Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A2872:A2871
Extra
PDB:
ATOM 1 O3' A A2871 -0.728 75.816 208.582 1.00 12.88 O
ATOM 2 P C A2872 0.707 75.188 208.267 1.00 11.79 P
ATOM 3 OP1 C A2872 0.491 73.954 207.489 1.00 11.79 O
ATOM 4 OP2 C A2872 1.453 75.101 209.551 1.00 11.79 O
ATOM 5 O5' C A2872 1.349 76.306 207.342 1.00 11.79 O
ATOM 6 C5' C A2872 2.735 76.589 207.373 1.00 11.79 C
ATOM 7 C4' C A2872 3.093 77.501 206.244 1.00 11.79 C
ATOM 8 O4' C A2872 2.687 76.888 204.997 1.00 11.79 O
ATOM 9 C3' C A2872 2.368 78.835 206.242 1.00 11.79 C
ATOM 10 O3' C A2872 2.959 79.785 207.093 1.00 11.79 O
ATOM 11 C2' C A2872 2.399 79.226 204.787 1.00 11.79 C
ATOM 12 O2' C A2872 3.689 79.699 204.423 1.00 11.79 O
ATOM 13 C1' C A2872 2.174 77.872 204.126 1.00 11.79 C
ATOM 14 N1 C A2872 0.730 77.594 203.875 1.00 11.63 N
ATOM 15 C2 C A2872 0.088 78.376 202.908 1.00 11.63 C
ATOM 16 O2 C A2872 0.744 79.266 202.322 1.00 11.63 O
ATOM 17 N3 C A2872 -1.219 78.152 202.637 1.00 11.63 N
ATOM 18 C4 C A2872 -1.877 77.186 203.262 1.00 11.63 C
ATOM 19 N4 C A2872 -3.157 77.006 202.936 1.00 11.63 N
ATOM 20 C5 C A2872 -1.246 76.376 204.247 1.00 11.63 C
ATOM 21 C6 C A2872 0.045 76.605 204.516 1.00 11.63 C
ATOM 22 P U A2873 2.112 81.054 207.574 1.00 7.39 P
ATOM 23 OP1 U A2873 3.033 81.903 208.397 1.00 7.39 O
ATOM 24 OP2 U A2873 0.851 80.543 208.189 1.00 7.39 O
ATOM 25 O5' U A2873 1.780 81.769 206.206 1.00 7.39 O
TER
ATOM 1 O3' U B2870 -3.179 69.945 205.530 1.00 21.10 O
ATOM 2 P A B2871 -3.851 70.691 206.784 1.00 12.88 P
ATOM 3 OP1 A B2871 -3.356 70.008 208.011 1.00 12.88 O
ATOM 4 OP2 A B2871 -5.337 70.738 206.537 1.00 12.88 O
ATOM 5 O5' A B2871 -3.220 72.150 206.698 1.00 12.88 O
ATOM 6 C5' A B2871 -2.611 72.738 207.838 1.00 12.88 C
ATOM 7 C4' A B2871 -2.090 74.115 207.542 1.00 12.88 C
ATOM 8 O4' A B2871 -3.049 74.828 206.719 1.00 12.88 O
ATOM 9 C3' A B2871 -1.858 74.986 208.772 1.00 12.88 C
ATOM 10 O3' A B2871 -0.728 75.816 208.582 1.00 12.88 O
ATOM 11 C2' A B2871 -3.093 75.862 208.806 1.00 12.88 C
ATOM 12 O2' A B2871 -2.908 77.087 209.476 1.00 12.88 O
ATOM 13 C1' A B2871 -3.344 76.069 207.324 1.00 12.88 C
ATOM 14 N9 A B2871 -4.722 76.438 207.001 1.00 12.68 N
ATOM 15 C8 A B2871 -5.141 77.454 206.180 1.00 12.68 C
ATOM 16 N7 A B2871 -6.446 77.552 206.088 1.00 12.68 N
ATOM 17 C5 A B2871 -6.917 76.534 206.903 1.00 12.68 C
ATOM 18 C6 A B2871 -8.210 76.110 207.236 1.00 12.68 C
ATOM 19 N6 A B2871 -9.343 76.646 206.780 1.00 12.68 N
ATOM 20 N1 A B2871 -8.316 75.072 208.074 1.00 12.68 N
ATOM 21 C2 A B2871 -7.197 74.514 208.543 1.00 12.68 C
ATOM 22 N3 A B2871 -5.933 74.821 208.316 1.00 12.68 N
ATOM 23 C4 A B2871 -5.865 75.848 207.476 1.00 12.68 C
