Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
5MSF:S8:S6
Extra
PDB:
ATOM 1 O3' U A 7 -92.511 35.011 43.284 0.50 37.76 O
ATOM 2 P C A 8 -92.070 36.053 44.424 0.50 46.81 P
ATOM 3 OP1 C A 8 -91.492 35.245 45.527 0.50 42.56 O
ATOM 4 OP2 C A 8 -93.246 36.920 44.691 0.50 36.51 O
ATOM 5 O5' C A 8 -90.907 36.939 43.783 0.50 37.57 O
ATOM 6 C5' C A 8 -89.634 37.009 44.418 0.50 32.00 C
ATOM 7 C4' C A 8 -89.005 38.379 44.248 0.50 36.53 C
ATOM 8 O4' C A 8 -89.106 38.805 42.864 0.50 39.84 O
ATOM 9 C3' C A 8 -89.739 39.439 45.069 0.50 34.62 C
ATOM 10 O3' C A 8 -88.850 40.317 45.765 0.50 47.84 O
ATOM 11 C2' C A 8 -90.675 40.151 44.092 0.50 35.49 C
ATOM 12 O2' C A 8 -90.697 41.547 44.303 0.50 46.40 O
ATOM 13 C1' C A 8 -89.947 39.928 42.770 0.50 31.18 C
ATOM 14 N1 C A 8 -90.667 39.925 41.490 0.50 28.82 N
ATOM 15 C2 C A 8 -90.916 41.161 40.864 0.50 25.01 C
ATOM 16 O2 C A 8 -90.542 42.205 41.423 0.50 23.37 O
ATOM 17 N3 C A 8 -91.553 41.182 39.674 0.50 20.59 N
ATOM 18 C4 C A 8 -91.938 40.036 39.106 0.50 27.45 C
ATOM 19 N4 C A 8 -92.561 40.102 37.929 0.50 29.94 N
ATOM 20 C5 C A 8 -91.700 38.771 39.720 0.50 30.89 C
ATOM 21 C6 C A 8 -91.070 38.760 40.902 0.50 27.82 C
ATOM 22 P A A 9 -88.277 39.924 47.210 0.50 44.33 P
ATOM 23 OP1 A A 9 -87.987 38.467 47.233 0.50 45.39 O
ATOM 24 OP2 A A 9 -89.204 40.504 48.212 0.50 43.64 O
ATOM 25 O5' A A 9 -86.899 40.725 47.299 0.50 35.39 O
TER
ATOM 1 O3' G B 5 -90.187 38.983 32.070 0.50 43.86 O
ATOM 2 P A B 6 -91.376 39.398 33.073 0.50 44.32 P
ATOM 3 OP1 A B 6 -92.681 38.955 32.520 0.50 33.42 O
ATOM 4 OP2 A B 6 -91.165 40.839 33.386 0.50 32.42 O
ATOM 5 O5' A B 6 -91.087 38.559 34.398 0.50 38.74 O
ATOM 6 C5' A B 6 -90.830 37.160 34.340 0.50 27.43 C
ATOM 7 C4' A B 6 -90.099 36.719 35.585 0.50 32.09 C
ATOM 8 O4' A B 6 -88.881 37.498 35.708 0.50 22.69 O
ATOM 9 C3' A B 6 -90.826 36.963 36.895 0.50 36.09 C
ATOM 10 O3' A B 6 -91.718 35.904 37.197 0.50 34.13 O
ATOM 11 C2' A B 6 -89.680 37.033 37.892 0.50 37.95 C
ATOM 12 O2' A B 6 -89.194 35.757 38.259 0.50 42.02 O
ATOM 13 C1' A B 6 -88.629 37.781 37.075 0.50 31.10 C
ATOM 14 N9 A B 6 -88.725 39.228 37.253 0.50 38.02 N
ATOM 15 C8 A B 6 -89.168 40.157 36.343 0.50 49.35 C
ATOM 16 N7 A B 6 -89.132 41.391 36.786 0.50 58.19 N
ATOM 17 C5 A B 6 -88.632 41.268 38.075 0.50 53.60 C
ATOM 18 C6 A B 6 -88.350 42.216 39.079 0.50 51.99 C
ATOM 19 N6 A B 6 -88.540 43.532 38.930 0.50 62.10 N
ATOM 20 N1 A B 6 -87.859 41.761 40.254 0.50 43.49 N
ATOM 21 C2 A B 6 -87.671 40.440 40.403 0.50 29.12 C
ATOM 22 N3 A B 6 -87.898 39.451 39.537 0.50 28.67 N
ATOM 23 C4 A B 6 -88.381 39.938 38.379 0.50 44.79 C
ATOM 24 P U B 7 -93.290 36.202 37.271 0.50 45.32 P
