Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A227:A2400
Extra
PDB:
ATOM 1 O3' A A 226 -94.688 -56.855 87.079 1.00 0.01 O
ATOM 2 P C A 227 -96.146 -57.190 87.603 1.00 12.33 P
ATOM 3 OP1 C A 227 -96.314 -58.683 87.503 1.00 12.33 O
ATOM 4 OP2 C A 227 -97.095 -56.285 86.858 1.00 12.33 O
ATOM 5 O5' C A 227 -96.060 -56.736 89.138 1.00 12.33 O
ATOM 6 C5' C A 227 -94.938 -57.090 89.948 1.00 12.33 C
ATOM 7 C4' C A 227 -94.856 -56.259 91.210 1.00 12.33 C
ATOM 8 O4' C A 227 -94.271 -54.974 90.890 1.00 12.33 O
ATOM 9 C3' C A 227 -96.198 -55.955 91.898 1.00 12.33 C
ATOM 10 O3' C A 227 -96.041 -55.957 93.316 1.00 12.33 O
ATOM 11 C2' C A 227 -96.489 -54.540 91.446 1.00 12.33 C
ATOM 12 O2' C A 227 -97.336 -53.824 92.308 1.00 12.33 O
ATOM 13 C1' C A 227 -95.090 -53.955 91.419 1.00 12.33 C
ATOM 14 N1 C A 227 -94.956 -52.765 90.582 1.00 12.61 N
ATOM 15 C2 C A 227 -94.356 -51.631 91.129 1.00 12.61 C
ATOM 16 O2 C A 227 -93.964 -51.693 92.296 1.00 12.61 O
ATOM 17 N3 C A 227 -94.213 -50.507 90.386 1.00 12.61 N
ATOM 18 C4 C A 227 -94.670 -50.521 89.128 1.00 12.61 C
ATOM 19 N4 C A 227 -94.531 -49.419 88.388 1.00 12.61 N
ATOM 20 C5 C A 227 -95.299 -51.672 88.555 1.00 12.61 C
ATOM 21 C6 C A 227 -95.419 -52.768 89.310 1.00 12.61 C
ATOM 22 P C A 228 -96.181 -57.320 94.146 1.00 11.27 P
ATOM 23 OP1 C A 228 -97.576 -57.784 94.006 1.00 11.27 O
ATOM 24 OP2 C A 228 -95.641 -57.061 95.501 1.00 11.27 O
ATOM 25 O5' C A 228 -95.221 -58.295 93.368 1.00 11.27 O
TER
ATOM 1 O3' A B2399 -94.746 -50.982 78.368 1.00 23.08 O
ATOM 2 P A B2400 -94.184 -49.914 79.436 1.00 0.01 P
ATOM 3 OP1 A B2400 -94.843 -48.651 79.146 1.00 0.01 O
ATOM 4 OP2 A B2400 -92.707 -49.987 79.397 1.00 0.01 O
ATOM 5 O5' A B2400 -94.694 -50.492 80.809 1.00 0.01 O
ATOM 6 C5' A B2400 -94.578 -51.876 81.076 1.00 0.01 C
ATOM 7 C4' A B2400 -94.851 -52.164 82.513 1.00 0.01 C
ATOM 8 O4' A B2400 -93.850 -51.504 83.316 1.00 0.01 O
ATOM 9 C3' A B2400 -96.186 -51.655 83.015 1.00 0.01 C
ATOM 10 O3' A B2400 -97.181 -52.648 82.937 1.00 0.01 O
ATOM 11 C2' A B2400 -95.901 -51.222 84.427 1.00 0.01 C
ATOM 12 O2' A B2400 -95.974 -52.333 85.288 1.00 0.01 O
ATOM 13 C1' A B2400 -94.448 -50.786 84.346 1.00 0.01 C
ATOM 14 N9 A B2400 -94.258 -49.343 84.065 1.00 0.01 N
ATOM 15 C8 A B2400 -93.559 -48.918 82.971 1.00 0.01 C
ATOM 16 N7 A B2400 -93.395 -47.629 82.904 1.00 0.01 N
ATOM 17 C5 A B2400 -94.001 -47.154 84.041 1.00 0.01 C
ATOM 18 C6 A B2400 -94.156 -45.858 84.505 1.00 0.01 C
ATOM 19 N6 A B2400 -93.701 -44.777 83.886 1.00 0.01 N
ATOM 20 N1 A B2400 -94.803 -45.694 85.648 1.00 0.01 N
ATOM 21 C2 A B2400 -95.255 -46.775 86.269 1.00 0.01 C
ATOM 22 N3 A B2400 -95.167 -48.045 85.928 1.00 0.01 N
ATOM 23 C4 A B2400 -94.517 -48.186 84.779 1.00 0.01 C
