Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1J9H:B4:B2
Extra
PDB:
ATOM 1 O3' U A 3 44.786 44.132 15.678 1.00 19.72 O
ATOM 2 P C A 4 44.068 43.054 14.746 1.00 22.45 P
ATOM 3 OP1 C A 4 43.478 43.798 13.560 1.00 22.92 O
ATOM 4 OP2 C A 4 43.231 42.137 15.557 1.00 20.89 O
ATOM 5 O5' C A 4 45.334 42.239 14.240 1.00 20.44 O
ATOM 6 C5' C A 4 46.434 42.935 13.649 1.00 19.02 C
ATOM 7 C4' C A 4 47.743 42.486 14.256 1.00 15.31 C
ATOM 8 O4' C A 4 47.756 42.732 15.685 1.00 19.58 O
ATOM 9 C3' C A 4 48.021 40.998 14.152 1.00 16.65 C
ATOM 10 O3' C A 4 48.506 40.670 12.846 1.00 18.41 O
ATOM 11 C2' C A 4 49.064 40.806 15.245 1.00 16.58 C
ATOM 12 O2' C A 4 50.340 41.262 14.838 1.00 21.03 O
ATOM 13 C1' C A 4 48.479 41.691 16.354 1.00 17.13 C
ATOM 14 N1 C A 4 47.541 40.902 17.199 1.00 15.59 N
ATOM 15 C2 C A 4 48.074 39.929 18.063 1.00 14.78 C
ATOM 16 O2 C A 4 49.290 39.821 18.148 1.00 17.89 O
ATOM 17 N3 C A 4 47.231 39.132 18.789 1.00 14.15 N
ATOM 18 C4 C A 4 45.897 39.292 18.674 1.00 14.76 C
ATOM 19 N4 C A 4 45.094 38.471 19.358 1.00 14.57 N
ATOM 20 C5 C A 4 45.329 40.307 17.833 1.00 17.03 C
ATOM 21 C6 C A 4 46.176 41.080 17.127 1.00 16.88 C
ATOM 22 P G A 5 48.320 39.175 12.271 1.00 17.42 P
ATOM 23 OP1 G A 5 48.682 39.273 10.830 1.00 16.01 O
ATOM 24 OP2 G A 5 46.970 38.618 12.633 1.00 18.14 O
ATOM 25 O5' G A 5 49.421 38.362 13.070 1.00 15.37 O
TER
ATOM 1 O3' U B 1 35.672 41.468 21.077 1.00 20.56 O
ATOM 2 P G B 2 36.165 41.070 19.599 1.00 25.27 P
ATOM 3 OP1 G B 2 35.228 41.808 18.693 1.00 25.88 O
ATOM 4 OP2 G B 2 36.311 39.591 19.467 1.00 23.14 O
ATOM 5 O5' G B 2 37.615 41.729 19.420 1.00 18.20 O
ATOM 6 C5' G B 2 37.831 43.162 19.375 1.00 17.79 C
ATOM 7 C4' G B 2 39.318 43.447 19.247 1.00 14.83 C
ATOM 8 O4' G B 2 40.040 42.802 20.329 1.00 15.81 O
ATOM 9 C3' G B 2 39.857 42.882 17.935 1.00 16.33 C
ATOM 10 O3' G B 2 40.853 43.754 17.378 1.00 17.66 O
ATOM 11 C2' G B 2 40.685 41.673 18.364 1.00 17.15 C
ATOM 12 O2' G B 2 41.807 41.365 17.567 1.00 18.08 O
ATOM 13 C1' G B 2 41.104 42.075 19.778 1.00 15.21 C
ATOM 14 N9 G B 2 41.411 40.934 20.614 1.00 14.25 N
ATOM 15 C8 G B 2 40.555 39.967 21.067 1.00 14.02 C
ATOM 16 N7 G B 2 41.157 39.055 21.787 1.00 14.19 N
ATOM 17 C5 G B 2 42.482 39.450 21.804 1.00 12.33 C
ATOM 18 C6 G B 2 43.590 38.872 22.452 1.00 13.01 C
ATOM 19 O6 G B 2 43.617 37.868 23.173 1.00 12.52 O
ATOM 20 N1 G B 2 44.751 39.587 22.228 1.00 12.29 N
ATOM 21 C2 G B 2 44.819 40.750 21.448 1.00 12.17 C
ATOM 22 N2 G B 2 46.027 41.274 21.317 1.00 13.27 N
ATOM 23 N3 G B 2 43.784 41.305 20.862 1.00 12.79 N
ATOM 24 C4 G B 2 42.654 40.606 21.078 1.00 13.42 C
