Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02742:02741
Extra
PDB:
ATOM 1 O3' A A2741 38.902 194.280 123.238 1.00 74.82 O
ATOM 2 P C A2742 39.168 195.852 123.058 1.00 75.38 P
ATOM 3 OP1 C A2742 39.506 196.404 124.391 1.00 75.90 O
ATOM 4 OP2 C A2742 38.034 196.430 122.287 1.00 74.80 O
ATOM 5 O5' C A2742 40.489 195.901 122.169 1.00 73.99 O
ATOM 6 C5' C A2742 40.863 197.093 121.460 1.00 74.46 C
ATOM 7 C4' C A2742 41.862 196.765 120.374 1.00 75.10 C
ATOM 8 O4' C A2742 43.089 196.288 120.982 1.00 75.90 O
ATOM 9 C3' C A2742 41.465 195.648 119.419 1.00 74.82 C
ATOM 10 O3' C A2742 40.618 196.105 118.374 1.00 75.66 O
ATOM 11 C2' C A2742 42.815 195.176 118.903 1.00 74.94 C
ATOM 12 O2' C A2742 43.359 196.052 117.935 1.00 72.78 O
ATOM 13 C1' C A2742 43.653 195.259 120.179 1.00 76.29 C
ATOM 14 N1 C A2742 43.677 194.008 120.974 1.00 76.82 N
ATOM 15 C2 C A2742 44.745 193.109 120.802 1.00 76.30 C
ATOM 16 O2 C A2742 45.615 193.355 119.946 1.00 76.35 O
ATOM 17 N3 C A2742 44.799 191.993 121.568 1.00 75.74 N
ATOM 18 C4 C A2742 43.839 191.751 122.464 1.00 75.90 C
ATOM 19 N4 C A2742 43.945 190.650 123.212 1.00 74.93 N
ATOM 20 C5 C A2742 42.729 192.629 122.637 1.00 76.60 C
ATOM 21 C6 C A2742 42.687 193.733 121.880 1.00 76.76 C
ATOM 22 P U A2743 39.678 195.059 117.598 1.00 76.59 P
ATOM 23 OP1 U A2743 38.970 195.782 116.499 1.00 75.44 O
ATOM 24 OP2 U A2743 38.888 194.313 118.622 1.00 74.06 O
ATOM 25 O5' U A2743 40.723 194.051 116.936 1.00 76.72 O
TER
ATOM 1 O3' C B2740 43.125 194.456 128.794 1.00 73.15 O
ATOM 2 P A B2741 41.540 194.193 128.782 1.00 73.54 P
ATOM 3 OP1 A B2741 40.909 195.531 128.871 1.00 73.38 O
ATOM 4 OP2 A B2741 41.206 193.148 129.791 1.00 72.10 O
ATOM 5 O5' A B2741 41.236 193.599 127.336 1.00 72.95 O
ATOM 6 C5' A B2741 39.926 193.719 126.762 1.00 72.78 C
ATOM 7 C4' A B2741 39.995 193.571 125.264 1.00 73.54 C
ATOM 8 O4' A B2741 40.464 192.232 124.940 1.00 73.68 O
ATOM 9 C3' A B2741 38.661 193.742 124.534 1.00 74.20 C
ATOM 10 O3' A B2741 38.902 194.280 123.238 1.00 74.82 O
ATOM 11 C2' A B2741 38.186 192.301 124.379 1.00 74.54 C
ATOM 12 O2' A B2741 37.264 192.120 123.316 1.00 73.71 O
ATOM 13 C1' A B2741 39.516 191.598 124.103 1.00 74.32 C
ATOM 14 N9 A B2741 39.537 190.160 124.364 1.00 72.71 N
ATOM 15 C8 A B2741 39.994 189.196 123.506 1.00 72.01 C
ATOM 16 N7 A B2741 39.877 187.979 123.969 1.00 72.45 N
ATOM 17 C5 A B2741 39.311 188.151 125.222 1.00 72.24 C
ATOM 18 C6 A B2741 38.930 187.237 126.217 1.00 72.40 C
ATOM 19 N6 A B2741 39.064 185.916 126.096 1.00 71.35 N
ATOM 20 N1 A B2741 38.396 187.734 127.352 1.00 72.70 N
ATOM 21 C2 A B2741 38.255 189.060 127.463 1.00 72.66 C
ATOM 22 N3 A B2741 38.571 190.018 126.595 1.00 71.98 N
ATOM 23 C4 A B2741 39.102 189.490 125.482 1.00 72.07 C
