Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0438:0436
Extra
PDB:
ATOM 1 O3' A A 437 32.392 120.158 47.368 1.00 32.35 O
ATOM 2 P C A 438 33.617 121.108 46.956 1.00 33.11 P
ATOM 3 OP1 C A 438 33.113 122.443 46.591 1.00 31.75 O
ATOM 4 OP2 C A 438 34.500 120.373 46.014 1.00 30.40 O
ATOM 5 O5' C A 438 34.391 121.302 48.327 1.00 35.42 O
ATOM 6 C5' C A 438 35.107 120.218 48.927 1.00 37.07 C
ATOM 7 C4' C A 438 36.424 120.712 49.461 1.00 37.20 C
ATOM 8 O4' C A 438 37.308 121.062 48.363 1.00 36.93 O
ATOM 9 C3' C A 438 36.332 121.980 50.287 1.00 36.69 C
ATOM 10 O3' C A 438 35.941 121.677 51.618 1.00 35.48 O
ATOM 11 C2' C A 438 37.751 122.512 50.183 1.00 37.84 C
ATOM 12 O2' C A 438 38.638 121.783 51.006 1.00 39.34 O
ATOM 13 C1' C A 438 38.078 122.193 48.721 1.00 37.25 C
ATOM 14 N1 C A 438 37.741 123.291 47.799 1.00 38.98 N
ATOM 15 C2 C A 438 38.621 124.368 47.686 1.00 39.74 C
ATOM 16 O2 C A 438 39.669 124.360 48.348 1.00 39.42 O
ATOM 17 N3 C A 438 38.309 125.392 46.857 1.00 40.55 N
ATOM 18 C4 C A 438 37.174 125.365 46.159 1.00 39.67 C
ATOM 19 N4 C A 438 36.902 126.401 45.374 1.00 41.16 N
ATOM 20 C5 C A 438 36.267 124.276 46.242 1.00 40.00 C
ATOM 21 C6 C A 438 36.586 123.269 47.067 1.00 40.31 C
ATOM 22 P C A 439 34.983 122.683 52.416 1.00 36.43 P
ATOM 23 OP1 C A 439 34.666 122.039 53.719 1.00 36.56 O
ATOM 24 OP2 C A 439 33.880 123.117 51.532 1.00 39.06 O
ATOM 25 O5' C A 439 35.922 123.940 52.684 1.00 37.31 O
TER
ATOM 1 O3' A B 435 33.410 123.430 37.004 1.00 37.28 O
ATOM 2 P G B 436 32.593 123.766 38.346 1.00 37.71 P
ATOM 3 OP1 G B 436 31.234 123.204 38.151 1.00 38.41 O
ATOM 4 OP2 G B 436 32.747 125.210 38.656 1.00 35.31 O
ATOM 5 O5' G B 436 33.324 122.899 39.469 1.00 37.94 O
ATOM 6 C5' G B 436 33.599 121.490 39.269 1.00 37.11 C
ATOM 7 C4' G B 436 34.348 120.916 40.458 1.00 36.85 C
ATOM 8 O4' G B 436 35.599 121.635 40.622 1.00 40.03 O
ATOM 9 C3' G B 436 33.645 121.000 41.809 1.00 34.80 C
ATOM 10 O3' G B 436 34.123 119.946 42.652 1.00 33.18 O
ATOM 11 C2' G B 436 34.174 122.316 42.359 1.00 34.91 C
ATOM 12 O2' G B 436 34.109 122.365 43.765 1.00 34.70 O
ATOM 13 C1' G B 436 35.628 122.259 41.893 1.00 39.05 C
ATOM 14 N9 G B 436 36.287 123.554 41.749 1.00 41.28 N
ATOM 15 C8 G B 436 35.939 124.562 40.885 1.00 42.87 C
ATOM 16 N7 G B 436 36.719 125.604 40.968 1.00 45.19 N
ATOM 17 C5 G B 436 37.642 125.267 41.950 1.00 43.84 C
ATOM 18 C6 G B 436 38.737 126.007 42.474 1.00 42.33 C
ATOM 19 O6 G B 436 39.127 127.128 42.157 1.00 40.74 O
ATOM 20 N1 G B 436 39.404 125.302 43.466 1.00 43.59 N
ATOM 21 C2 G B 436 39.068 124.043 43.899 1.00 44.75 C
ATOM 22 N2 G B 436 39.826 123.544 44.887 1.00 43.90 N
ATOM 23 N3 G B 436 38.058 123.331 43.408 1.00 44.09 N
ATOM 24 C4 G B 436 37.389 124.005 42.445 1.00 43.24 C
