Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01312:01310
Extra
PDB:
ATOM 1 O3' A A1311 37.605 118.709 58.988 1.00 57.07 O
ATOM 2 P C A1312 37.931 117.702 60.214 1.00 57.35 P
ATOM 3 OP1 C A1312 38.891 118.358 61.149 1.00 54.81 O
ATOM 4 OP2 C A1312 38.217 116.325 59.695 1.00 56.13 O
ATOM 5 O5' C A1312 36.540 117.658 60.975 1.00 52.08 O
ATOM 6 C5' C A1312 35.773 118.857 61.136 1.00 47.64 C
ATOM 7 C4' C A1312 34.513 118.558 61.888 1.00 43.63 C
ATOM 8 O4' C A1312 33.590 117.856 61.034 1.00 41.37 O
ATOM 9 C3' C A1312 34.712 117.634 63.074 1.00 43.74 C
ATOM 10 O3' C A1312 35.163 118.387 64.196 1.00 41.19 O
ATOM 11 C2' C A1312 33.321 117.050 63.258 1.00 42.78 C
ATOM 12 O2' C A1312 32.465 117.947 63.926 1.00 46.43 O
ATOM 13 C1' C A1312 32.859 116.923 61.804 1.00 41.91 C
ATOM 14 N1 C A1312 33.049 115.584 61.231 1.00 38.68 N
ATOM 15 C2 C A1312 32.213 114.556 61.656 1.00 37.71 C
ATOM 16 O2 C A1312 31.342 114.808 62.499 1.00 38.20 O
ATOM 17 N3 C A1312 32.374 113.314 61.139 1.00 36.66 N
ATOM 18 C4 C A1312 33.324 113.092 60.229 1.00 36.67 C
ATOM 19 N4 C A1312 33.453 111.859 59.742 1.00 33.66 N
ATOM 20 C5 C A1312 34.187 114.128 59.776 1.00 37.62 C
ATOM 21 C6 C A1312 34.017 115.346 60.300 1.00 37.41 C
ATOM 22 P G A1313 35.760 117.643 65.481 1.00 38.77 P
ATOM 23 OP1 G A1313 37.061 118.291 65.759 1.00 39.52 O
ATOM 24 OP2 G A1313 35.699 116.168 65.293 1.00 35.25 O
ATOM 25 O5' G A1313 34.748 118.104 66.615 1.00 35.66 O
TER
ATOM 1 O3' U B1309 34.630 112.067 51.362 1.00 49.82 O
ATOM 2 P G B1310 35.711 111.477 52.413 1.00 52.29 P
ATOM 3 OP1 G B1310 36.935 111.170 51.637 1.00 51.64 O
ATOM 4 OP2 G B1310 35.095 110.415 53.262 1.00 51.22 O
ATOM 5 O5' G B1310 36.036 112.733 53.331 1.00 50.59 O
ATOM 6 C5' G B1310 36.264 114.006 52.725 1.00 49.51 C
ATOM 7 C4' G B1310 36.186 115.102 53.750 1.00 48.92 C
ATOM 8 O4' G B1310 34.836 115.196 54.283 1.00 47.69 O
ATOM 9 C3' G B1310 37.114 114.967 54.946 1.00 47.94 C
ATOM 10 O3' G B1310 37.572 116.269 55.288 1.00 49.89 O
ATOM 11 C2' G B1310 36.180 114.424 56.021 1.00 46.49 C
ATOM 12 O2' G B1310 36.599 114.716 57.338 1.00 48.84 O
ATOM 13 C1' G B1310 34.887 115.164 55.687 1.00 44.25 C
ATOM 14 N9 G B1310 33.682 114.515 56.192 1.00 39.28 N
ATOM 15 C8 G B1310 33.337 113.193 56.079 1.00 39.16 C
ATOM 16 N7 G B1310 32.253 112.892 56.736 1.00 37.19 N
ATOM 17 C5 G B1310 31.848 114.091 57.295 1.00 35.15 C
ATOM 18 C6 G B1310 30.760 114.376 58.149 1.00 34.63 C
ATOM 19 O6 G B1310 29.932 113.595 58.617 1.00 32.45 O
ATOM 20 N1 G B1310 30.703 115.729 58.472 1.00 35.63 N
ATOM 21 C2 G B1310 31.597 116.683 58.036 1.00 37.29 C
ATOM 22 N2 G B1310 31.379 117.948 58.448 1.00 34.58 N
