Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1J9H:A4:A2
Extra
PDB:
ATOM 1 O3' U A 3 44.794 26.769 24.095 1.00 15.96 O
ATOM 2 P C A 4 44.204 27.989 24.944 1.00 17.03 P
ATOM 3 OP1 C A 4 43.603 27.398 26.176 1.00 16.97 O
ATOM 4 OP2 C A 4 43.390 28.924 24.101 1.00 17.38 O
ATOM 5 O5' C A 4 45.564 28.729 25.279 1.00 16.94 O
ATOM 6 C5' C A 4 46.708 28.009 25.767 1.00 16.22 C
ATOM 7 C4' C A 4 47.968 28.446 25.054 1.00 15.55 C
ATOM 8 O4' C A 4 47.829 28.202 23.629 1.00 18.22 O
ATOM 9 C3' C A 4 48.354 29.917 25.115 1.00 16.31 C
ATOM 10 O3' C A 4 49.028 30.184 26.309 1.00 18.84 O
ATOM 11 C2' C A 4 49.285 30.032 23.916 1.00 16.49 C
ATOM 12 O2' C A 4 50.577 29.465 24.133 1.00 18.92 O
ATOM 13 C1' C A 4 48.514 29.205 22.881 1.00 15.19 C
ATOM 14 N1 C A 4 47.520 30.031 22.143 1.00 14.57 N
ATOM 15 C2 C A 4 47.992 30.975 21.208 1.00 14.92 C
ATOM 16 O2 C A 4 49.223 31.059 21.000 1.00 16.95 O
ATOM 17 N3 C A 4 47.091 31.771 20.553 1.00 13.28 N
ATOM 18 C4 C A 4 45.778 31.654 20.820 1.00 13.19 C
ATOM 19 N4 C A 4 44.902 32.481 20.185 1.00 12.45 N
ATOM 20 C5 C A 4 45.276 30.683 21.757 1.00 13.72 C
ATOM 21 C6 C A 4 46.168 29.902 22.376 1.00 14.07 C
ATOM 22 P G A 5 48.967 31.665 26.961 1.00 17.07 P
ATOM 23 OP1 G A 5 49.567 31.421 28.311 1.00 21.94 O
ATOM 24 OP2 G A 5 47.641 32.306 26.858 1.00 18.44 O
ATOM 25 O5' G A 5 49.981 32.508 26.088 1.00 16.32 O
TER
ATOM 1 O3' U B 1 35.573 29.334 18.908 1.00 17.24 O
ATOM 2 P G B 2 36.081 29.920 20.316 1.00 18.89 P
ATOM 3 OP1 G B 2 35.182 29.421 21.403 1.00 20.98 O
ATOM 4 OP2 G B 2 36.363 31.384 20.207 1.00 20.41 O
ATOM 5 O5' G B 2 37.513 29.215 20.527 1.00 14.75 O
ATOM 6 C5' G B 2 37.690 27.774 20.541 1.00 14.02 C
ATOM 7 C4' G B 2 39.175 27.448 20.673 1.00 14.20 C
ATOM 8 O4' G B 2 39.864 28.029 19.551 1.00 15.03 O
ATOM 9 C3' G B 2 39.792 28.040 21.942 1.00 15.35 C
ATOM 10 O3' G B 2 40.816 27.173 22.455 1.00 15.10 O
ATOM 11 C2' G B 2 40.597 29.230 21.432 1.00 14.61 C
ATOM 12 O2' G B 2 41.681 29.704 22.188 1.00 14.41 O
ATOM 13 C1' G B 2 40.964 28.765 20.015 1.00 11.63 C
ATOM 14 N9 G B 2 41.194 29.882 19.110 1.00 12.77 N
ATOM 15 C8 G B 2 40.288 30.806 18.637 1.00 11.78 C
ATOM 16 N7 G B 2 40.844 31.688 17.850 1.00 12.26 N
ATOM 17 C5 G B 2 42.184 31.327 17.812 1.00 11.13 C
ATOM 18 C6 G B 2 43.264 31.914 17.121 1.00 13.51 C
ATOM 19 O6 G B 2 43.248 32.897 16.404 1.00 12.72 O
ATOM 20 N1 G B 2 44.458 31.227 17.315 1.00 10.73 N
ATOM 21 C2 G B 2 44.588 30.097 18.096 1.00 11.11 C
ATOM 22 N2 G B 2 45.839 29.569 18.141 1.00 12.62 N
ATOM 23 N3 G B 2 43.571 29.545 18.765 1.00 11.91 N
ATOM 24 C4 G B 2 42.410 30.209 18.572 1.00 10.55 C
