Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01312:01310
Extra
PDB:
ATOM 1 O3' A A1311 37.525 118.809 58.952 1.00 47.54 O
ATOM 2 P C A1312 37.746 117.626 60.033 1.00 50.21 P
ATOM 3 OP1 C A1312 38.602 118.126 61.158 1.00 41.95 O
ATOM 4 OP2 C A1312 38.074 116.328 59.374 1.00 48.70 O
ATOM 5 O5' C A1312 36.267 117.508 60.611 1.00 44.21 O
ATOM 6 C5' C A1312 35.466 118.696 60.779 1.00 35.10 C
ATOM 7 C4' C A1312 34.255 118.389 61.606 1.00 33.77 C
ATOM 8 O4' C A1312 33.252 117.727 60.804 1.00 34.03 O
ATOM 9 C3' C A1312 34.506 117.458 62.779 1.00 31.45 C
ATOM 10 O3' C A1312 35.014 118.231 63.863 1.00 29.31 O
ATOM 11 C2' C A1312 33.119 116.877 63.027 1.00 31.21 C
ATOM 12 O2' C A1312 32.288 117.763 63.747 1.00 32.42 O
ATOM 13 C1' C A1312 32.578 116.767 61.597 1.00 31.47 C
ATOM 14 N1 C A1312 32.773 115.449 60.978 1.00 28.99 N
ATOM 15 C2 C A1312 31.938 114.400 61.354 1.00 26.55 C
ATOM 16 O2 C A1312 31.049 114.614 62.194 1.00 28.98 O
ATOM 17 N3 C A1312 32.112 113.186 60.794 1.00 23.31 N
ATOM 18 C4 C A1312 33.062 113.007 59.875 1.00 24.73 C
ATOM 19 N4 C A1312 33.186 111.802 59.327 1.00 20.98 N
ATOM 20 C5 C A1312 33.927 114.061 59.472 1.00 26.99 C
ATOM 21 C6 C A1312 33.753 115.253 60.046 1.00 27.83 C
ATOM 22 P G A1313 35.517 117.519 65.206 1.00 27.20 P
ATOM 23 OP1 G A1313 36.798 118.166 65.574 1.00 27.68 O
ATOM 24 OP2 G A1313 35.460 116.041 65.052 1.00 24.24 O
ATOM 25 O5' G A1313 34.427 117.982 66.269 1.00 23.41 O
TER
ATOM 1 O3' U B1309 34.294 111.985 51.077 1.00 42.79 O
ATOM 2 P G B1310 35.342 111.285 52.088 1.00 47.64 P
ATOM 3 OP1 G B1310 36.509 110.889 51.278 1.00 46.30 O
ATOM 4 OP2 G B1310 34.662 110.269 52.937 1.00 44.88 O
ATOM 5 O5' G B1310 35.797 112.480 53.033 1.00 44.96 O
ATOM 6 C5' G B1310 36.095 113.750 52.466 1.00 42.94 C
ATOM 7 C4' G B1310 35.950 114.834 53.494 1.00 41.29 C
ATOM 8 O4' G B1310 34.579 114.878 53.980 1.00 40.91 O
ATOM 9 C3' G B1310 36.841 114.716 54.722 1.00 39.94 C
ATOM 10 O3' G B1310 37.252 116.018 55.089 1.00 39.12 O
ATOM 11 C2' G B1310 35.881 114.194 55.783 1.00 40.33 C
ATOM 12 O2' G B1310 36.261 114.565 57.095 1.00 42.74 O
ATOM 13 C1' G B1310 34.590 114.904 55.384 1.00 38.00 C
ATOM 14 N9 G B1310 33.387 114.251 55.885 1.00 34.51 N
ATOM 15 C8 G B1310 33.043 112.925 55.779 1.00 33.45 C
ATOM 16 N7 G B1310 31.963 112.625 56.448 1.00 32.39 N
ATOM 17 C5 G B1310 31.556 113.830 57.000 1.00 31.33 C
ATOM 18 C6 G B1310 30.468 114.127 57.850 1.00 30.82 C
ATOM 19 O6 G B1310 29.624 113.358 58.311 1.00 33.49 O
ATOM 20 N1 G B1310 30.423 115.479 58.171 1.00 32.42 N
ATOM 21 C2 G B1310 31.320 116.425 57.733 1.00 33.04 C
ATOM 22 N2 G B1310 31.125 117.683 58.156 1.00 30.94 N
ATOM 23 N3 G B1310 32.340 116.156 56.942 1.00 32.40 N
ATOM 24 C4 G B1310 32.403 114.848 56.625 1.00 32.55 C
