ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5D:1661:1695

Extra

PDB:
ATOM 1 O3' A A 660 69.578 -75.109 71.571 1.00 58.63 O
ATOM 2 P C A 661 68.078 -75.399 71.049 1.00 54.21 P
ATOM 3 OP1 C A 661 67.730 -74.302 70.081 1.00 53.67 O
ATOM 4 OP2 C A 661 67.226 -75.607 72.248 1.00 54.22 O
ATOM 5 O5' C A 661 68.254 -76.777 70.284 1.00 54.80 O
ATOM 6 C5' C A 661 68.801 -77.902 70.953 1.00 55.40 C
ATOM 7 C4' C A 661 69.242 -78.963 69.984 1.00 55.91 C
ATOM 8 O4' C A 661 68.179 -79.235 69.044 1.00 55.85 O
ATOM 9 C3' C A 661 70.442 -78.616 69.112 1.00 55.92 C
ATOM 10 O3' C A 661 71.666 -78.866 69.779 1.00 56.23 O
ATOM 11 C2' C A 661 70.242 -79.511 67.900 1.00 56.27 C
ATOM 12 O2' C A 661 70.711 -80.811 68.191 1.00 56.94 O
ATOM 13 C1' C A 661 68.717 -79.570 67.788 1.00 56.07 C
ATOM 14 N1 C A 661 68.150 -78.640 66.762 1.00 55.56 N
ATOM 15 C2 C A 661 68.256 -78.909 65.373 1.00 55.70 C
ATOM 16 O2 C A 661 68.913 -79.925 65.023 1.00 56.25 O
ATOM 17 N3 C A 661 67.685 -78.052 64.454 1.00 55.24 N
ATOM 18 C4 C A 661 66.998 -76.981 64.888 1.00 54.67 C
ATOM 19 N4 C A 661 66.429 -76.129 64.001 1.00 54.23 N
ATOM 20 C5 C A 661 66.860 -76.722 66.298 1.00 54.53 C
ATOM 21 C6 C A 661 67.421 -77.555 67.186 1.00 54.98 C
ATOM 22 P G A 662 72.791 -77.747 69.875 1.00 71.65 P
ATOM 23 OP1 G A 662 73.802 -78.233 70.826 1.00 72.06 O
ATOM 24 OP2 G A 662 72.133 -76.468 70.148 1.00 70.99 O
ATOM 25 O5' G A 662 73.365 -77.754 68.419 1.00 71.72 O
TER

ATOM 1 O3' G B 694 60.874 -73.711 62.994 1.00 54.55 O
ATOM 2 P A B 695 60.394 -73.709 64.496 1.00 55.61 P
ATOM 3 OP1 A B 695 59.611 -74.986 64.717 1.00 56.07 O
ATOM 4 OP2 A B 695 59.741 -72.393 64.724 1.00 55.00 O
ATOM 5 O5' A B 695 61.766 -73.770 65.296 1.00 55.78 O
ATOM 6 C5' A B 695 62.444 -74.990 65.515 1.00 56.36 C
ATOM 7 C4' A B 695 63.659 -74.750 66.347 1.00 56.40 C
ATOM 8 O4' A B 695 64.448 -73.708 65.730 1.00 56.06 O
ATOM 9 C3' A B 695 63.398 -74.216 67.745 1.00 56.15 C
ATOM 10 O3' A B 695 63.049 -75.230 68.670 1.00 56.54 O
ATOM 11 C2' A B 695 64.699 -73.513 68.073 1.00 56.02 C
ATOM 12 O2' A B 695 65.705 -74.458 68.367 1.00 56.55 O
ATOM 13 C1' A B 695 65.039 -72.891 66.729 1.00 55.80 C
ATOM 14 N9 A B 695 64.530 -71.504 66.611 1.00 55.17 N
ATOM 15 C8 A B 695 63.609 -71.000 65.734 1.00 54.86 C
ATOM 16 N7 A B 695 63.355 -69.725 65.903 1.00 54.32 N
ATOM 17 C5 A B 695 64.150 -69.363 66.971 1.00 54.28 C
ATOM 18 C6 A B 695 64.333 -68.166 67.646 1.00 53.85 C
ATOM 19 N6 A B 695 63.717 -67.034 67.333 1.00 53.34 N
ATOM 20 N1 A B 695 65.211 -68.148 68.676 1.00 53.96 N
ATOM 21 C2 A B 695 65.862 -69.244 69.018 1.00 54.47 C
ATOM 22 N3 A B 695 65.756 -70.423 68.442 1.00 54.91 N
ATOM 23 C4 A B 695 64.881 -70.434 67.419 1.00 54.79 C
ATOM 24 P C B 696 62.090 -74.902 69.918 1.00 53.36 P
ATOM 25 OP1 C B 696 61.851 -76.166 70.619 1.00 53.89 O
ATOM 26 OP2 C B 696 60.922 -74.149 69.388 1.00 52.91 O
ATOM 27 O5' C B 696 62.994 -73.930 70.816 1.00 53.08 O
TER

Atoms:
C2: (68.256,-78.909,65.373)
OP1: (67.730,-74.302,70.081)
OP2: (67.226,-75.607,72.248)
C4: (66.998,-76.981,64.888)
O5': (68.254,-76.777,70.284)
C3': (70.442,-78.616,69.112)
C1': (68.717,-79.570,67.788)
O4': (68.179,-79.235,69.044)
C5': (68.801,-77.902,70.953)
P: (68.078,-75.399,71.049)
O2: (68.913,-79.925,65.023)
C4': (69.242,-78.963,69.984)
C2': (70.242,-79.511,67.900)
O2': (70.711,-80.811,68.191)
N1: (68.150,-78.640,66.762)
N3: (67.685,-78.052,64.454)
N4: (66.429,-76.129,64.001)
C6: (67.421,-77.555,67.186)
C5: (66.860,-76.722,66.298)
O3': (71.666,-78.866,69.779)
OP1: (59.611,-74.986,64.717)
OP2: (59.741,-72.393,64.724)
C3': (63.398,-74.216,67.745)
C1': (65.039,-72.891,66.729)
C5': (62.444,-74.990,65.515)
O4': (64.448,-73.708,65.730)
C8: (63.609,-71.000,65.734)
O2': (65.705,-74.458,68.367)
C6: (64.333,-68.166,67.646)
C5: (64.150,-69.363,66.971)
C4: (64.881,-70.434,67.419)
P: (60.394,-73.709,64.496)
C4': (63.659,-74.750,66.347)
C2': (64.699,-73.513,68.073)
C2: (65.862,-69.244,69.018)
N1: (65.211,-68.148,68.676)
N3: (65.756,-70.423,68.442)
N6: (63.717,-67.034,67.333)
N7: (63.355,-69.725,65.903)
N9: (64.530,-71.504,66.611)
O5': (61.766,-73.770,65.296)
O3': (63.049,-75.230,68.670)
Image (generated by PyMOL):
PyMOL image
show in jmol