Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3G9C:Q28:Q27
Extra
PDB:
ATOM 1 O3' A A 27 5.627 -29.937 36.913 1.00 45.89 O
ATOM 2 P C A 28 6.415 -28.609 36.496 1.00 46.07 P
ATOM 3 OP1 C A 28 5.919 -27.500 37.342 1.00 46.31 O
ATOM 4 OP2 C A 28 6.363 -28.492 35.021 1.00 46.17 O
ATOM 5 O5' C A 28 7.924 -28.943 36.911 1.00 46.14 O
ATOM 6 C5' C A 28 8.977 -28.071 36.518 1.00 46.35 C
ATOM 7 C4' C A 28 10.309 -28.547 37.071 1.00 46.50 C
ATOM 8 O4' C A 28 10.218 -28.670 38.513 1.00 46.16 O
ATOM 9 C3' C A 28 10.754 -29.918 36.584 1.00 46.80 C
ATOM 10 O3' C A 28 11.482 -29.790 35.369 1.00 47.91 O
ATOM 11 C2' C A 28 11.650 -30.383 37.727 1.00 46.37 C
ATOM 12 O2' C A 28 12.954 -29.843 37.642 1.00 46.45 O
ATOM 13 C1' C A 28 10.924 -29.818 38.945 1.00 45.80 C
ATOM 14 N1 C A 28 9.951 -30.771 39.549 1.00 45.15 N
ATOM 15 C2 C A 28 10.418 -31.925 40.188 1.00 44.84 C
ATOM 16 O2 C A 28 11.636 -32.134 40.241 1.00 45.08 O
ATOM 17 N3 C A 28 9.519 -32.782 40.733 1.00 44.41 N
ATOM 18 C4 C A 28 8.214 -32.520 40.654 1.00 44.25 C
ATOM 19 N4 C A 28 7.366 -33.394 41.206 1.00 44.19 N
ATOM 20 C5 C A 28 7.719 -31.349 40.007 1.00 44.40 C
ATOM 21 C6 C A 28 8.614 -30.511 39.474 1.00 44.78 C
ATOM 22 P G A 29 10.883 -30.382 34.009 1.00 49.42 P
ATOM 23 OP1 G A 29 10.682 -29.260 33.067 1.00 49.67 O
ATOM 24 OP2 G A 29 9.731 -31.254 34.349 1.00 49.33 O
ATOM 25 O5' G A 29 12.098 -31.252 33.424 1.00 49.35 O
TER
ATOM 1 O3' G B 26 0.381 -27.371 39.606 1.00 43.77 O
ATOM 2 P A B 27 0.535 -28.623 38.622 1.00 44.62 P
ATOM 3 OP1 A B 27 0.638 -28.105 37.239 1.00 44.25 O
ATOM 4 OP2 A B 27 -0.516 -29.606 38.966 1.00 44.56 O
ATOM 5 O5' A B 27 1.961 -29.224 39.030 1.00 44.25 O
ATOM 6 C5' A B 27 3.087 -28.363 39.153 1.00 44.51 C
ATOM 7 C4' A B 27 4.366 -29.095 38.789 1.00 44.60 C
ATOM 8 O4' A B 27 4.645 -30.103 39.793 1.00 44.43 O
ATOM 9 C3' A B 27 4.320 -29.845 37.465 1.00 45.03 C
ATOM 10 O3' A B 27 5.627 -29.937 36.913 1.00 45.89 O
ATOM 11 C2' A B 27 3.793 -31.211 37.889 1.00 44.86 C
ATOM 12 O2' A B 27 4.189 -32.239 37.003 1.00 45.14 O
ATOM 13 C1' A B 27 4.468 -31.396 39.245 1.00 44.22 C
ATOM 14 N9 A B 27 3.679 -32.188 40.183 1.00 43.35 N
ATOM 15 C8 A B 27 2.390 -32.613 40.021 1.00 42.81 C
ATOM 16 N7 A B 27 1.932 -33.312 41.032 1.00 42.72 N
ATOM 17 C5 A B 27 2.995 -33.349 41.920 1.00 42.58 C
ATOM 18 C6 A B 27 3.151 -33.938 43.190 1.00 42.56 C
ATOM 19 N6 A B 27 2.187 -34.633 43.803 1.00 42.67 N
ATOM 20 N1 A B 27 4.341 -33.786 43.807 1.00 42.75 N
ATOM 21 C2 A B 27 5.303 -33.090 43.190 1.00 42.65 C
ATOM 22 N3 A B 27 5.274 -32.491 42.000 1.00 42.83 N
ATOM 23 C4 A B 27 4.080 -32.660 41.412 1.00 42.98 C