ATOM 24 P C B2742 39.168 195.852 123.058 1.00 75.38 P
ATOM 25 OP1 C B2742 39.506 196.404 124.391 1.00 75.90 O
ATOM 26 OP2 C B2742 38.034 196.430 122.287 1.00 74.80 O
ATOM 27 O5' C B2742 40.489 195.901 122.169 1.00 73.99 O
TER
ATOM 2 P C A2742 39.168 195.852 123.058 1.00 75.38 P
ATOM 3 OP1 C A2742 39.506 196.404 124.391 1.00 75.90 O
ATOM 4 OP2 C A2742 38.034 196.430 122.287 1.00 74.80 O
ATOM 5 O5' C A2742 40.489 195.901 122.169 1.00 73.99 O
ATOM 6 C5' C A2742 40.863 197.093 121.460 1.00 74.46 C
ATOM 7 C4' C A2742 41.862 196.765 120.374 1.00 75.10 C
ATOM 8 O4' C A2742 43.089 196.288 120.982 1.00 75.90 O
ATOM 9 C3' C A2742 41.465 195.648 119.419 1.00 74.82 C
ATOM 10 O3' C A2742 40.618 196.105 118.374 1.00 75.66 O
ATOM 11 C2' C A2742 42.815 195.176 118.903 1.00 74.94 C
ATOM 12 O2' C A2742 43.359 196.052 117.935 1.00 72.78 O
ATOM 13 C1' C A2742 43.653 195.259 120.179 1.00 76.29 C
ATOM 14 N1 C A2742 43.677 194.008 120.974 1.00 76.82 N
ATOM 15 C2 C A2742 44.745 193.109 120.802 1.00 76.30 C
ATOM 16 O2 C A2742 45.615 193.355 119.946 1.00 76.35 O
ATOM 17 N3 C A2742 44.799 191.993 121.568 1.00 75.74 N
ATOM 18 C4 C A2742 43.839 191.751 122.464 1.00 75.90 C
ATOM 19 N4 C A2742 43.945 190.650 123.212 1.00 74.93 N
ATOM 20 C5 C A2742 42.729 192.629 122.637 1.00 76.60 C
ATOM 21 C6 C A2742 42.687 193.733 121.880 1.00 76.76 C
ATOM 22 P U A2743 39.678 195.059 117.598 1.00 76.59 P
ATOM 23 OP1 U A2743 38.970 195.782 116.499 1.00 75.44 O
ATOM 24 OP2 U A2743 38.888 194.313 118.622 1.00 74.06 O
ATOM 25 O5' U A2743 40.723 194.051 116.936 1.00 76.72 O
TER
ATOM 1 O3' C B2740 43.125 194.456 128.794 1.00 73.15 O
ATOM 2 P A B2741 41.540 194.193 128.782 1.00 73.54 P
ATOM 3 OP1 A B2741 40.909 195.531 128.871 1.00 73.38 O
ATOM 4 OP2 A B2741 41.206 193.148 129.791 1.00 72.10 O
ATOM 5 O5' A B2741 41.236 193.599 127.336 1.00 72.95 O
ATOM 6 C5' A B2741 39.926 193.719 126.762 1.00 72.78 C
ATOM 7 C4' A B2741 39.995 193.571 125.264 1.00 73.54 C
ATOM 8 O4' A B2741 40.464 192.232 124.940 1.00 73.68 O
ATOM 9 C3' A B2741 38.661 193.742 124.534 1.00 74.20 C
ATOM 10 O3' A B2741 38.902 194.280 123.238 1.00 74.82 O
ATOM 11 C2' A B2741 38.186 192.301 124.379 1.00 74.54 C
ATOM 12 O2' A B2741 37.264 192.120 123.316 1.00 73.71 O
ATOM 13 C1' A B2741 39.516 191.598 124.103 1.00 74.32 C
ATOM 14 N9 A B2741 39.537 190.160 124.364 1.00 72.71 N
ATOM 15 C8 A B2741 39.994 189.196 123.506 1.00 72.01 C
ATOM 16 N7 A B2741 39.877 187.979 123.969 1.00 72.45 N
ATOM 17 C5 A B2741 39.311 188.151 125.222 1.00 72.24 C
ATOM 18 C6 A B2741 38.930 187.237 126.217 1.00 72.40 C
ATOM 19 N6 A B2741 39.064 185.916 126.096 1.00 71.35 N
ATOM 20 N1 A B2741 38.396 187.734 127.352 1.00 72.70 N
ATOM 21 C2 A B2741 38.255 189.060 127.463 1.00 72.66 C
ATOM 22 N3 A B2741 38.571 190.018 126.595 1.00 71.98 N
