: (103.033,116.064,110.513)
C4: (101.755,115.606,110.787)
P: (97.219,116.640,104.172)
C4': (98.153,115.635,107.685)
C2': (98.745,117.061,109.483)
C2: (102.374,114.779,112.731)
N1: (103.652,115.170,112.604)
N3: (101.353,114.950,111.891)
N6: (105.279,116.245,111.373)
N7: (103.075,116.689,109.277)
N9: (100.987,115.979,109.711)
O5': (97.445,116.832,105.730)
O3': (96.647,115.907,109.527)
Image (generated by PyMOL):