ATOM 23 N3 G B1310 32.630 116.417 57.254 1.00 36.80 N
ATOM 24 C4 G B1310 32.695 115.110 56.931 1.00 36.54 C
ATOM 25 P A B1311 38.859 116.879 54.539 1.00 51.26 P
ATOM 26 OP1 A B1311 38.360 117.856 53.536 1.00 49.50 O
ATOM 27 OP2 A B1311 39.729 115.759 54.094 1.00 49.17 O
ATOM 28 O5' A B1311 39.612 117.687 55.690 1.00 52.98 O
TER
ATOM 2 P C A1312 37.931 117.702 60.214 1.00 57.35 P
ATOM 3 OP1 C A1312 38.891 118.358 61.149 1.00 54.81 O
ATOM 4 OP2 C A1312 38.217 116.325 59.695 1.00 56.13 O
ATOM 5 O5' C A1312 36.540 117.658 60.975 1.00 52.08 O
ATOM 6 C5' C A1312 35.773 118.857 61.136 1.00 47.64 C
ATOM 7 C4' C A1312 34.513 118.558 61.888 1.00 43.63 C
ATOM 8 O4' C A1312 33.590 117.856 61.034 1.00 41.37 O
ATOM 9 C3' C A1312 34.712 117.634 63.074 1.00 43.74 C
ATOM 10 O3' C A1312 35.163 118.387 64.196 1.00 41.19 O
ATOM 11 C2' C A1312 33.321 117.050 63.258 1.00 42.78 C
ATOM 12 O2' C A1312 32.465 117.947 63.926 1.00 46.43 O
ATOM 13 C1' C A1312 32.859 116.923 61.804 1.00 41.91 C
ATOM 14 N1 C A1312 33.049 115.584 61.231 1.00 38.68 N
ATOM 15 C2 C A1312 32.213 114.556 61.656 1.00 37.71 C
ATOM 16 O2 C A1312 31.342 114.808 62.499 1.00 38.20 O
ATOM 17 N3 C A1312 32.374 113.314 61.139 1.00 36.66 N
ATOM 18 C4 C A1312 33.324 113.092 60.229 1.00 36.67 C
ATOM 19 N4 C A1312 33.453 111.859 59.742 1.00 33.66 N
ATOM 20 C5 C A1312 34.187 114.128 59.776 1.00 37.62 C
ATOM 21 C6 C A1312 34.017 115.346 60.300 1.00 37.41 C
ATOM 22 P G A1313 35.760 117.643 65.481 1.00 38.77 P
ATOM 23 OP1 G A1313 37.061 118.291 65.759 1.00 39.52 O
ATOM 24 OP2 G A1313 35.699 116.168 65.293 1.00 35.25 O
ATOM 25 O5' G A1313 34.748 118.104 66.615 1.00 35.66 O
TER
ATOM 1 O3' U B1309 34.630 112.067 51.362 1.00 49.82 O
ATOM 2 P G B1310 35.711 111.477 52.413 1.00 52.29 P
ATOM 3 OP1 G B1310 36.935 111.170 51.637 1.00 51.64 O
ATOM 4 OP2 G B1310 35.095 110.415 53.262 1.00 51.22 O
ATOM 5 O5' G B1310 36.036 112.733 53.331 1.00 50.59 O
ATOM 6 C5' G B1310 36.264 114.006 52.725 1.00 49.51 C
ATOM 7 C4' G B1310 36.186 115.102 53.750 1.00 48.92 C
ATOM 8 O4' G B1310 34.836 115.196 54.283 1.00 47.69 O
ATOM 9 C3' G B1310 37.114 114.967 54.946 1.00 47.94 C
ATOM 10 O3' G B1310 37.572 116.269 55.288 1.00 49.89 O
ATOM 11 C2' G B1310 36.180 114.424 56.021 1.00 46.49 C
ATOM 12 O2' G B1310 36.599 114.716 57.338 1.00 48.84 O
ATOM 13 C1' G B1310 34.887 115.164 55.687 1.00 44.25 C
ATOM 14 N9 G B1310 33.682 114.515 56.192 1.00 39.28 N
ATOM 15 C8 G B1310 33.337 113.193 56.079 1.00 39.16 C
ATOM 16 N7 G B1310 32.253 112.892 56.736 1.00 37.19 N
ATOM 17 C5 G B1310 31.848 114.091 57.295 1.00 35.15 C
ATOM 18 C6 G B1310 30.760 114.376 58.149 1.00 34.63 C
ATOM 19 O6 G B1310 29.932 113.595 58.617 1.00 32.45 O