ATOM 25 P U B 3 40.456 45.073 16.525 1.00 19.70 P
ATOM 26 OP1 U B 3 39.140 45.600 16.985 1.00 20.12 O
ATOM 27 OP2 U B 3 40.668 44.797 15.080 1.00 20.78 O
ATOM 28 O5' U B 3 41.599 46.057 17.000 1.00 17.45 O
TER
ATOM 2 P C A 4 44.068 43.054 14.746 1.00 22.45 P
ATOM 3 OP1 C A 4 43.478 43.798 13.560 1.00 22.92 O
ATOM 4 OP2 C A 4 43.231 42.137 15.557 1.00 20.89 O
ATOM 5 O5' C A 4 45.334 42.239 14.240 1.00 20.44 O
ATOM 6 C5' C A 4 46.434 42.935 13.649 1.00 19.02 C
ATOM 7 C4' C A 4 47.743 42.486 14.256 1.00 15.31 C
ATOM 8 O4' C A 4 47.756 42.732 15.685 1.00 19.58 O
ATOM 9 C3' C A 4 48.021 40.998 14.152 1.00 16.65 C
ATOM 10 O3' C A 4 48.506 40.670 12.846 1.00 18.41 O
ATOM 11 C2' C A 4 49.064 40.806 15.245 1.00 16.58 C
ATOM 12 O2' C A 4 50.340 41.262 14.838 1.00 21.03 O
ATOM 13 C1' C A 4 48.479 41.691 16.354 1.00 17.13 C
ATOM 14 N1 C A 4 47.541 40.902 17.199 1.00 15.59 N
ATOM 15 C2 C A 4 48.074 39.929 18.063 1.00 14.78 C
ATOM 16 O2 C A 4 49.290 39.821 18.148 1.00 17.89 O
ATOM 17 N3 C A 4 47.231 39.132 18.789 1.00 14.15 N
ATOM 18 C4 C A 4 45.897 39.292 18.674 1.00 14.76 C
ATOM 19 N4 C A 4 45.094 38.471 19.358 1.00 14.57 N
ATOM 20 C5 C A 4 45.329 40.307 17.833 1.00 17.03 C
ATOM 21 C6 C A 4 46.176 41.080 17.127 1.00 16.88 C
ATOM 22 P G A 5 48.320 39.175 12.271 1.00 17.42 P
ATOM 23 OP1 G A 5 48.682 39.273 10.830 1.00 16.01 O
ATOM 24 OP2 G A 5 46.970 38.618 12.633 1.00 18.14 O
ATOM 25 O5' G A 5 49.421 38.362 13.070 1.00 15.37 O
TER
ATOM 1 O3' U B 1 35.672 41.468 21.077 1.00 20.56 O
ATOM 2 P G B 2 36.165 41.070 19.599 1.00 25.27 P
ATOM 3 OP1 G B 2 35.228 41.808 18.693 1.00 25.88 O
ATOM 4 OP2 G B 2 36.311 39.591 19.467 1.00 23.14 O
ATOM 5 O5' G B 2 37.615 41.729 19.420 1.00 18.20 O
ATOM 6 C5' G B 2 37.831 43.162 19.375 1.00 17.79 C
ATOM 7 C4' G B 2 39.318 43.447 19.247 1.00 14.83 C
ATOM 8 O4' G B 2 40.040 42.802 20.329 1.00 15.81 O
ATOM 9 C3' G B 2 39.857 42.882 17.935 1.00 16.33 C
ATOM 10 O3' G B 2 40.853 43.754 17.378 1.00 17.66 O
ATOM 11 C2' G B 2 40.685 41.673 18.364 1.00 17.15 C
ATOM 12 O2' G B 2 41.807 41.365 17.567 1.00 18.08 O
ATOM 13 C1' G B 2 41.104 42.075 19.778 1.00 15.21 C
ATOM 14 N9 G B 2 41.411 40.934 20.614 1.00 14.25 N
ATOM 15 C8 G B 2 40.555 39.967 21.067 1.00 14.02 C
ATOM 16 N7 G B 2 41.157 39.055 21.787 1.00 14.19 N
ATOM 17 C5 G B 2 42.482 39.450 21.804 1.00 12.33 C
ATOM 18 C6 G B 2 43.590 38.872 22.452 1.00 13.01 C
ATOM 19 O6 G B 2 43.617 37.868 23.173 1.00 12.52 O
ATOM 20 N1 G B 2 44.751 39.587 22.228 1.00 12.29 N
ATOM 21 C2 G B 2 44.819 40.750 21.448 1.00 12.17 C
ATOM 22 N2 G B 2 46.027 41.274 21.317 1.00 13.27 N
ATOM 23 N3 G B 2 43.784 41.305 20.862 1.00 12.79 N
