Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1119:A1120
Extra
PDB:
ATOM 1 O3' G A1118 101.229-113.180 -32.524 1.00 47.77 O
ATOM 2 P G A1119 101.847-112.583 -33.897 1.00 51.34 P
ATOM 3 OP1 G A1119 101.301-113.334 -35.050 1.00 57.57 O
ATOM 4 OP2 G A1119 103.315-112.437 -33.761 1.00 43.11 O
ATOM 5 O5' G A1119 101.325-111.080 -33.968 1.00 50.78 O
ATOM 6 C5' G A1119 99.990-110.732 -33.624 1.00 56.13 C
ATOM 7 C4' G A1119 99.853-109.233 -33.576 1.00 55.05 C
ATOM 8 O4' G A1119 100.503-108.715 -32.389 1.00 55.67 O
ATOM 9 C3' G A1119 100.569-108.536 -34.706 1.00 55.53 C
ATOM 10 O3' G A1119 99.821-108.533 -35.894 1.00 51.31 O
ATOM 11 C2' G A1119 100.875-107.152 -34.148 1.00 50.47 C
ATOM 12 O2' G A1119 99.822-106.224 -34.266 1.00 52.71 O
ATOM 13 C1' G A1119 101.106-107.463 -32.674 1.00 48.87 C
ATOM 14 N9 G A1119 102.513-107.520 -32.294 1.00 50.83 N
ATOM 15 C8 G A1119 103.237-108.634 -31.964 1.00 52.38 C
ATOM 16 N7 G A1119 104.468-108.363 -31.637 1.00 54.10 N
ATOM 17 C5 G A1119 104.568-106.988 -31.770 1.00 53.46 C
ATOM 18 C6 G A1119 105.676-106.113 -31.555 1.00 49.08 C
ATOM 19 O6 G A1119 106.823-106.392 -31.158 1.00 44.40 O
ATOM 20 N1 G A1119 105.345-104.794 -31.836 1.00 47.86 N
ATOM 21 C2 G A1119 104.106-104.365 -32.243 1.00 46.49 C
ATOM 22 N2 G A1119 103.977-103.058 -32.439 1.00 47.93 N
ATOM 23 N3 G A1119 103.069-105.162 -32.435 1.00 52.19 N
ATOM 24 C4 G A1119 103.371-106.453 -32.183 1.00 54.46 C
ATOM 25 P U A1120 100.601-108.410 -37.284 1.00 55.35 P
ATOM 26 OP1 U A1120 99.609-108.658 -38.362 1.00 58.72 O
ATOM 27 OP2 U A1120 101.838-109.235 -37.211 1.00 52.32 O
ATOM 28 O5' U A1120 101.066-106.890 -37.317 1.00 61.08 O
TER
ATOM 1 O3' G B1119 99.821-108.533 -35.894 1.00 51.31 O
ATOM 2 P U B1120 100.601-108.410 -37.284 1.00 55.35 P
ATOM 3 OP1 U B1120 99.609-108.658 -38.362 1.00 58.72 O
ATOM 4 OP2 U B1120 101.838-109.235 -37.211 1.00 52.32 O
ATOM 5 O5' U B1120 101.066-106.890 -37.317 1.00 61.08 O
ATOM 6 C5' U B1120 100.106-105.845 -37.369 1.00 59.30 C
ATOM 7 C4' U B1120 100.797-104.514 -37.333 1.00 58.78 C
ATOM 8 O4' U B1120 101.434-104.362 -36.043 1.00 54.34 O
ATOM 9 C3' U B1120 101.924-104.332 -38.338 1.00 60.23 C
ATOM 10 O3' U B1120 101.479-103.888 -39.617 1.00 69.10 O
ATOM 11 C2' U B1120 102.779-103.279 -37.665 1.00 58.14 C
ATOM 12 O2' U B1120 102.203-102.007 -37.828 1.00 58.53 O
ATOM 13 C1' U B1120 102.657-103.681 -36.202 1.00 54.04 C
ATOM 14 N1 U B1120 103.750-104.574 -35.803 1.00 54.60 N
ATOM 15 C2 U B1120 104.939-103.979 -35.415 1.00 58.78 C
ATOM 16 O2 U B1120 105.107-102.773 -35.424 1.00 59.12 O
ATOM 17 N3 U B1120 105.925-104.847 -35.022 1.00 59.40 N
ATOM 18 C4 U B1120 105.854-106.222 -34.981 1.00 55.04 C
ATOM 19 O4 U B1120 106.810-106.856 -34.537 1.00 49.20 O
ATOM 20 C5 U B1120 104.599-106.774 -35.419 1.00 57.19 C
ATOM 21 C6 U B1120 103.613-105.951 -35.807 1.00 56.72 C
ATOM 22 P C B1121 102.452-104.028 -40.895 1.00 80.41 P