ATOM 25 OP1 U B 7 -93.951 35.394 36.213 0.50 39.81 O
ATOM 26 OP2 U B 7 -93.462 37.678 37.293 0.50 25.97 O
ATOM 27 O5' U B 7 -93.722 35.646 38.696 0.50 36.16 O
TER
ATOM 2 P C A 8 -92.070 36.053 44.424 0.50 46.81 P
ATOM 3 OP1 C A 8 -91.492 35.245 45.527 0.50 42.56 O
ATOM 4 OP2 C A 8 -93.246 36.920 44.691 0.50 36.51 O
ATOM 5 O5' C A 8 -90.907 36.939 43.783 0.50 37.57 O
ATOM 6 C5' C A 8 -89.634 37.009 44.418 0.50 32.00 C
ATOM 7 C4' C A 8 -89.005 38.379 44.248 0.50 36.53 C
ATOM 8 O4' C A 8 -89.106 38.805 42.864 0.50 39.84 O
ATOM 9 C3' C A 8 -89.739 39.439 45.069 0.50 34.62 C
ATOM 10 O3' C A 8 -88.850 40.317 45.765 0.50 47.84 O
ATOM 11 C2' C A 8 -90.675 40.151 44.092 0.50 35.49 C
ATOM 12 O2' C A 8 -90.697 41.547 44.303 0.50 46.40 O
ATOM 13 C1' C A 8 -89.947 39.928 42.770 0.50 31.18 C
ATOM 14 N1 C A 8 -90.667 39.925 41.490 0.50 28.82 N
ATOM 15 C2 C A 8 -90.916 41.161 40.864 0.50 25.01 C
ATOM 16 O2 C A 8 -90.542 42.205 41.423 0.50 23.37 O
ATOM 17 N3 C A 8 -91.553 41.182 39.674 0.50 20.59 N
ATOM 18 C4 C A 8 -91.938 40.036 39.106 0.50 27.45 C
ATOM 19 N4 C A 8 -92.561 40.102 37.929 0.50 29.94 N
ATOM 20 C5 C A 8 -91.700 38.771 39.720 0.50 30.89 C
ATOM 21 C6 C A 8 -91.070 38.760 40.902 0.50 27.82 C
ATOM 22 P A A 9 -88.277 39.924 47.210 0.50 44.33 P
ATOM 23 OP1 A A 9 -87.987 38.467 47.233 0.50 45.39 O
ATOM 24 OP2 A A 9 -89.204 40.504 48.212 0.50 43.64 O
ATOM 25 O5' A A 9 -86.899 40.725 47.299 0.50 35.39 O
TER
ATOM 1 O3' G B 5 -90.187 38.983 32.070 0.50 43.86 O
ATOM 2 P A B 6 -91.376 39.398 33.073 0.50 44.32 P
ATOM 3 OP1 A B 6 -92.681 38.955 32.520 0.50 33.42 O
ATOM 4 OP2 A B 6 -91.165 40.839 33.386 0.50 32.42 O
ATOM 5 O5' A B 6 -91.087 38.559 34.398 0.50 38.74 O
ATOM 6 C5' A B 6 -90.830 37.160 34.340 0.50 27.43 C
ATOM 7 C4' A B 6 -90.099 36.719 35.585 0.50 32.09 C
ATOM 8 O4' A B 6 -88.881 37.498 35.708 0.50 22.69 O
ATOM 9 C3' A B 6 -90.826 36.963 36.895 0.50 36.09 C
ATOM 10 O3' A B 6 -91.718 35.904 37.197 0.50 34.13 O
ATOM 11 C2' A B 6 -89.680 37.033 37.892 0.50 37.95 C
ATOM 12 O2' A B 6 -89.194 35.757 38.259 0.50 42.02 O
ATOM 13 C1' A B 6 -88.629 37.781 37.075 0.50 31.10 C
ATOM 14 N9 A B 6 -88.725 39.228 37.253 0.50 38.02 N
ATOM 15 C8 A B 6 -89.168 40.157 36.343 0.50 49.35 C
ATOM 16 N7 A B 6 -89.132 41.391 36.786 0.50 58.19 N
ATOM 17 C5 A B 6 -88.632 41.268 38.075 0.50 53.60 C
ATOM 18 C6 A B 6 -88.350 42.216 39.079 0.50 51.99 C
ATOM 19 N6 A B 6 -88.540 43.532 38.930 0.50 62.10 N
ATOM 20 N1 A B 6 -87.859 41.761 40.254 0.50 43.49 N
ATOM 21 C2 A B 6 -87.671 40.440 40.403 0.50 29.12 C
ATOM 22 N3 A B 6 -87.898 39.451 39.537 0.50 28.67 N