ATOM 24 P U B2401 -98.502 -52.407 82.065 1.00 0.01 P
ATOM 25 OP1 U B2401 -99.127 -53.730 81.846 1.00 0.01 O
ATOM 26 OP2 U B2401 -98.110 -51.586 80.886 1.00 0.01 O
ATOM 27 O5' U B2401 -99.411 -51.544 83.023 1.00 0.01 O
TER
ATOM 2 P C A 227 -96.146 -57.190 87.603 1.00 12.33 P
ATOM 3 OP1 C A 227 -96.314 -58.683 87.503 1.00 12.33 O
ATOM 4 OP2 C A 227 -97.095 -56.285 86.858 1.00 12.33 O
ATOM 5 O5' C A 227 -96.060 -56.736 89.138 1.00 12.33 O
ATOM 6 C5' C A 227 -94.938 -57.090 89.948 1.00 12.33 C
ATOM 7 C4' C A 227 -94.856 -56.259 91.210 1.00 12.33 C
ATOM 8 O4' C A 227 -94.271 -54.974 90.890 1.00 12.33 O
ATOM 9 C3' C A 227 -96.198 -55.955 91.898 1.00 12.33 C
ATOM 10 O3' C A 227 -96.041 -55.957 93.316 1.00 12.33 O
ATOM 11 C2' C A 227 -96.489 -54.540 91.446 1.00 12.33 C
ATOM 12 O2' C A 227 -97.336 -53.824 92.308 1.00 12.33 O
ATOM 13 C1' C A 227 -95.090 -53.955 91.419 1.00 12.33 C
ATOM 14 N1 C A 227 -94.956 -52.765 90.582 1.00 12.61 N
ATOM 15 C2 C A 227 -94.356 -51.631 91.129 1.00 12.61 C
ATOM 16 O2 C A 227 -93.964 -51.693 92.296 1.00 12.61 O
ATOM 17 N3 C A 227 -94.213 -50.507 90.386 1.00 12.61 N
ATOM 18 C4 C A 227 -94.670 -50.521 89.128 1.00 12.61 C
ATOM 19 N4 C A 227 -94.531 -49.419 88.388 1.00 12.61 N
ATOM 20 C5 C A 227 -95.299 -51.672 88.555 1.00 12.61 C
ATOM 21 C6 C A 227 -95.419 -52.768 89.310 1.00 12.61 C
ATOM 22 P C A 228 -96.181 -57.320 94.146 1.00 11.27 P
ATOM 23 OP1 C A 228 -97.576 -57.784 94.006 1.00 11.27 O
ATOM 24 OP2 C A 228 -95.641 -57.061 95.501 1.00 11.27 O
ATOM 25 O5' C A 228 -95.221 -58.295 93.368 1.00 11.27 O
TER
ATOM 1 O3' A B2399 -94.746 -50.982 78.368 1.00 23.08 O
ATOM 2 P A B2400 -94.184 -49.914 79.436 1.00 0.01 P
ATOM 3 OP1 A B2400 -94.843 -48.651 79.146 1.00 0.01 O
ATOM 4 OP2 A B2400 -92.707 -49.987 79.397 1.00 0.01 O
ATOM 5 O5' A B2400 -94.694 -50.492 80.809 1.00 0.01 O
ATOM 6 C5' A B2400 -94.578 -51.876 81.076 1.00 0.01 C
ATOM 7 C4' A B2400 -94.851 -52.164 82.513 1.00 0.01 C
ATOM 8 O4' A B2400 -93.850 -51.504 83.316 1.00 0.01 O
ATOM 9 C3' A B2400 -96.186 -51.655 83.015 1.00 0.01 C
ATOM 10 O3' A B2400 -97.181 -52.648 82.937 1.00 0.01 O
ATOM 11 C2' A B2400 -95.901 -51.222 84.427 1.00 0.01 C
ATOM 12 O2' A B2400 -95.974 -52.333 85.288 1.00 0.01 O
ATOM 13 C1' A B2400 -94.448 -50.786 84.346 1.00 0.01 C
ATOM 14 N9 A B2400 -94.258 -49.343 84.065 1.00 0.01 N
ATOM 15 C8 A B2400 -93.559 -48.918 82.971 1.00 0.01 C
ATOM 16 N7 A B2400 -93.395 -47.629 82.904 1.00 0.01 N
ATOM 17 C5 A B2400 -94.001 -47.154 84.041 1.00 0.01 C
ATOM 18 C6 A B2400 -94.156 -45.858 84.505 1.00 0.01 C
ATOM 19 N6 A B2400 -93.701 -44.777 83.886 1.00 0.01 N
ATOM 20 N1 A B2400 -94.803 -45.694 85.648 1.00 0.01 N
ATOM 21 C2 A B2400 -95.255 -46.775 86.269 1.00 0.01 C
ATOM 22 N3 A B2400 -95.167 -48.045 85.928 1.00 0.01 N
