ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHZ:A1480:A1399

Extra

PDB:
ATOM 1 O3' G A1479 4.550 -62.096 10.916 1.00 96.26 O
ATOM 2 P C A1480 4.602 -63.688 10.758 1.00 97.35 P
ATOM 3 OP1 C A1480 4.784 -64.262 12.109 1.00105.24 O
ATOM 4 OP2 C A1480 5.600 -63.996 9.718 1.00 83.15 O
ATOM 5 O5' C A1480 3.147 -64.000 10.225 1.00122.90 O
ATOM 6 C5' C A1480 2.931 -65.043 9.312 1.00134.37 C
ATOM 7 C4' C A1480 2.154 -66.146 9.946 1.00144.21 C
ATOM 8 O4' C A1480 0.969 -65.587 10.572 1.00146.74 O
ATOM 9 C3' C A1480 1.660 -67.216 8.986 1.00149.89 C
ATOM 10 O3' C A1480 1.658 -68.469 9.656 1.00139.95 O
ATOM 11 C2' C A1480 0.225 -66.779 8.717 1.00152.07 C
ATOM 12 O2' C A1480 -0.628 -67.812 8.273 1.00157.61 O
ATOM 13 C1' C A1480 -0.170 -66.264 10.090 1.00152.15 C
ATOM 14 N1 C A1480 -1.308 -65.329 10.099 1.00168.01 N
ATOM 15 C2 C A1480 -2.438 -65.741 10.827 1.00176.29 C
ATOM 16 O2 C A1480 -2.409 -66.855 11.385 1.00174.25 O
ATOM 17 N3 C A1480 -3.527 -64.931 10.903 1.00172.27 N
ATOM 18 C4 C A1480 -3.510 -63.745 10.292 1.00164.89 C
ATOM 19 N4 C A1480 -4.606 -62.983 10.392 1.00154.74 N
ATOM 20 C5 C A1480 -2.360 -63.306 9.554 1.00166.23 C
ATOM 21 C6 C A1480 -1.282 -64.111 9.481 1.00162.38 C
ATOM 22 P C A1481 1.724 -69.821 8.807 1.00181.69 P
ATOM 23 OP1 C A1481 2.772 -70.671 9.421 1.00184.58 O
ATOM 24 OP2 C A1481 1.858 -69.436 7.383 1.00183.88 O
ATOM 25 O5' C A1481 0.290 -70.457 9.051 1.00189.49 O
TER

ATOM 1 O3' G B1398 -5.786 -55.108 9.354 1.00 86.80 O
ATOM 2 P A B1399 -7.017 -55.521 10.295 1.00 93.04 P
ATOM 3 OP1 A B1399 -8.274 -55.149 9.571 1.00128.57 O
ATOM 4 OP2 A B1399 -6.763 -54.950 11.634 1.00106.70 O
ATOM 5 O5' A B1399 -6.878 -57.089 10.343 1.00 84.44 O
ATOM 6 C5' A B1399 -5.963 -57.704 11.213 1.00 88.42 C
ATOM 7 C4' A B1399 -4.972 -58.558 10.465 1.00 86.97 C
ATOM 8 O4' A B1399 -3.979 -57.702 9.835 1.00 82.07 O
ATOM 9 C3' A B1399 -4.170 -59.509 11.345 1.00101.01 C
ATOM 10 O3' A B1399 -4.807 -60.765 11.525 1.00 97.52 O
ATOM 11 C2' A B1399 -2.811 -59.585 10.667 1.00 94.56 C
ATOM 12 O2' A B1399 -2.850 -60.488 9.577 1.00 98.81 O
ATOM 13 C1' A B1399 -2.675 -58.172 10.116 1.00 88.10 C
ATOM 14 N9 A B1399 -2.043 -57.243 11.084 1.00 74.88 N
ATOM 15 C8 A B1399 -2.708 -56.225 11.700 1.00 79.77 C
ATOM 16 N7 A B1399 -1.983 -55.490 12.489 1.00 85.53 N
ATOM 17 C5 A B1399 -0.719 -56.045 12.393 1.00 89.75 C
ATOM 18 C6 A B1399 0.511 -55.696 13.012 1.00 86.88 C
ATOM 19 N6 A B1399 0.621 -54.672 13.869 1.00 81.16 N
ATOM 20 N1 A B1399 1.617 -56.434 12.724 1.00 78.25 N
ATOM 21 C2 A B1399 1.462 -57.456 11.875 1.00 83.27 C
ATOM 22 N3 A B1399 0.350 -57.873 11.236 1.00 95.17 N
ATOM 23 C4 A B1399 -0.735 -57.125 11.526 1.00 85.93 C
ATOM 24 P G B1400 -5.778 -60.993 12.787 1.00 98.55 P
ATOM 25 OP1 G B1400 -5.360 -62.258 13.437 1.00112.63 O
ATOM 26 OP2 G B1400 -7.167 -60.871 12.299 1.00113.05 O
ATOM 27 O5' G B1400 -5.428 -59.761 13.723 1.00122.24 O
TER

Atoms:
C2: (-2.438,-65.741,10.827)
OP1: (4.784,-64.262,12.109)
OP2: (5.600,-63.996,9.718)
C4: (-3.510,-63.745,10.292)
O5': (3.147,-64.000,10.225)
C3': (1.660,-67.216,8.986)
C1': (-0.170,-66.264,10.090)
O4': (0.969,-65.587,10.572)
C5': (2.931,-65.043,9.312)
P: (4.602,-63.688,10.758)
O2: (-2.409,-66.855,11.385)
C4': (2.154,-66.146,9.946)
C2': (0.225,-66.779,8.717)
O2': (-0.628,-67.812,8.273)
N1: (-1.308,-65.329,10.099)
N3: (-3.527,-64.931,10.903)
N4: (-4.606,-62.983,10.392)
C6: (-1.282,-64.111,9.481)
C5: (-2.360,-63.306,9.554)
O3': (1.658,-68.469,9.656)
OP1: (-8.274,-55.149,9.571)
OP2: (-6.763,-54.950,11.634)
C3': (-4.170,-59.509,11.345)
C1': (-2.675,-58.172,10.116)
C5': (-5.963,-57.704,11.213)
O4': (-3.979,-57.702,9.835)
C8: (-2.708,-56.225,11.700)
O2': (-2.850,-60.488,9.577)
C6: (0.511,-55.696,13.012)
C5: (-0.719,-56.045,12.393)
C4: (-0.735,-57.125,11.526)
P: (-7.017,-55.521,10.295)
C4': (-4.972,-58.558,10.465)
C2': (-2.811,-59.585,10.667)
C2: (1.462,-57.456,11.875)
N1: (1.617,-56.434,12.724)
N3: (0.350,-57.873,11.236)
N6: (0.621,-54.672,13.869)
N7: (-1.983,-55.490,12.489)
N9: (-2.043,-57.243,11.084)
O5': (-6.878,-57.089,10.343)
O3': (-4.807,-60.765,11.525)
Image (generated by PyMOL):
PyMOL image
show in jmol