ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:A382:A381

Extra

PDB:
ATOM 1 O3' A A 381 -68.898 -25.465 107.403 1.00199.79 O
ATOM 2 P C A 382 -68.300 -24.277 106.492 1.00 76.70 P
ATOM 3 OP1 C A 382 -67.802 -23.198 107.390 1.00 69.15 O
ATOM 4 OP2 C A 382 -69.278 -23.949 105.421 1.00 68.94 O
ATOM 5 O5' C A 382 -67.029 -24.944 105.802 1.00 85.41 O
ATOM 6 C5' C A 382 -65.897 -24.149 105.417 1.00 85.41 C
ATOM 7 C4' C A 382 -64.713 -25.036 105.111 1.00 85.41 C
ATOM 8 O4' C A 382 -64.412 -25.841 106.280 1.00 85.41 O
ATOM 9 C3' C A 382 -64.894 -26.052 103.992 1.00 85.41 C
ATOM 10 O3' C A 382 -64.651 -25.492 102.704 1.00 85.41 O
ATOM 11 C2' C A 382 -63.859 -27.107 104.348 1.00 85.41 C
ATOM 12 O2' C A 382 -62.556 -26.741 103.947 1.00 85.41 O
ATOM 13 C1' C A 382 -63.938 -27.113 105.874 1.00 85.41 C
ATOM 14 N1 C A 382 -64.873 -28.144 106.361 1.00 40.75 N
ATOM 15 C2 C A 382 -64.600 -29.491 106.076 1.00 40.59 C
ATOM 16 O2 C A 382 -63.567 -29.776 105.452 1.00 40.51 O
ATOM 17 N3 C A 382 -65.465 -30.446 106.488 1.00 40.58 N
ATOM 18 C4 C A 382 -66.556 -30.105 107.163 1.00 40.68 C
ATOM 19 N4 C A 382 -67.382 -31.078 107.537 1.00 40.71 N
ATOM 20 C5 C A 382 -66.852 -28.747 107.484 1.00 40.56 C
ATOM 21 C6 C A 382 -65.992 -27.808 107.067 1.00 40.59 C
ATOM 22 P C A 383 -65.520 -25.984 101.440 1.00 66.09 P
ATOM 23 OP1 C A 383 -65.573 -24.823 100.509 1.00 53.25 O
ATOM 24 OP2 C A 383 -66.793 -26.622 101.909 1.00 53.40 O
ATOM 25 O5' C A 383 -64.613 -27.099 100.757 1.00 49.99 O
TER

ATOM 1 O3' U B 380 -68.463 -24.008 112.838 1.00105.52 O
ATOM 2 P A B 381 -68.439 -22.814 111.754 1.00134.98 P
ATOM 3 OP1 A B 381 -67.344 -23.080 110.780 1.00197.68 O
ATOM 4 OP2 A B 381 -68.448 -21.538 112.509 1.00197.68 O
ATOM 5 O5' A B 381 -69.841 -22.943 111.005 1.00199.79 O
ATOM 6 C5' A B 381 -69.909 -23.300 109.611 1.00199.79 C
ATOM 7 C4' A B 381 -69.992 -24.801 109.461 1.00199.79 C
ATOM 8 O4' A B 381 -71.134 -25.304 110.197 1.00199.79 O
ATOM 9 C3' A B 381 -70.170 -25.314 108.041 1.00199.79 C
ATOM 10 O3' A B 381 -68.898 -25.465 107.403 1.00199.79 O
ATOM 11 C2' A B 381 -70.847 -26.671 108.252 1.00199.79 C
ATOM 12 O2' A B 381 -69.932 -27.726 108.479 1.00199.79 O
ATOM 13 C1' A B 381 -71.662 -26.437 109.532 1.00199.79 C
ATOM 14 N9 A B 381 -73.101 -26.241 109.335 1.00199.79 N
ATOM 15 C8 A B 381 -73.739 -25.209 108.686 1.00199.79 C
ATOM 16 N7 A B 381 -75.047 -25.316 108.679 1.00199.79 N
ATOM 17 C5 A B 381 -75.291 -26.498 109.368 1.00199.79 C
ATOM 18 C6 A B 381 -76.485 -27.175 109.704 1.00199.79 C
ATOM 19 N6 A B 381 -77.706 -26.739 109.374 1.00199.79 N
ATOM 20 N1 A B 381 -76.378 -28.330 110.399 1.00199.79 N
ATOM 21 C2 A B 381 -75.155 -28.769 110.729 1.00199.79 C
ATOM 22 N3 A B 381 -73.963 -28.226 110.471 1.00199.79 N
ATOM 23 C4 A B 381 -74.101 -27.078 109.780 1.00199.79 C
ATOM 24 P C B 382 -68.300 -24.277 106.492 1.00 76.70 P
ATOM 25 OP1 C B 382 -67.802 -23.198 107.390 1.00 69.15 O
ATOM 26 OP2 C B 382 -69.278 -23.949 105.421 1.00 68.94 O
ATOM 27 O5' C B 382 -67.029 -24.944 105.802 1.00 85.41 O
TER

Atoms:
C2: (-64.600,-29.491,106.076)
OP1: (-67.802,-23.198,107.390)
OP2: (-69.278,-23.949,105.421)
C4: (-66.556,-30.105,107.163)
O5': (-67.029,-24.944,105.802)
C3': (-64.894,-26.052,103.992)
C1': (-63.938,-27.113,105.874)
O4': (-64.412,-25.841,106.280)
C5': (-65.897,-24.149,105.417)
P: (-68.300,-24.277,106.492)
O2: (-63.567,-29.776,105.452)
C4': (-64.713,-25.036,105.111)
C2': (-63.859,-27.107,104.348)
O2': (-62.556,-26.741,103.947)
N1: (-64.873,-28.144,106.361)
N3: (-65.465,-30.446,106.488)
N4: (-67.382,-31.078,107.537)
C6: (-65.992,-27.808,107.067)
C5: (-66.852,-28.747,107.484)
O3': (-64.651,-25.492,102.704)
OP1: (-67.344,-23.080,110.780)
OP2: (-68.448,-21.538,112.509)
C3': (-70.170,-25.314,108.041)
C1': (-71.662,-26.437,109.532)
C5': (-69.909,-23.300,109.611)
O4': (-71.134,-25.304,110.197)
C8: (-73.739,-25.209,108.686)
O2': (-69.932,-27.726,108.479)
C6: (-76.485,-27.175,109.704)
C5: (-75.291,-26.498,109.368)
C4: (-74.101,-27.078,109.780)
P: (-68.439,-22.814,111.754)
C4': (-69.992,-24.801,109.461)
C2': (-70.847,-26.671,108.252)
C2: (-75.155,-28.769,110.729)
N1: (-76.378,-28.330,110.399)
N3: (-73.963,-28.226,110.471)
N6: (-77.706,-26.739,109.374)
N7: (-75.047,-25.316,108.679)
N9: (-73.101,-26.241,109.335)
O5': (-69.841,-22.943,111.005)
O3': (-68.898,-25.465,107.403)
Image (generated by PyMOL):
PyMOL image
show in jmol