ATOM 25 P A B1311 38.463 116.722 54.307 1.00 37.60 P
ATOM 26 OP1 A B1311 37.830 117.650 53.334 1.00 33.65 O
ATOM 27 OP2 A B1311 39.406 115.687 53.815 1.00 35.31 O
ATOM 28 O5' A B1311 39.183 117.576 55.452 1.00 38.34 O
TER
ATOM 2 P C A1312 37.746 117.626 60.033 1.00 50.21 P
ATOM 3 OP1 C A1312 38.602 118.126 61.158 1.00 41.95 O
ATOM 4 OP2 C A1312 38.074 116.328 59.374 1.00 48.70 O
ATOM 5 O5' C A1312 36.267 117.508 60.611 1.00 44.21 O
ATOM 6 C5' C A1312 35.466 118.696 60.779 1.00 35.10 C
ATOM 7 C4' C A1312 34.255 118.389 61.606 1.00 33.77 C
ATOM 8 O4' C A1312 33.252 117.727 60.804 1.00 34.03 O
ATOM 9 C3' C A1312 34.506 117.458 62.779 1.00 31.45 C
ATOM 10 O3' C A1312 35.014 118.231 63.863 1.00 29.31 O
ATOM 11 C2' C A1312 33.119 116.877 63.027 1.00 31.21 C
ATOM 12 O2' C A1312 32.288 117.763 63.747 1.00 32.42 O
ATOM 13 C1' C A1312 32.578 116.767 61.597 1.00 31.47 C
ATOM 14 N1 C A1312 32.773 115.449 60.978 1.00 28.99 N
ATOM 15 C2 C A1312 31.938 114.400 61.354 1.00 26.55 C
ATOM 16 O2 C A1312 31.049 114.614 62.194 1.00 28.98 O
ATOM 17 N3 C A1312 32.112 113.186 60.794 1.00 23.31 N
ATOM 18 C4 C A1312 33.062 113.007 59.875 1.00 24.73 C
ATOM 19 N4 C A1312 33.186 111.802 59.327 1.00 20.98 N
ATOM 20 C5 C A1312 33.927 114.061 59.472 1.00 26.99 C
ATOM 21 C6 C A1312 33.753 115.253 60.046 1.00 27.83 C
ATOM 22 P G A1313 35.517 117.519 65.206 1.00 27.20 P
ATOM 23 OP1 G A1313 36.798 118.166 65.574 1.00 27.68 O
ATOM 24 OP2 G A1313 35.460 116.041 65.052 1.00 24.24 O
ATOM 25 O5' G A1313 34.427 117.982 66.269 1.00 23.41 O
TER
ATOM 1 O3' U B1309 34.294 111.985 51.077 1.00 42.79 O
ATOM 2 P G B1310 35.342 111.285 52.088 1.00 47.64 P
ATOM 3 OP1 G B1310 36.509 110.889 51.278 1.00 46.30 O
ATOM 4 OP2 G B1310 34.662 110.269 52.937 1.00 44.88 O
ATOM 5 O5' G B1310 35.797 112.480 53.033 1.00 44.96 O
ATOM 6 C5' G B1310 36.095 113.750 52.466 1.00 42.94 C
ATOM 7 C4' G B1310 35.950 114.834 53.494 1.00 41.29 C
ATOM 8 O4' G B1310 34.579 114.878 53.980 1.00 40.91 O
ATOM 9 C3' G B1310 36.841 114.716 54.722 1.00 39.94 C
ATOM 10 O3' G B1310 37.252 116.018 55.089 1.00 39.12 O
ATOM 11 C2' G B1310 35.881 114.194 55.783 1.00 40.33 C
ATOM 12 O2' G B1310 36.261 114.565 57.095 1.00 42.74 O
ATOM 13 C1' G B1310 34.590 114.904 55.384 1.00 38.00 C
ATOM 14 N9 G B1310 33.387 114.251 55.885 1.00 34.51 N
ATOM 15 C8 G B1310 33.043 112.925 55.779 1.00 33.45 C
ATOM 16 N7 G B1310 31.963 112.625 56.448 1.00 32.39 N
ATOM 17 C5 G B1310 31.556 113.830 57.000 1.00 31.33 C
ATOM 18 C6 G B1310 30.468 114.127 57.850 1.00 30.82 C
ATOM 19 O6 G B1310 29.624 113.358 58.311 1.00 33.49 O
ATOM 20 N1 G B1310 30.423 115.479 58.171 1.00 32.42 N
ATOM 21 C2 G B1310 31.320 116.425 57.733 1.00 33.04 C
ATOM 22 N2 G B1310 31.125 117.683 58.156 1.00 30.94 N