ATOM 25 P A B 437 33.437 118.492 42.607 1.00 31.01 P
ATOM 26 OP1 A B 437 34.526 117.489 42.479 1.00 27.83 O
ATOM 27 OP2 A B 437 32.357 118.537 41.589 1.00 31.42 O
ATOM 28 O5' A B 437 32.792 118.317 44.053 1.00 28.65 O
TER
ATOM 2 P C A 438 33.617 121.108 46.956 1.00 33.11 P
ATOM 3 OP1 C A 438 33.113 122.443 46.591 1.00 31.75 O
ATOM 4 OP2 C A 438 34.500 120.373 46.014 1.00 30.40 O
ATOM 5 O5' C A 438 34.391 121.302 48.327 1.00 35.42 O
ATOM 6 C5' C A 438 35.107 120.218 48.927 1.00 37.07 C
ATOM 7 C4' C A 438 36.424 120.712 49.461 1.00 37.20 C
ATOM 8 O4' C A 438 37.308 121.062 48.363 1.00 36.93 O
ATOM 9 C3' C A 438 36.332 121.980 50.287 1.00 36.69 C
ATOM 10 O3' C A 438 35.941 121.677 51.618 1.00 35.48 O
ATOM 11 C2' C A 438 37.751 122.512 50.183 1.00 37.84 C
ATOM 12 O2' C A 438 38.638 121.783 51.006 1.00 39.34 O
ATOM 13 C1' C A 438 38.078 122.193 48.721 1.00 37.25 C
ATOM 14 N1 C A 438 37.741 123.291 47.799 1.00 38.98 N
ATOM 15 C2 C A 438 38.621 124.368 47.686 1.00 39.74 C
ATOM 16 O2 C A 438 39.669 124.360 48.348 1.00 39.42 O
ATOM 17 N3 C A 438 38.309 125.392 46.857 1.00 40.55 N
ATOM 18 C4 C A 438 37.174 125.365 46.159 1.00 39.67 C
ATOM 19 N4 C A 438 36.902 126.401 45.374 1.00 41.16 N
ATOM 20 C5 C A 438 36.267 124.276 46.242 1.00 40.00 C
ATOM 21 C6 C A 438 36.586 123.269 47.067 1.00 40.31 C
ATOM 22 P C A 439 34.983 122.683 52.416 1.00 36.43 P
ATOM 23 OP1 C A 439 34.666 122.039 53.719 1.00 36.56 O
ATOM 24 OP2 C A 439 33.880 123.117 51.532 1.00 39.06 O
ATOM 25 O5' C A 439 35.922 123.940 52.684 1.00 37.31 O
TER
ATOM 1 O3' A B 435 33.410 123.430 37.004 1.00 37.28 O
ATOM 2 P G B 436 32.593 123.766 38.346 1.00 37.71 P
ATOM 3 OP1 G B 436 31.234 123.204 38.151 1.00 38.41 O
ATOM 4 OP2 G B 436 32.747 125.210 38.656 1.00 35.31 O
ATOM 5 O5' G B 436 33.324 122.899 39.469 1.00 37.94 O
ATOM 6 C5' G B 436 33.599 121.490 39.269 1.00 37.11 C
ATOM 7 C4' G B 436 34.348 120.916 40.458 1.00 36.85 C
ATOM 8 O4' G B 436 35.599 121.635 40.622 1.00 40.03 O
ATOM 9 C3' G B 436 33.645 121.000 41.809 1.00 34.80 C
ATOM 10 O3' G B 436 34.123 119.946 42.652 1.00 33.18 O
ATOM 11 C2' G B 436 34.174 122.316 42.359 1.00 34.91 C
ATOM 12 O2' G B 436 34.109 122.365 43.765 1.00 34.70 O
ATOM 13 C1' G B 436 35.628 122.259 41.893 1.00 39.05 C
ATOM 14 N9 G B 436 36.287 123.554 41.749 1.00 41.28 N
ATOM 15 C8 G B 436 35.939 124.562 40.885 1.00 42.87 C
ATOM 16 N7 G B 436 36.719 125.604 40.968 1.00 45.19 N
ATOM 17 C5 G B 436 37.642 125.267 41.950 1.00 43.84 C
ATOM 18 C6 G B 436 38.737 126.007 42.474 1.00 42.33 C
ATOM 19 O6 G B 436 39.127 127.128 42.157 1.00 40.74 O
ATOM 20 N1 G B 436 39.404 125.302 43.466 1.00 43.59 N
ATOM 21 C2 G B 436 39.068 124.043 43.899 1.00 44.75 C
ATOM 22 N2 G B 436 39.826 123.544 44.887 1.00 43.90 N