ATOM 25 P U B 3 40.477 25.891 23.399 1.00 15.96 P
ATOM 26 OP1 U B 3 39.099 25.428 23.097 1.00 18.60 O
ATOM 27 OP2 U B 3 40.799 26.305 24.793 1.00 20.11 O
ATOM 28 O5' U B 3 41.572 24.844 22.907 1.00 15.48 O
TER
ATOM 2 P C A 4 44.204 27.989 24.944 1.00 17.03 P
ATOM 3 OP1 C A 4 43.603 27.398 26.176 1.00 16.97 O
ATOM 4 OP2 C A 4 43.390 28.924 24.101 1.00 17.38 O
ATOM 5 O5' C A 4 45.564 28.729 25.279 1.00 16.94 O
ATOM 6 C5' C A 4 46.708 28.009 25.767 1.00 16.22 C
ATOM 7 C4' C A 4 47.968 28.446 25.054 1.00 15.55 C
ATOM 8 O4' C A 4 47.829 28.202 23.629 1.00 18.22 O
ATOM 9 C3' C A 4 48.354 29.917 25.115 1.00 16.31 C
ATOM 10 O3' C A 4 49.028 30.184 26.309 1.00 18.84 O
ATOM 11 C2' C A 4 49.285 30.032 23.916 1.00 16.49 C
ATOM 12 O2' C A 4 50.577 29.465 24.133 1.00 18.92 O
ATOM 13 C1' C A 4 48.514 29.205 22.881 1.00 15.19 C
ATOM 14 N1 C A 4 47.520 30.031 22.143 1.00 14.57 N
ATOM 15 C2 C A 4 47.992 30.975 21.208 1.00 14.92 C
ATOM 16 O2 C A 4 49.223 31.059 21.000 1.00 16.95 O
ATOM 17 N3 C A 4 47.091 31.771 20.553 1.00 13.28 N
ATOM 18 C4 C A 4 45.778 31.654 20.820 1.00 13.19 C
ATOM 19 N4 C A 4 44.902 32.481 20.185 1.00 12.45 N
ATOM 20 C5 C A 4 45.276 30.683 21.757 1.00 13.72 C
ATOM 21 C6 C A 4 46.168 29.902 22.376 1.00 14.07 C
ATOM 22 P G A 5 48.967 31.665 26.961 1.00 17.07 P
ATOM 23 OP1 G A 5 49.567 31.421 28.311 1.00 21.94 O
ATOM 24 OP2 G A 5 47.641 32.306 26.858 1.00 18.44 O
ATOM 25 O5' G A 5 49.981 32.508 26.088 1.00 16.32 O
TER
ATOM 1 O3' U B 1 35.573 29.334 18.908 1.00 17.24 O
ATOM 2 P G B 2 36.081 29.920 20.316 1.00 18.89 P
ATOM 3 OP1 G B 2 35.182 29.421 21.403 1.00 20.98 O
ATOM 4 OP2 G B 2 36.363 31.384 20.207 1.00 20.41 O
ATOM 5 O5' G B 2 37.513 29.215 20.527 1.00 14.75 O
ATOM 6 C5' G B 2 37.690 27.774 20.541 1.00 14.02 C
ATOM 7 C4' G B 2 39.175 27.448 20.673 1.00 14.20 C
ATOM 8 O4' G B 2 39.864 28.029 19.551 1.00 15.03 O
ATOM 9 C3' G B 2 39.792 28.040 21.942 1.00 15.35 C
ATOM 10 O3' G B 2 40.816 27.173 22.455 1.00 15.10 O
ATOM 11 C2' G B 2 40.597 29.230 21.432 1.00 14.61 C
ATOM 12 O2' G B 2 41.681 29.704 22.188 1.00 14.41 O
ATOM 13 C1' G B 2 40.964 28.765 20.015 1.00 11.63 C
ATOM 14 N9 G B 2 41.194 29.882 19.110 1.00 12.77 N
ATOM 15 C8 G B 2 40.288 30.806 18.637 1.00 11.78 C
ATOM 16 N7 G B 2 40.844 31.688 17.850 1.00 12.26 N
ATOM 17 C5 G B 2 42.184 31.327 17.812 1.00 11.13 C
ATOM 18 C6 G B 2 43.264 31.914 17.121 1.00 13.51 C
ATOM 19 O6 G B 2 43.248 32.897 16.404 1.00 12.72 O
ATOM 20 N1 G B 2 44.458 31.227 17.315 1.00 10.73 N
ATOM 21 C2 G B 2 44.588 30.097 18.096 1.00 11.11 C
ATOM 22 N2 G B 2 45.839 29.569 18.141 1.00 12.62 N
ATOM 23 N3 G B 2 43.571 29.545 18.765 1.00 11.91 N