ATOM 23 C4 A B2400 -94.517 -48.186 84.779 1.00 0.01 C
ATOM 24 P U B2401 -98.502 -52.407 82.065 1.00 0.01 P
ATOM 25 OP1 U B2401 -99.127 -53.730 81.846 1.00 0.01 O
ATOM 26 OP2 U B2401 -98.110 -51.586 80.886 1.00 0.01 O
ATOM 27 O5' U B2401 -99.411 -51.544 83.023 1.00 0.01 O
TER
Atoms:
C2: (-94.356,-51.631,91.129)
OP1: (-96.314,-58.683,87.503)
OP2: (-97.095,-56.285,86.858)
C4: (-94.670,-50.521,89.128)
O5': (-96.060,-56.736,89.138)
C3': (-96.198,-55.955,91.898)
C1': (-95.090,-53.955,91.419)
O4': (-94.271,-54.974,90.890)
C5': (-94.938,-57.090,89.948)
P: (-96.146,-57.190,87.603)
O2: (-93.964,-51.693,92.296)
C4': (-94.856,-56.259,91.210)
C2': (-96.489,-54.540,91.446)
O2': (-97.336,-53.824,92.308)
N1: (-94.956,-52.765,90.582)
N3: (-94.213,-50.507,90.386)
N4: (-94.531,-49.419,88.388)
C6: (-95.419,-52.768,89.310)
C5: (-95.299,-51.672,88.555)
O3': (-96.041,-55.957,93.316)
OP1: (-96.314,-58.683,87.503)
OP2: (-97.095,-56.285,86.858)
C4: (-94.670,-50.521,89.128)
O5': (-96.060,-56.736,89.138)
C3': (-96.198,-55.955,91.898)
C1': (-95.090,-53.955,91.419)
O4': (-94.271,-54.974,90.890)
C5': (-94.938,-57.090,89.948)
P: (-96.146,-57.190,87.603)
O2: (-93.964,-51.693,92.296)
C4': (-94.856,-56.259,91.210)
C2': (-96.489,-54.540,91.446)
O2': (-97.336,-53.824,92.308)
N1: (-94.956,-52.765,90.582)
N3: (-94.213,-50.507,90.386)
N4: (-94.531,-49.419,88.388)
C6: (-95.419,-52.768,89.310)
C5: (-95.299,-51.672,88.555)
O3': (-96.041,-55.957,93.316)
OP1: (-94.843,-48.651,79.146)
OP2: (-92.707,-49.987,79.397)
C3': (-96.186,-51.655,83.015)
C1': (-94.448,-50.786,84.346)
C5': (-94.578,-51.876,81.076)
O4': (-93.850,-51.504,83.316)
C8: (-93.559,-48.918,82.971)
O2': (-95.974,-52.333,85.288)
C6: (-94.156,-45.858,84.505)
C5: (-94.001,-47.154,84.041)
C4: (-94.517,-48.186,84.779)
P: (-94.184,-49.914,79.436)
C4': (-94.851,-52.164,82.513)
C2': (-95.901,-51.222,84.427)
C2: (-95.255,-46.775,86.269)
N1: (-94.803,-45.694,85.648)
N3: (-95.167,-48.045,85.928)
N6: (-93.701,-44.777,83.886)
N7: (-93.395,-47.629,82.904)
N9: (-94.258,-49.343,84.065)
O5': (-94.694,-50.492,80.809)
O3': (-97.181,-52.648,82.937)
OP2: (-92.707,-49.987,79.397)
C3': (-96.186,-51.655,83.015)
C1': (-94.448,-50.786,84.346)
C5': (-94.578,-51.876,81.076)
O4': (-93.850,-51.504,83.316)
C8: (-93.559,-48.918,82.971)
O2': (-95.974,-52.333,85.288)
C6: (-94.156,-45.858,84.505)
C5: (-94.001,-47.154,84.041)
C4: (-94.517,-48.186,84.779)
P: (-94.184,-49.914,79.436)
C4': (-94.851,-52.164,82.513)
C2': (-95.901,-51.222,84.427)
C2: (-95.255,-46.775,86.269)
N1: (-94.803,-45.694,85.648)
N3: (-95.167,-48.045,85.928)
N6: (-93.701,-44.777,83.886)
N7: (-93.395,-47.629,82.904)
N9: (-94.258,-49.343,84.065)
O5': (-94.694,-50.492,80.809)
O3': (-97.181,-52.648,82.937)
Image (generated by PyMOL):