ATOM 24 P C B2872 0.707 75.188 208.267 1.00 11.79 P
ATOM 25 OP1 C B2872 0.491 73.954 207.489 1.00 11.79 O
ATOM 26 OP2 C B2872 1.453 75.101 209.551 1.00 11.79 O
ATOM 27 O5' C B2872 1.349 76.306 207.342 1.00 11.79 O
TER
ATOM 2 P C A2872 0.707 75.188 208.267 1.00 11.79 P
ATOM 3 OP1 C A2872 0.491 73.954 207.489 1.00 11.79 O
ATOM 4 OP2 C A2872 1.453 75.101 209.551 1.00 11.79 O
ATOM 5 O5' C A2872 1.349 76.306 207.342 1.00 11.79 O
ATOM 6 C5' C A2872 2.735 76.589 207.373 1.00 11.79 C
ATOM 7 C4' C A2872 3.093 77.501 206.244 1.00 11.79 C
ATOM 8 O4' C A2872 2.687 76.888 204.997 1.00 11.79 O
ATOM 9 C3' C A2872 2.368 78.835 206.242 1.00 11.79 C
ATOM 10 O3' C A2872 2.959 79.785 207.093 1.00 11.79 O
ATOM 11 C2' C A2872 2.399 79.226 204.787 1.00 11.79 C
ATOM 12 O2' C A2872 3.689 79.699 204.423 1.00 11.79 O
ATOM 13 C1' C A2872 2.174 77.872 204.126 1.00 11.79 C
ATOM 14 N1 C A2872 0.730 77.594 203.875 1.00 11.63 N
ATOM 15 C2 C A2872 0.088 78.376 202.908 1.00 11.63 C
ATOM 16 O2 C A2872 0.744 79.266 202.322 1.00 11.63 O
ATOM 17 N3 C A2872 -1.219 78.152 202.637 1.00 11.63 N
ATOM 18 C4 C A2872 -1.877 77.186 203.262 1.00 11.63 C
ATOM 19 N4 C A2872 -3.157 77.006 202.936 1.00 11.63 N
ATOM 20 C5 C A2872 -1.246 76.376 204.247 1.00 11.63 C
ATOM 21 C6 C A2872 0.045 76.605 204.516 1.00 11.63 C
ATOM 22 P U A2873 2.112 81.054 207.574 1.00 7.39 P
ATOM 23 OP1 U A2873 3.033 81.903 208.397 1.00 7.39 O
ATOM 24 OP2 U A2873 0.851 80.543 208.189 1.00 7.39 O
ATOM 25 O5' U A2873 1.780 81.769 206.206 1.00 7.39 O
TER
ATOM 1 O3' U B2870 -3.179 69.945 205.530 1.00 21.10 O
ATOM 2 P A B2871 -3.851 70.691 206.784 1.00 12.88 P
ATOM 3 OP1 A B2871 -3.356 70.008 208.011 1.00 12.88 O
ATOM 4 OP2 A B2871 -5.337 70.738 206.537 1.00 12.88 O
ATOM 5 O5' A B2871 -3.220 72.150 206.698 1.00 12.88 O
ATOM 6 C5' A B2871 -2.611 72.738 207.838 1.00 12.88 C
ATOM 7 C4' A B2871 -2.090 74.115 207.542 1.00 12.88 C
ATOM 8 O4' A B2871 -3.049 74.828 206.719 1.00 12.88 O
ATOM 9 C3' A B2871 -1.858 74.986 208.772 1.00 12.88 C
ATOM 10 O3' A B2871 -0.728 75.816 208.582 1.00 12.88 O
ATOM 11 C2' A B2871 -3.093 75.862 208.806 1.00 12.88 C
ATOM 12 O2' A B2871 -2.908 77.087 209.476 1.00 12.88 O
ATOM 13 C1' A B2871 -3.344 76.069 207.324 1.00 12.88 C
ATOM 14 N9 A B2871 -4.722 76.438 207.001 1.00 12.68 N
ATOM 15 C8 A B2871 -5.141 77.454 206.180 1.00 12.68 C
ATOM 16 N7 A B2871 -6.446 77.552 206.088 1.00 12.68 N
ATOM 17 C5 A B2871 -6.917 76.534 206.903 1.00 12.68 C
ATOM 18 C6 A B2871 -8.210 76.110 207.236 1.00 12.68 C
ATOM 19 N6 A B2871 -9.343 76.646 206.780 1.00 12.68 N
ATOM 20 N1 A B2871 -8.316 75.072 208.074 1.00 12.68 N
ATOM 21 C2 A B2871 -7.197 74.514 208.543 1.00 12.68 C