ATOM 24 P C B 28 6.415 -28.609 36.496 1.00 46.07 P
ATOM 25 OP1 C B 28 5.919 -27.500 37.342 1.00 46.31 O
ATOM 26 OP2 C B 28 6.363 -28.492 35.021 1.00 46.17 O
ATOM 27 O5' C B 28 7.924 -28.943 36.911 1.00 46.14 O
TER
ATOM 2 P C A 28 6.415 -28.609 36.496 1.00 46.07 P
ATOM 3 OP1 C A 28 5.919 -27.500 37.342 1.00 46.31 O
ATOM 4 OP2 C A 28 6.363 -28.492 35.021 1.00 46.17 O
ATOM 5 O5' C A 28 7.924 -28.943 36.911 1.00 46.14 O
ATOM 6 C5' C A 28 8.977 -28.071 36.518 1.00 46.35 C
ATOM 7 C4' C A 28 10.309 -28.547 37.071 1.00 46.50 C
ATOM 8 O4' C A 28 10.218 -28.670 38.513 1.00 46.16 O
ATOM 9 C3' C A 28 10.754 -29.918 36.584 1.00 46.80 C
ATOM 10 O3' C A 28 11.482 -29.790 35.369 1.00 47.91 O
ATOM 11 C2' C A 28 11.650 -30.383 37.727 1.00 46.37 C
ATOM 12 O2' C A 28 12.954 -29.843 37.642 1.00 46.45 O
ATOM 13 C1' C A 28 10.924 -29.818 38.945 1.00 45.80 C
ATOM 14 N1 C A 28 9.951 -30.771 39.549 1.00 45.15 N
ATOM 15 C2 C A 28 10.418 -31.925 40.188 1.00 44.84 C
ATOM 16 O2 C A 28 11.636 -32.134 40.241 1.00 45.08 O
ATOM 17 N3 C A 28 9.519 -32.782 40.733 1.00 44.41 N
ATOM 18 C4 C A 28 8.214 -32.520 40.654 1.00 44.25 C
ATOM 19 N4 C A 28 7.366 -33.394 41.206 1.00 44.19 N
ATOM 20 C5 C A 28 7.719 -31.349 40.007 1.00 44.40 C
ATOM 21 C6 C A 28 8.614 -30.511 39.474 1.00 44.78 C
ATOM 22 P G A 29 10.883 -30.382 34.009 1.00 49.42 P
ATOM 23 OP1 G A 29 10.682 -29.260 33.067 1.00 49.67 O
ATOM 24 OP2 G A 29 9.731 -31.254 34.349 1.00 49.33 O
ATOM 25 O5' G A 29 12.098 -31.252 33.424 1.00 49.35 O
TER
ATOM 1 O3' G B 26 0.381 -27.371 39.606 1.00 43.77 O
ATOM 2 P A B 27 0.535 -28.623 38.622 1.00 44.62 P
ATOM 3 OP1 A B 27 0.638 -28.105 37.239 1.00 44.25 O
ATOM 4 OP2 A B 27 -0.516 -29.606 38.966 1.00 44.56 O
ATOM 5 O5' A B 27 1.961 -29.224 39.030 1.00 44.25 O
ATOM 6 C5' A B 27 3.087 -28.363 39.153 1.00 44.51 C
ATOM 7 C4' A B 27 4.366 -29.095 38.789 1.00 44.60 C
ATOM 8 O4' A B 27 4.645 -30.103 39.793 1.00 44.43 O
ATOM 9 C3' A B 27 4.320 -29.845 37.465 1.00 45.03 C
ATOM 10 O3' A B 27 5.627 -29.937 36.913 1.00 45.89 O
ATOM 11 C2' A B 27 3.793 -31.211 37.889 1.00 44.86 C
ATOM 12 O2' A B 27 4.189 -32.239 37.003 1.00 45.14 O
ATOM 13 C1' A B 27 4.468 -31.396 39.245 1.00 44.22 C
ATOM 14 N9 A B 27 3.679 -32.188 40.183 1.00 43.35 N
ATOM 15 C8 A B 27 2.390 -32.613 40.021 1.00 42.81 C
ATOM 16 N7 A B 27 1.932 -33.312 41.032 1.00 42.72 N
ATOM 17 C5 A B 27 2.995 -33.349 41.920 1.00 42.58 C
ATOM 18 C6 A B 27 3.151 -33.938 43.190 1.00 42.56 C
ATOM 19 N6 A B 27 2.187 -34.633 43.803 1.00 42.67 N
ATOM 20 N1 A B 27 4.341 -33.786 43.807 1.00 42.75 N
ATOM 21 C2 A B 27 5.303 -33.090 43.190 1.00 42.65 C