ATOM 23 N3 G B 436 38.058 123.331 43.408 1.00 44.09 N
ATOM 24 C4 G B 436 37.389 124.005 42.445 1.00 43.24 C
ATOM 25 P A B 437 33.437 118.492 42.607 1.00 31.01 P
ATOM 26 OP1 A B 437 34.526 117.489 42.479 1.00 27.83 O
ATOM 27 OP2 A B 437 32.357 118.537 41.589 1.00 31.42 O
ATOM 28 O5' A B 437 32.792 118.317 44.053 1.00 28.65 O
TER
Atoms:
C2: (38.621,124.368,47.686)
OP1: (33.113,122.443,46.591)
OP2: (34.500,120.373,46.014)
C4: (37.174,125.365,46.159)
O5': (34.391,121.302,48.327)
C3': (36.332,121.980,50.287)
C1': (38.078,122.193,48.721)
O4': (37.308,121.062,48.363)
C5': (35.107,120.218,48.927)
P: (33.617,121.108,46.956)
O2: (39.669,124.360,48.348)
C4': (36.424,120.712,49.461)
C2': (37.751,122.512,50.183)
O2': (38.638,121.783,51.006)
N1: (37.741,123.291,47.799)
N3: (38.309,125.392,46.857)
N4: (36.902,126.401,45.374)
C6: (36.586,123.269,47.067)
C5: (36.267,124.276,46.242)
O3': (35.941,121.677,51.618)
OP1: (33.113,122.443,46.591)
OP2: (34.500,120.373,46.014)
C4: (37.174,125.365,46.159)
O5': (34.391,121.302,48.327)
C3': (36.332,121.980,50.287)
C1': (38.078,122.193,48.721)
O4': (37.308,121.062,48.363)
C5': (35.107,120.218,48.927)
P: (33.617,121.108,46.956)
O2: (39.669,124.360,48.348)
C4': (36.424,120.712,49.461)
C2': (37.751,122.512,50.183)
O2': (38.638,121.783,51.006)
N1: (37.741,123.291,47.799)
N3: (38.309,125.392,46.857)
N4: (36.902,126.401,45.374)
C6: (36.586,123.269,47.067)
C5: (36.267,124.276,46.242)
O3': (35.941,121.677,51.618)
OP1: (31.234,123.204,38.151)
OP2: (32.747,125.210,38.656)
C3': (33.645,121.000,41.809)
C1': (35.628,122.259,41.893)
C5': (33.599,121.490,39.269)
O6: (39.127,127.128,42.157)
O4': (35.599,121.635,40.622)
C8: (35.939,124.562,40.885)
C2: (39.068,124.043,43.899)
C6: (38.737,126.007,42.474)
C5: (37.642,125.267,41.950)
C4: (37.389,124.005,42.445)
P: (32.593,123.766,38.346)
C4': (34.348,120.916,40.458)
C2': (34.174,122.316,42.359)
O2': (34.109,122.365,43.765)
N1: (39.404,125.302,43.466)
N2: (39.826,123.544,44.887)
N3: (38.058,123.331,43.408)
N7: (36.719,125.604,40.968)
N9: (36.287,123.554,41.749)
O5': (33.324,122.899,39.469)
O3': (34.123,119.946,42.652)
OP2: (32.747,125.210,38.656)
C3': (33.645,121.000,41.809)
C1': (35.628,122.259,41.893)
C5': (33.599,121.490,39.269)
O6: (39.127,127.128,42.157)
O4': (35.599,121.635,40.622)
C8: (35.939,124.562,40.885)
C2: (39.068,124.043,43.899)
C6: (38.737,126.007,42.474)
C5: (37.642,125.267,41.950)
C4: (37.389,124.005,42.445)
P: (32.593,123.766,38.346)
C4': (34.348,120.916,40.458)
C2': (34.174,122.316,42.359)
O2': (34.109,122.365,43.765)
N1: (39.404,125.302,43.466)
N2: (39.826,123.544,44.887)
N3: (38.058,123.331,43.408)
N7: (36.719,125.604,40.968)
N9: (36.287,123.554,41.749)
O5': (33.324,122.899,39.469)
O3': (34.123,119.946,42.652)
Image (generated by PyMOL):