ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1U9S:A80:A79

Extra

PDB:
ATOM 1 O3' G A 79 64.502 -27.899 128.088 1.00100.21 O
ATOM 2 P C A 80 63.140 -27.954 128.964 1.00102.34 P
ATOM 3 OP1 C A 80 62.162 -28.863 128.300 1.00 96.73 O
ATOM 4 OP2 C A 80 62.732 -26.571 129.317 1.00105.21 O
ATOM 5 O5' C A 80 63.586 -28.649 130.324 1.00 92.80 O
ATOM 6 C5' C A 80 62.721 -29.553 130.990 1.00 84.66 C
ATOM 7 C4' C A 80 62.856 -29.397 132.483 1.00 82.87 C
ATOM 8 O4' C A 80 64.272 -29.270 132.805 1.00 79.52 O
ATOM 9 C3' C A 80 62.249 -28.129 133.063 1.00 83.57 C
ATOM 10 O3' C A 80 60.857 -28.280 133.328 1.00 88.09 O
ATOM 11 C2' C A 80 63.041 -27.949 134.352 1.00 79.53 C
ATOM 12 O2' C A 80 62.565 -28.752 135.418 1.00 73.68 O
ATOM 13 C1' C A 80 64.439 -28.399 133.916 1.00 74.14 C
ATOM 14 N1 C A 80 65.312 -27.279 133.522 1.00 69.73 N
ATOM 15 C2 C A 80 65.696 -26.356 134.502 1.00 70.36 C
ATOM 16 O2 C A 80 65.305 -26.529 135.668 1.00 70.11 O
ATOM 17 N3 C A 80 66.475 -25.301 134.155 1.00 67.06 N
ATOM 18 C4 C A 80 66.865 -25.153 132.891 1.00 69.35 C
ATOM 19 N4 C A 80 67.619 -24.085 132.592 1.00 68.34 N
ATOM 20 C5 C A 80 66.499 -26.087 131.874 1.00 67.92 C
ATOM 21 C6 C A 80 65.733 -27.124 132.229 1.00 69.73 C
ATOM 22 P G A 81 59.965 -26.979 133.654 1.00 93.00 P
ATOM 23 OP1 G A 81 58.612 -27.434 134.071 1.00 88.93 O
ATOM 24 OP2 G A 81 60.104 -26.037 132.511 1.00 94.62 O
ATOM 25 O5' G A 81 60.682 -26.319 134.915 1.00 86.19 O
TER

ATOM 1 O3' U B 78 69.825 -26.702 126.027 1.00 73.36 O
ATOM 2 P G B 79 68.540 -26.171 125.231 1.00 83.25 P
ATOM 3 OP1 G B 79 67.942 -27.317 124.493 1.00 85.95 O
ATOM 4 OP2 G B 79 68.996 -24.981 124.471 1.00 80.22 O
ATOM 5 O5' G B 79 67.532 -25.726 126.392 1.00 84.37 O
ATOM 6 C5' G B 79 67.657 -26.270 127.711 1.00 90.01 C
ATOM 7 C4' G B 79 66.350 -26.170 128.490 1.00 92.48 C
ATOM 8 O4' G B 79 66.084 -24.785 128.830 1.00 93.68 O
ATOM 9 C3' G B 79 65.113 -26.641 127.748 1.00 94.10 C
ATOM 10 O3' G B 79 64.502 -27.899 128.088 1.00100.21 O
ATOM 11 C2' G B 79 64.431 -25.398 127.183 1.00 94.97 C
ATOM 12 O2' G B 79 63.024 -25.389 127.293 1.00102.81 O
ATOM 13 C1' G B 79 64.986 -24.288 128.081 1.00 92.52 C
ATOM 14 N9 G B 79 65.423 -23.090 127.370 1.00 89.19 N
ATOM 15 C8 G B 79 65.616 -22.947 126.018 1.00 87.76 C
ATOM 16 N7 G B 79 66.017 -21.751 125.684 1.00 87.45 N
ATOM 17 C5 G B 79 66.092 -21.064 126.887 1.00 88.67 C
ATOM 18 C6 G B 79 66.476 -19.723 127.161 1.00 91.33 C
ATOM 19 O6 G B 79 66.839 -18.847 126.367 1.00 95.99 O
ATOM 20 N1 G B 79 66.409 -19.438 128.522 1.00 89.35 N
ATOM 21 C2 G B 79 66.024 -20.325 129.494 1.00 87.70 C
ATOM 22 N2 G B 79 66.024 -19.858 130.753 1.00 86.19 N
ATOM 23 N3 G B 79 65.663 -21.577 129.251 1.00 87.91 N
ATOM 24 C4 G B 79 65.724 -21.875 127.937 1.00 87.10 C
ATOM 25 P C B 80 63.140 -27.954 128.964 1.00102.34 P
ATOM 26 OP1 C B 80 62.162 -28.863 128.300 1.00 96.73 O
ATOM 27 OP2 C B 80 62.732 -26.571 129.317 1.00105.21 O
ATOM 28 O5' C B 80 63.586 -28.649 130.324 1.00 92.80 O
TER

Atoms:
C2: (65.696,-26.356,134.502)
OP1: (62.162,-28.863,128.300)
OP2: (62.732,-26.571,129.317)
C4: (66.865,-25.153,132.891)
O5': (63.586,-28.649,130.324)
C3': (62.249,-28.129,133.063)
C1': (64.439,-28.399,133.916)
O4': (64.272,-29.270,132.805)
C5': (62.721,-29.553,130.990)
P: (63.140,-27.954,128.964)
O2: (65.305,-26.529,135.668)
C4': (62.856,-29.397,132.483)
C2': (63.041,-27.949,134.352)
O2': (62.565,-28.752,135.418)
N1: (65.312,-27.279,133.522)
N3: (66.475,-25.301,134.155)
N4: (67.619,-24.085,132.592)
C6: (65.733,-27.124,132.229)
C5: (66.499,-26.087,131.874)
O3': (60.857,-28.280,133.328)
OP1: (67.942,-27.317,124.493)
OP2: (68.996,-24.981,124.471)
C3': (65.113,-26.641,127.748)
C1': (64.986,-24.288,128.081)
C5': (67.657,-26.270,127.711)
O6: (66.839,-18.847,126.367)
O4': (66.084,-24.785,128.830)
C8: (65.616,-22.947,126.018)
C2: (66.024,-20.325,129.494)
C6: (66.476,-19.723,127.161)
C5: (66.092,-21.064,126.887)
C4: (65.724,-21.875,127.937)
P: (68.540,-26.171,125.231)
C4': (66.350,-26.170,128.490)
C2': (64.431,-25.398,127.183)
O2': (63.024,-25.389,127.293)
N1: (66.409,-19.438,128.522)
N2: (66.024,-19.858,130.753)
N3: (65.663,-21.577,129.251)
N7: (66.017,-21.751,125.684)
N9: (65.423,-23.090,127.370)
O5': (67.532,-25.726,126.392)
O3': (64.502,-27.899,128.088)
Image (generated by PyMOL):
PyMOL image
show in jmol