ATOM 23 C4 A B2741 39.102 189.490 125.482 1.00 72.07 C
ATOM 24 P C B2742 39.168 195.852 123.058 1.00 75.38 P
ATOM 25 OP1 C B2742 39.506 196.404 124.391 1.00 75.90 O
ATOM 26 OP2 C B2742 38.034 196.430 122.287 1.00 74.80 O
ATOM 27 O5' C B2742 40.489 195.901 122.169 1.00 73.99 O
TER
Atoms:
C2: (44.745,193.109,120.802)
OP1: (39.506,196.404,124.391)
OP2: (38.034,196.430,122.287)
C4: (43.839,191.751,122.464)
O5': (40.489,195.901,122.169)
C3': (41.465,195.648,119.419)
C1': (43.653,195.259,120.179)
O4': (43.089,196.288,120.982)
C5': (40.863,197.093,121.460)
P: (39.168,195.852,123.058)
O2: (45.615,193.355,119.946)
C4': (41.862,196.765,120.374)
C2': (42.815,195.176,118.903)
O2': (43.359,196.052,117.935)
N1: (43.677,194.008,120.974)
N3: (44.799,191.993,121.568)
N4: (43.945,190.650,123.212)
C6: (42.687,193.733,121.880)
C5: (42.729,192.629,122.637)
O3': (40.618,196.105,118.374)
OP1: (39.506,196.404,124.391)
OP2: (38.034,196.430,122.287)
C4: (43.839,191.751,122.464)
O5': (40.489,195.901,122.169)
C3': (41.465,195.648,119.419)
C1': (43.653,195.259,120.179)
O4': (43.089,196.288,120.982)
C5': (40.863,197.093,121.460)
P: (39.168,195.852,123.058)
O2: (45.615,193.355,119.946)
C4': (41.862,196.765,120.374)
C2': (42.815,195.176,118.903)
O2': (43.359,196.052,117.935)
N1: (43.677,194.008,120.974)
N3: (44.799,191.993,121.568)
N4: (43.945,190.650,123.212)
C6: (42.687,193.733,121.880)
C5: (42.729,192.629,122.637)
O3': (40.618,196.105,118.374)
OP1: (40.909,195.531,128.871)
OP2: (41.206,193.148,129.791)
C3': (38.661,193.742,124.534)
C1': (39.516,191.598,124.103)
C5': (39.926,193.719,126.762)
O4': (40.464,192.232,124.940)
C8: (39.994,189.196,123.506)
O2': (37.264,192.120,123.316)
C6: (38.930,187.237,126.217)
C5: (39.311,188.151,125.222)
C4: (39.102,189.490,125.482)
P: (41.540,194.193,128.782)
C4': (39.995,193.571,125.264)
C2': (38.186,192.301,124.379)
C2: (38.255,189.060,127.463)
N1: (38.396,187.734,127.352)
N3: (38.571,190.018,126.595)
N6: (39.064,185.916,126.096)
N7: (39.877,187.979,123.969)
N9: (39.537,190.160,124.364)
O5': (41.236,193.599,127.336)
O3': (38.902,194.280,123.238)
OP2: (41.206,193.148,129.791)
C3': (38.661,193.742,124.534)
C1': (39.516,191.598,124.103)
C5': (39.926,193.719,126.762)
O4': (40.464,192.232,124.940)
C8: (39.994,189.196,123.506)
O2': (37.264,192.120,123.316)
C6: (38.930,187.237,126.217)
C5: (39.311,188.151,125.222)
C4: (39.102,189.490,125.482)
P: (41.540,194.193,128.782)
C4': (39.995,193.571,125.264)
C2': (38.186,192.301,124.379)
C2: (38.255,189.060,127.463)
N1: (38.396,187.734,127.352)
N3: (38.571,190.018,126.595)
N6: (39.064,185.916,126.096)
N7: (39.877,187.979,123.969)
N9: (39.537,190.160,124.364)
O5': (41.236,193.599,127.336)
O3': (38.902,194.280,123.238)
Image (generated by PyMOL):