ATOM 23 OP1 C B1121 101.690-103.614 -42.098 1.00 80.82 O
ATOM 24 OP2 C B1121 103.104-105.371 -40.859 1.00 69.51 O
ATOM 25 O5' C B1121 103.571-102.931 -40.630 1.00 65.05 O
TER
ATOM 2 P G A1119 101.847-112.583 -33.897 1.00 51.34 P
ATOM 3 OP1 G A1119 101.301-113.334 -35.050 1.00 57.57 O
ATOM 4 OP2 G A1119 103.315-112.437 -33.761 1.00 43.11 O
ATOM 5 O5' G A1119 101.325-111.080 -33.968 1.00 50.78 O
ATOM 6 C5' G A1119 99.990-110.732 -33.624 1.00 56.13 C
ATOM 7 C4' G A1119 99.853-109.233 -33.576 1.00 55.05 C
ATOM 8 O4' G A1119 100.503-108.715 -32.389 1.00 55.67 O
ATOM 9 C3' G A1119 100.569-108.536 -34.706 1.00 55.53 C
ATOM 10 O3' G A1119 99.821-108.533 -35.894 1.00 51.31 O
ATOM 11 C2' G A1119 100.875-107.152 -34.148 1.00 50.47 C
ATOM 12 O2' G A1119 99.822-106.224 -34.266 1.00 52.71 O
ATOM 13 C1' G A1119 101.106-107.463 -32.674 1.00 48.87 C
ATOM 14 N9 G A1119 102.513-107.520 -32.294 1.00 50.83 N
ATOM 15 C8 G A1119 103.237-108.634 -31.964 1.00 52.38 C
ATOM 16 N7 G A1119 104.468-108.363 -31.637 1.00 54.10 N
ATOM 17 C5 G A1119 104.568-106.988 -31.770 1.00 53.46 C
ATOM 18 C6 G A1119 105.676-106.113 -31.555 1.00 49.08 C
ATOM 19 O6 G A1119 106.823-106.392 -31.158 1.00 44.40 O
ATOM 20 N1 G A1119 105.345-104.794 -31.836 1.00 47.86 N
ATOM 21 C2 G A1119 104.106-104.365 -32.243 1.00 46.49 C
ATOM 22 N2 G A1119 103.977-103.058 -32.439 1.00 47.93 N
ATOM 23 N3 G A1119 103.069-105.162 -32.435 1.00 52.19 N
ATOM 24 C4 G A1119 103.371-106.453 -32.183 1.00 54.46 C
ATOM 25 P U A1120 100.601-108.410 -37.284 1.00 55.35 P
ATOM 26 OP1 U A1120 99.609-108.658 -38.362 1.00 58.72 O
ATOM 27 OP2 U A1120 101.838-109.235 -37.211 1.00 52.32 O
ATOM 28 O5' U A1120 101.066-106.890 -37.317 1.00 61.08 O
TER
ATOM 1 O3' G B1119 99.821-108.533 -35.894 1.00 51.31 O
ATOM 2 P U B1120 100.601-108.410 -37.284 1.00 55.35 P
ATOM 3 OP1 U B1120 99.609-108.658 -38.362 1.00 58.72 O
ATOM 4 OP2 U B1120 101.838-109.235 -37.211 1.00 52.32 O
ATOM 5 O5' U B1120 101.066-106.890 -37.317 1.00 61.08 O
ATOM 6 C5' U B1120 100.106-105.845 -37.369 1.00 59.30 C
ATOM 7 C4' U B1120 100.797-104.514 -37.333 1.00 58.78 C
ATOM 8 O4' U B1120 101.434-104.362 -36.043 1.00 54.34 O
ATOM 9 C3' U B1120 101.924-104.332 -38.338 1.00 60.23 C
ATOM 10 O3' U B1120 101.479-103.888 -39.617 1.00 69.10 O
ATOM 11 C2' U B1120 102.779-103.279 -37.665 1.00 58.14 C
ATOM 12 O2' U B1120 102.203-102.007 -37.828 1.00 58.53 O
ATOM 13 C1' U B1120 102.657-103.681 -36.202 1.00 54.04 C
ATOM 14 N1 U B1120 103.750-104.574 -35.803 1.00 54.60 N
ATOM 15 C2 U B1120 104.939-103.979 -35.415 1.00 58.78 C
ATOM 16 O2 U B1120 105.107-102.773 -35.424 1.00 59.12 O
ATOM 17 N3 U B1120 105.925-104.847 -35.022 1.00 59.40 N
ATOM 18 C4 U B1120 105.854-106.222 -34.981 1.00 55.04 C
ATOM 19 O4 U B1120 106.810-106.856 -34.537 1.00 49.20 O
ATOM 20 C5 U B1120 104.599-106.774 -35.419 1.00 57.19 C
ATOM 21 C6 U B1120 103.613-105.951 -35.807 1.00 56.72 C