ATOM 24 C4 G B 2 42.654 40.606 21.078 1.00 13.42 C
ATOM 25 P U B 3 40.456 45.073 16.525 1.00 19.70 P
ATOM 26 OP1 U B 3 39.140 45.600 16.985 1.00 20.12 O
ATOM 27 OP2 U B 3 40.668 44.797 15.080 1.00 20.78 O
ATOM 28 O5' U B 3 41.599 46.057 17.000 1.00 17.45 O
TER
Atoms:
C2: (48.074,39.929,18.063)
OP1: (43.478,43.798,13.560)
OP2: (43.231,42.137,15.557)
C4: (45.897,39.292,18.674)
O5': (45.334,42.239,14.240)
C3': (48.021,40.998,14.152)
C1': (48.479,41.691,16.354)
O4': (47.756,42.732,15.685)
C5': (46.434,42.935,13.649)
P: (44.068,43.054,14.746)
O2: (49.290,39.821,18.148)
C4': (47.743,42.486,14.256)
C2': (49.064,40.806,15.245)
O2': (50.340,41.262,14.838)
N1: (47.541,40.902,17.199)
N3: (47.231,39.132,18.789)
N4: (45.094,38.471,19.358)
C6: (46.176,41.080,17.127)
C5: (45.329,40.307,17.833)
O3': (48.506,40.670,12.846)
OP1: (43.478,43.798,13.560)
OP2: (43.231,42.137,15.557)
C4: (45.897,39.292,18.674)
O5': (45.334,42.239,14.240)
C3': (48.021,40.998,14.152)
C1': (48.479,41.691,16.354)
O4': (47.756,42.732,15.685)
C5': (46.434,42.935,13.649)
P: (44.068,43.054,14.746)
O2: (49.290,39.821,18.148)
C4': (47.743,42.486,14.256)
C2': (49.064,40.806,15.245)
O2': (50.340,41.262,14.838)
N1: (47.541,40.902,17.199)
N3: (47.231,39.132,18.789)
N4: (45.094,38.471,19.358)
C6: (46.176,41.080,17.127)
C5: (45.329,40.307,17.833)
O3': (48.506,40.670,12.846)
OP1: (35.228,41.808,18.693)
OP2: (36.311,39.591,19.467)
C3': (39.857,42.882,17.935)
C1': (41.104,42.075,19.778)
C5': (37.831,43.162,19.375)
O6: (43.617,37.868,23.173)
O4': (40.040,42.802,20.329)
C8: (40.555,39.967,21.067)
C2: (44.819,40.750,21.448)
C6: (43.590,38.872,22.452)
C5: (42.482,39.450,21.804)
C4: (42.654,40.606,21.078)
P: (36.165,41.070,19.599)
C4': (39.318,43.447,19.247)
C2': (40.685,41.673,18.364)
O2': (41.807,41.365,17.567)
N1: (44.751,39.587,22.228)
N2: (46.027,41.274,21.317)
N3: (43.784,41.305,20.862)
N7: (41.157,39.055,21.787)
N9: (41.411,40.934,20.614)
O5': (37.615,41.729,19.420)
O3': (40.853,43.754,17.378)
OP2: (36.311,39.591,19.467)
C3': (39.857,42.882,17.935)
C1': (41.104,42.075,19.778)
C5': (37.831,43.162,19.375)
O6: (43.617,37.868,23.173)
O4': (40.040,42.802,20.329)
C8: (40.555,39.967,21.067)
C2: (44.819,40.750,21.448)
C6: (43.590,38.872,22.452)
C5: (42.482,39.450,21.804)
C4: (42.654,40.606,21.078)
P: (36.165,41.070,19.599)
C4': (39.318,43.447,19.247)
C2': (40.685,41.673,18.364)
O2': (41.807,41.365,17.567)
N1: (44.751,39.587,22.228)
N2: (46.027,41.274,21.317)
N3: (43.784,41.305,20.862)
N7: (41.157,39.055,21.787)
N9: (41.411,40.934,20.614)
O5': (37.615,41.729,19.420)
O3': (40.853,43.754,17.378)
Image (generated by PyMOL):