ATOM 22 N3 A B2871 -5.933 74.821 208.316 1.00 12.68 N
ATOM 23 C4 A B2871 -5.865 75.848 207.476 1.00 12.68 C
ATOM 24 P C B2872 0.707 75.188 208.267 1.00 11.79 P
ATOM 25 OP1 C B2872 0.491 73.954 207.489 1.00 11.79 O
ATOM 26 OP2 C B2872 1.453 75.101 209.551 1.00 11.79 O
ATOM 27 O5' C B2872 1.349 76.306 207.342 1.00 11.79 O
TER
Atoms:
C2: (0.088,78.376,202.908)
OP1: (0.491,73.954,207.489)
OP2: (1.453,75.101,209.551)
C4: (-1.877,77.186,203.262)
O5': (1.349,76.306,207.342)
C3': (2.368,78.835,206.242)
C1': (2.174,77.872,204.126)
O4': (2.687,76.888,204.997)
C5': (2.735,76.589,207.373)
P: (0.707,75.188,208.267)
O2: (0.744,79.266,202.322)
C4': (3.093,77.501,206.244)
C2': (2.399,79.226,204.787)
O2': (3.689,79.699,204.423)
N1: (0.730,77.594,203.875)
N3: (-1.219,78.152,202.637)
N4: (-3.157,77.006,202.936)
C6: (0.045,76.605,204.516)
C5: (-1.246,76.376,204.247)
O3': (2.959,79.785,207.093)
OP1: (0.491,73.954,207.489)
OP2: (1.453,75.101,209.551)
C4: (-1.877,77.186,203.262)
O5': (1.349,76.306,207.342)
C3': (2.368,78.835,206.242)
C1': (2.174,77.872,204.126)
O4': (2.687,76.888,204.997)
C5': (2.735,76.589,207.373)
P: (0.707,75.188,208.267)
O2: (0.744,79.266,202.322)
C4': (3.093,77.501,206.244)
C2': (2.399,79.226,204.787)
O2': (3.689,79.699,204.423)
N1: (0.730,77.594,203.875)
N3: (-1.219,78.152,202.637)
N4: (-3.157,77.006,202.936)
C6: (0.045,76.605,204.516)
C5: (-1.246,76.376,204.247)
O3': (2.959,79.785,207.093)
OP1: (-3.356,70.008,208.011)
OP2: (-5.337,70.738,206.537)
C3': (-1.858,74.986,208.772)
C1': (-3.344,76.069,207.324)
C5': (-2.611,72.738,207.838)
O4': (-3.049,74.828,206.719)
C8: (-5.141,77.454,206.180)
O2': (-2.908,77.087,209.476)
C6: (-8.210,76.110,207.236)
C5: (-6.917,76.534,206.903)
C4: (-5.865,75.848,207.476)
P: (-3.851,70.691,206.784)
C4': (-2.090,74.115,207.542)
C2': (-3.093,75.862,208.806)
C2: (-7.197,74.514,208.543)
N1: (-8.316,75.072,208.074)
N3: (-5.933,74.821,208.316)
N6: (-9.343,76.646,206.780)
N7: (-6.446,77.552,206.088)
N9: (-4.722,76.438,207.001)
O5': (-3.220,72.150,206.698)
O3': (-0.728,75.816,208.582)
OP2: (-5.337,70.738,206.537)
C3': (-1.858,74.986,208.772)
C1': (-3.344,76.069,207.324)
C5': (-2.611,72.738,207.838)
O4': (-3.049,74.828,206.719)
C8: (-5.141,77.454,206.180)
O2': (-2.908,77.087,209.476)
C6: (-8.210,76.110,207.236)
C5: (-6.917,76.534,206.903)
C4: (-5.865,75.848,207.476)
P: (-3.851,70.691,206.784)
C4': (-2.090,74.115,207.542)
C2': (-3.093,75.862,208.806)
C2: (-7.197,74.514,208.543)
N1: (-8.316,75.072,208.074)
N3: (-5.933,74.821,208.316)
N6: (-9.343,76.646,206.780)
N7: (-6.446,77.552,206.088)
N9: (-4.722,76.438,207.001)
O5': (-3.220,72.150,206.698)
O3': (-0.728,75.816,208.582)
Image (generated by PyMOL):