ATOM 23 N3 G B1310 32.340 116.156 56.942 1.00 32.40 N
ATOM 24 C4 G B1310 32.403 114.848 56.625 1.00 32.55 C
ATOM 25 P A B1311 38.463 116.722 54.307 1.00 37.60 P
ATOM 26 OP1 A B1311 37.830 117.650 53.334 1.00 33.65 O
ATOM 27 OP2 A B1311 39.406 115.687 53.815 1.00 35.31 O
ATOM 28 O5' A B1311 39.183 117.576 55.452 1.00 38.34 O
TER
Atoms:
C2: (31.938,114.400,61.354)
OP1: (38.602,118.126,61.158)
OP2: (38.074,116.328,59.374)
C4: (33.062,113.007,59.875)
O5': (36.267,117.508,60.611)
C3': (34.506,117.458,62.779)
C1': (32.578,116.767,61.597)
O4': (33.252,117.727,60.804)
C5': (35.466,118.696,60.779)
P: (37.746,117.626,60.033)
O2: (31.049,114.614,62.194)
C4': (34.255,118.389,61.606)
C2': (33.119,116.877,63.027)
O2': (32.288,117.763,63.747)
N1: (32.773,115.449,60.978)
N3: (32.112,113.186,60.794)
N4: (33.186,111.802,59.327)
C6: (33.753,115.253,60.046)
C5: (33.927,114.061,59.472)
O3': (35.014,118.231,63.863)
OP1: (38.602,118.126,61.158)
OP2: (38.074,116.328,59.374)
C4: (33.062,113.007,59.875)
O5': (36.267,117.508,60.611)
C3': (34.506,117.458,62.779)
C1': (32.578,116.767,61.597)
O4': (33.252,117.727,60.804)
C5': (35.466,118.696,60.779)
P: (37.746,117.626,60.033)
O2: (31.049,114.614,62.194)
C4': (34.255,118.389,61.606)
C2': (33.119,116.877,63.027)
O2': (32.288,117.763,63.747)
N1: (32.773,115.449,60.978)
N3: (32.112,113.186,60.794)
N4: (33.186,111.802,59.327)
C6: (33.753,115.253,60.046)
C5: (33.927,114.061,59.472)
O3': (35.014,118.231,63.863)
OP1: (36.509,110.889,51.278)
OP2: (34.662,110.269,52.937)
C3': (36.841,114.716,54.722)
C1': (34.590,114.904,55.384)
C5': (36.095,113.750,52.466)
O6: (29.624,113.358,58.311)
O4': (34.579,114.878,53.980)
C8: (33.043,112.925,55.779)
C2: (31.320,116.425,57.733)
C6: (30.468,114.127,57.850)
C5: (31.556,113.830,57.000)
C4: (32.403,114.848,56.625)
P: (35.342,111.285,52.088)
C4': (35.950,114.834,53.494)
C2': (35.881,114.194,55.783)
O2': (36.261,114.565,57.095)
N1: (30.423,115.479,58.171)
N2: (31.125,117.683,58.156)
N3: (32.340,116.156,56.942)
N7: (31.963,112.625,56.448)
N9: (33.387,114.251,55.885)
O5': (35.797,112.480,53.033)
O3': (37.252,116.018,55.089)
OP2: (34.662,110.269,52.937)
C3': (36.841,114.716,54.722)
C1': (34.590,114.904,55.384)
C5': (36.095,113.750,52.466)
O6: (29.624,113.358,58.311)
O4': (34.579,114.878,53.980)
C8: (33.043,112.925,55.779)
C2: (31.320,116.425,57.733)
C6: (30.468,114.127,57.850)
C5: (31.556,113.830,57.000)
C4: (32.403,114.848,56.625)
P: (35.342,111.285,52.088)
C4': (35.950,114.834,53.494)
C2': (35.881,114.194,55.783)
O2': (36.261,114.565,57.095)
N1: (30.423,115.479,58.171)
N2: (31.125,117.683,58.156)
N3: (32.340,116.156,56.942)
N7: (31.963,112.625,56.448)
N9: (33.387,114.251,55.885)
O5': (35.797,112.480,53.033)
O3': (37.252,116.018,55.089)
Image (generated by PyMOL):