ATOM 23 C4 A B 6 -88.381 39.938 38.379 0.50 44.79 C
ATOM 24 P U B 7 -93.290 36.202 37.271 0.50 45.32 P
ATOM 25 OP1 U B 7 -93.951 35.394 36.213 0.50 39.81 O
ATOM 26 OP2 U B 7 -93.462 37.678 37.293 0.50 25.97 O
ATOM 27 O5' U B 7 -93.722 35.646 38.696 0.50 36.16 O
TER
Atoms:
C2: (-90.916,41.161,40.864)
OP1: (-91.492,35.245,45.527)
OP2: (-93.246,36.920,44.691)
C4: (-91.938,40.036,39.106)
O5': (-90.907,36.939,43.783)
C3': (-89.739,39.439,45.069)
C1': (-89.947,39.928,42.770)
O4': (-89.106,38.805,42.864)
C5': (-89.634,37.009,44.418)
P: (-92.070,36.053,44.424)
O2: (-90.542,42.205,41.423)
C4': (-89.005,38.379,44.248)
C2': (-90.675,40.151,44.092)
O2': (-90.697,41.547,44.303)
N1: (-90.667,39.925,41.490)
N3: (-91.553,41.182,39.674)
N4: (-92.561,40.102,37.929)
C6: (-91.070,38.760,40.902)
C5: (-91.700,38.771,39.720)
O3': (-88.850,40.317,45.765)
OP1: (-91.492,35.245,45.527)
OP2: (-93.246,36.920,44.691)
C4: (-91.938,40.036,39.106)
O5': (-90.907,36.939,43.783)
C3': (-89.739,39.439,45.069)
C1': (-89.947,39.928,42.770)
O4': (-89.106,38.805,42.864)
C5': (-89.634,37.009,44.418)
P: (-92.070,36.053,44.424)
O2: (-90.542,42.205,41.423)
C4': (-89.005,38.379,44.248)
C2': (-90.675,40.151,44.092)
O2': (-90.697,41.547,44.303)
N1: (-90.667,39.925,41.490)
N3: (-91.553,41.182,39.674)
N4: (-92.561,40.102,37.929)
C6: (-91.070,38.760,40.902)
C5: (-91.700,38.771,39.720)
O3': (-88.850,40.317,45.765)
OP1: (-92.681,38.955,32.520)
OP2: (-91.165,40.839,33.386)
C3': (-90.826,36.963,36.895)
C1': (-88.629,37.781,37.075)
C5': (-90.830,37.160,34.340)
O4': (-88.881,37.498,35.708)
C8: (-89.168,40.157,36.343)
O2': (-89.194,35.757,38.259)
C6: (-88.350,42.216,39.079)
C5: (-88.632,41.268,38.075)
C4: (-88.381,39.938,38.379)
P: (-91.376,39.398,33.073)
C4': (-90.099,36.719,35.585)
C2': (-89.680,37.033,37.892)
C2: (-87.671,40.440,40.403)
N1: (-87.859,41.761,40.254)
N3: (-87.898,39.451,39.537)
N6: (-88.540,43.532,38.930)
N7: (-89.132,41.391,36.786)
N9: (-88.725,39.228,37.253)
O5': (-91.087,38.559,34.398)
O3': (-91.718,35.904,37.197)
OP2: (-91.165,40.839,33.386)
C3': (-90.826,36.963,36.895)
C1': (-88.629,37.781,37.075)
C5': (-90.830,37.160,34.340)
O4': (-88.881,37.498,35.708)
C8: (-89.168,40.157,36.343)
O2': (-89.194,35.757,38.259)
C6: (-88.350,42.216,39.079)
C5: (-88.632,41.268,38.075)
C4: (-88.381,39.938,38.379)
P: (-91.376,39.398,33.073)
C4': (-90.099,36.719,35.585)
C2': (-89.680,37.033,37.892)
C2: (-87.671,40.440,40.403)
N1: (-87.859,41.761,40.254)
N3: (-87.898,39.451,39.537)
N6: (-88.540,43.532,38.930)
N7: (-89.132,41.391,36.786)
N9: (-88.725,39.228,37.253)
O5': (-91.087,38.559,34.398)
O3': (-91.718,35.904,37.197)
Image (generated by PyMOL):