ATOM 22 P C B1121 102.452-104.028 -40.895 1.00 80.41 P
ATOM 23 OP1 C B1121 101.690-103.614 -42.098 1.00 80.82 O
ATOM 24 OP2 C B1121 103.104-105.371 -40.859 1.00 69.51 O
ATOM 25 O5' C B1121 103.571-102.931 -40.630 1.00 65.05 O
TER
Atoms:
OP1: (101.301,-113.334,-35.050)
OP2: (103.315,-112.437,-33.761)
C3': (100.569,-108.536,-34.706)
C1': (101.106,-107.463,-32.674)
C5': (99.990,-110.732,-33.624)
O6: (106.823,-106.392,-31.158)
O4': (100.503,-108.715,-32.389)
C8: (103.237,-108.634,-31.964)
C2: (104.106,-104.365,-32.243)
C6: (105.676,-106.113,-31.555)
C5: (104.568,-106.988,-31.770)
C4: (103.371,-106.453,-32.183)
P: (101.847,-112.583,-33.897)
C4': (99.853,-109.233,-33.576)
C2': (100.875,-107.152,-34.148)
O2': (99.822,-106.224,-34.266)
N1: (105.345,-104.794,-31.836)
N2: (103.977,-103.058,-32.439)
N3: (103.069,-105.162,-32.435)
N7: (104.468,-108.363,-31.637)
N9: (102.513,-107.520,-32.294)
O5': (101.325,-111.080,-33.968)
O3': (99.821,-108.533,-35.894)
OP2: (103.315,-112.437,-33.761)
C3': (100.569,-108.536,-34.706)
C1': (101.106,-107.463,-32.674)
C5': (99.990,-110.732,-33.624)
O6: (106.823,-106.392,-31.158)
O4': (100.503,-108.715,-32.389)
C8: (103.237,-108.634,-31.964)
C2: (104.106,-104.365,-32.243)
C6: (105.676,-106.113,-31.555)
C5: (104.568,-106.988,-31.770)
C4: (103.371,-106.453,-32.183)
P: (101.847,-112.583,-33.897)
C4': (99.853,-109.233,-33.576)
C2': (100.875,-107.152,-34.148)
O2': (99.822,-106.224,-34.266)
N1: (105.345,-104.794,-31.836)
N2: (103.977,-103.058,-32.439)
N3: (103.069,-105.162,-32.435)
N7: (104.468,-108.363,-31.637)
N9: (102.513,-107.520,-32.294)
O5': (101.325,-111.080,-33.968)
O3': (99.821,-108.533,-35.894)
C4: (105.854,-106.222,-34.981)
N3: (105.925,-104.847,-35.022)
OP1: (99.609,-108.658,-38.362)
OP2: (101.838,-109.235,-37.211)
C2: (104.939,-103.979,-35.415)
C1': (102.657,-103.681,-36.202)
C3': (101.924,-104.332,-38.338)
O5': (101.066,-106.890,-37.317)
O4': (101.434,-104.362,-36.043)
C5': (100.106,-105.845,-37.369)
P: (100.601,-108.410,-37.284)
C4': (100.797,-104.514,-37.333)
C2': (102.779,-103.279,-37.665)
O2': (102.203,-102.007,-37.828)
N1: (103.750,-104.574,-35.803)
O4: (106.810,-106.856,-34.537)
O2: (105.107,-102.773,-35.424)
C6: (103.613,-105.951,-35.807)
C5: (104.599,-106.774,-35.419)
O3': (101.479,-103.888,-39.617)
N3: (105.925,-104.847,-35.022)
OP1: (99.609,-108.658,-38.362)
OP2: (101.838,-109.235,-37.211)
C2: (104.939,-103.979,-35.415)
C1': (102.657,-103.681,-36.202)
C3': (101.924,-104.332,-38.338)
O5': (101.066,-106.890,-37.317)
O4': (101.434,-104.362,-36.043)
C5': (100.106,-105.845,-37.369)
P: (100.601,-108.410,-37.284)
C4': (100.797,-104.514,-37.333)
C2': (102.779,-103.279,-37.665)
O2': (102.203,-102.007,-37.828)
N1: (103.750,-104.574,-35.803)
O4: (106.810,-106.856,-34.537)
O2: (105.107,-102.773,-35.424)
C6: (103.613,-105.951,-35.807)
C5: (104.599,-106.774,-35.419)
O3': (101.479,-103.888,-39.617)
Image (generated by PyMOL):