ATOM 24 C4 G B 2 42.410 30.209 18.572 1.00 10.55 C
ATOM 25 P U B 3 40.477 25.891 23.399 1.00 15.96 P
ATOM 26 OP1 U B 3 39.099 25.428 23.097 1.00 18.60 O
ATOM 27 OP2 U B 3 40.799 26.305 24.793 1.00 20.11 O
ATOM 28 O5' U B 3 41.572 24.844 22.907 1.00 15.48 O
TER
Atoms:
C2: (47.992,30.975,21.208)
OP1: (43.603,27.398,26.176)
OP2: (43.390,28.924,24.101)
C4: (45.778,31.654,20.820)
O5': (45.564,28.729,25.279)
C3': (48.354,29.917,25.115)
C1': (48.514,29.205,22.881)
O4': (47.829,28.202,23.629)
C5': (46.708,28.009,25.767)
P: (44.204,27.989,24.944)
O2: (49.223,31.059,21.000)
C4': (47.968,28.446,25.054)
C2': (49.285,30.032,23.916)
O2': (50.577,29.465,24.133)
N1: (47.520,30.031,22.143)
N3: (47.091,31.771,20.553)
N4: (44.902,32.481,20.185)
C6: (46.168,29.902,22.376)
C5: (45.276,30.683,21.757)
O3': (49.028,30.184,26.309)
OP1: (43.603,27.398,26.176)
OP2: (43.390,28.924,24.101)
C4: (45.778,31.654,20.820)
O5': (45.564,28.729,25.279)
C3': (48.354,29.917,25.115)
C1': (48.514,29.205,22.881)
O4': (47.829,28.202,23.629)
C5': (46.708,28.009,25.767)
P: (44.204,27.989,24.944)
O2: (49.223,31.059,21.000)
C4': (47.968,28.446,25.054)
C2': (49.285,30.032,23.916)
O2': (50.577,29.465,24.133)
N1: (47.520,30.031,22.143)
N3: (47.091,31.771,20.553)
N4: (44.902,32.481,20.185)
C6: (46.168,29.902,22.376)
C5: (45.276,30.683,21.757)
O3': (49.028,30.184,26.309)
OP1: (35.182,29.421,21.403)
OP2: (36.363,31.384,20.207)
C3': (39.792,28.040,21.942)
C1': (40.964,28.765,20.015)
C5': (37.690,27.774,20.541)
O6: (43.248,32.897,16.404)
O4': (39.864,28.029,19.551)
C8: (40.288,30.806,18.637)
C2: (44.588,30.097,18.096)
C6: (43.264,31.914,17.121)
C5: (42.184,31.327,17.812)
C4: (42.410,30.209,18.572)
P: (36.081,29.920,20.316)
C4': (39.175,27.448,20.673)
C2': (40.597,29.230,21.432)
O2': (41.681,29.704,22.188)
N1: (44.458,31.227,17.315)
N2: (45.839,29.569,18.141)
N3: (43.571,29.545,18.765)
N7: (40.844,31.688,17.850)
N9: (41.194,29.882,19.110)
O5': (37.513,29.215,20.527)
O3': (40.816,27.173,22.455)
OP2: (36.363,31.384,20.207)
C3': (39.792,28.040,21.942)
C1': (40.964,28.765,20.015)
C5': (37.690,27.774,20.541)
O6: (43.248,32.897,16.404)
O4': (39.864,28.029,19.551)
C8: (40.288,30.806,18.637)
C2: (44.588,30.097,18.096)
C6: (43.264,31.914,17.121)
C5: (42.184,31.327,17.812)
C4: (42.410,30.209,18.572)
P: (36.081,29.920,20.316)
C4': (39.175,27.448,20.673)
C2': (40.597,29.230,21.432)
O2': (41.681,29.704,22.188)
N1: (44.458,31.227,17.315)
N2: (45.839,29.569,18.141)
N3: (43.571,29.545,18.765)
N7: (40.844,31.688,17.850)
N9: (41.194,29.882,19.110)
O5': (37.513,29.215,20.527)
O3': (40.816,27.173,22.455)
Image (generated by PyMOL):