ATOM 22 N3 A B 27 5.274 -32.491 42.000 1.00 42.83 N
ATOM 23 C4 A B 27 4.080 -32.660 41.412 1.00 42.98 C
ATOM 24 P C B 28 6.415 -28.609 36.496 1.00 46.07 P
ATOM 25 OP1 C B 28 5.919 -27.500 37.342 1.00 46.31 O
ATOM 26 OP2 C B 28 6.363 -28.492 35.021 1.00 46.17 O
ATOM 27 O5' C B 28 7.924 -28.943 36.911 1.00 46.14 O
TER
Atoms:
C2: (10.418,-31.925,40.188)
OP1: (5.919,-27.500,37.342)
OP2: (6.363,-28.492,35.021)
C4: (8.214,-32.520,40.654)
O5': (7.924,-28.943,36.911)
C3': (10.754,-29.918,36.584)
C1': (10.924,-29.818,38.945)
O4': (10.218,-28.670,38.513)
C5': (8.977,-28.071,36.518)
P: (6.415,-28.609,36.496)
O2: (11.636,-32.134,40.241)
C4': (10.309,-28.547,37.071)
C2': (11.650,-30.383,37.727)
O2': (12.954,-29.843,37.642)
N1: (9.951,-30.771,39.549)
N3: (9.519,-32.782,40.733)
N4: (7.366,-33.394,41.206)
C6: (8.614,-30.511,39.474)
C5: (7.719,-31.349,40.007)
O3': (11.482,-29.790,35.369)
OP1: (5.919,-27.500,37.342)
OP2: (6.363,-28.492,35.021)
C4: (8.214,-32.520,40.654)
O5': (7.924,-28.943,36.911)
C3': (10.754,-29.918,36.584)
C1': (10.924,-29.818,38.945)
O4': (10.218,-28.670,38.513)
C5': (8.977,-28.071,36.518)
P: (6.415,-28.609,36.496)
O2: (11.636,-32.134,40.241)
C4': (10.309,-28.547,37.071)
C2': (11.650,-30.383,37.727)
O2': (12.954,-29.843,37.642)
N1: (9.951,-30.771,39.549)
N3: (9.519,-32.782,40.733)
N4: (7.366,-33.394,41.206)
C6: (8.614,-30.511,39.474)
C5: (7.719,-31.349,40.007)
O3': (11.482,-29.790,35.369)
OP1: (0.638,-28.105,37.239)
OP2: (-0.516,-29.606,38.966)
C3': (4.320,-29.845,37.465)
C1': (4.468,-31.396,39.245)
C5': (3.087,-28.363,39.153)
O4': (4.645,-30.103,39.793)
C8: (2.390,-32.613,40.021)
O2': (4.189,-32.239,37.003)
C6: (3.151,-33.938,43.190)
C5: (2.995,-33.349,41.920)
C4: (4.080,-32.660,41.412)
P: (0.535,-28.623,38.622)
C4': (4.366,-29.095,38.789)
C2': (3.793,-31.211,37.889)
C2: (5.303,-33.090,43.190)
N1: (4.341,-33.786,43.807)
N3: (5.274,-32.491,42.000)
N6: (2.187,-34.633,43.803)
N7: (1.932,-33.312,41.032)
N9: (3.679,-32.188,40.183)
O5': (1.961,-29.224,39.030)
O3': (5.627,-29.937,36.913)
OP2: (-0.516,-29.606,38.966)
C3': (4.320,-29.845,37.465)
C1': (4.468,-31.396,39.245)
C5': (3.087,-28.363,39.153)
O4': (4.645,-30.103,39.793)
C8: (2.390,-32.613,40.021)
O2': (4.189,-32.239,37.003)
C6: (3.151,-33.938,43.190)
C5: (2.995,-33.349,41.920)
C4: (4.080,-32.660,41.412)
P: (0.535,-28.623,38.622)
C4': (4.366,-29.095,38.789)
C2': (3.793,-31.211,37.889)
C2: (5.303,-33.090,43.190)
N1: (4.341,-33.786,43.807)
N3: (5.274,-32.491,42.000)
N6: (2.187,-34.633,43.803)
N7: (1.932,-33.312,41.032)
N9: (3.679,-32.188,40.183)
O5': (1.961,-29.224,39.030)
O3': (5.627,-29.937,36.913)
Image (generated by PyMOL):