ATOM 20 N1 G B1310 30.703 115.729 58.472 1.00 35.63 N
ATOM 21 C2 G B1310 31.597 116.683 58.036 1.00 37.29 C
ATOM 22 N2 G B1310 31.379 117.948 58.448 1.00 34.58 N
ATOM 23 N3 G B1310 32.630 116.417 57.254 1.00 36.80 N
ATOM 24 C4 G B1310 32.695 115.110 56.931 1.00 36.54 C
ATOM 25 P A B1311 38.859 116.879 54.539 1.00 51.26 P
ATOM 26 OP1 A B1311 38.360 117.856 53.536 1.00 49.50 O
ATOM 27 OP2 A B1311 39.729 115.759 54.094 1.00 49.17 O
ATOM 28 O5' A B1311 39.612 117.687 55.690 1.00 52.98 O
TER
Atoms:
C2: (32.213,114.556,61.656)
OP1: (38.891,118.358,61.149)
OP2: (38.217,116.325,59.695)
C4: (33.324,113.092,60.229)
O5': (36.540,117.658,60.975)
C3': (34.712,117.634,63.074)
C1': (32.859,116.923,61.804)
O4': (33.590,117.856,61.034)
C5': (35.773,118.857,61.136)
P: (37.931,117.702,60.214)
O2: (31.342,114.808,62.499)
C4': (34.513,118.558,61.888)
C2': (33.321,117.050,63.258)
O2': (32.465,117.947,63.926)
N1: (33.049,115.584,61.231)
N3: (32.374,113.314,61.139)
N4: (33.453,111.859,59.742)
C6: (34.017,115.346,60.300)
C5: (34.187,114.128,59.776)
O3': (35.163,118.387,64.196)
OP1: (38.891,118.358,61.149)
OP2: (38.217,116.325,59.695)
C4: (33.324,113.092,60.229)
O5': (36.540,117.658,60.975)
C3': (34.712,117.634,63.074)
C1': (32.859,116.923,61.804)
O4': (33.590,117.856,61.034)
C5': (35.773,118.857,61.136)
P: (37.931,117.702,60.214)
O2: (31.342,114.808,62.499)
C4': (34.513,118.558,61.888)
C2': (33.321,117.050,63.258)
O2': (32.465,117.947,63.926)
N1: (33.049,115.584,61.231)
N3: (32.374,113.314,61.139)
N4: (33.453,111.859,59.742)
C6: (34.017,115.346,60.300)
C5: (34.187,114.128,59.776)
O3': (35.163,118.387,64.196)
OP1: (36.935,111.170,51.637)
OP2: (35.095,110.415,53.262)
C3': (37.114,114.967,54.946)
C1': (34.887,115.164,55.687)
C5': (36.264,114.006,52.725)
O6: (29.932,113.595,58.617)
O4': (34.836,115.196,54.283)
C8: (33.337,113.193,56.079)
C2: (31.597,116.683,58.036)
C6: (30.760,114.376,58.149)
C5: (31.848,114.091,57.295)
C4: (32.695,115.110,56.931)
P: (35.711,111.477,52.413)
C4': (36.186,115.102,53.750)
C2': (36.180,114.424,56.021)
O2': (36.599,114.716,57.338)
N1: (30.703,115.729,58.472)
N2: (31.379,117.948,58.448)
N3: (32.630,116.417,57.254)
N7: (32.253,112.892,56.736)
N9: (33.682,114.515,56.192)
O5': (36.036,112.733,53.331)
O3': (37.572,116.269,55.288)
OP2: (35.095,110.415,53.262)
C3': (37.114,114.967,54.946)
C1': (34.887,115.164,55.687)
C5': (36.264,114.006,52.725)
O6: (29.932,113.595,58.617)
O4': (34.836,115.196,54.283)
C8: (33.337,113.193,56.079)
C2: (31.597,116.683,58.036)
C6: (30.760,114.376,58.149)
C5: (31.848,114.091,57.295)
C4: (32.695,115.110,56.931)
P: (35.711,111.477,52.413)
C4': (36.186,115.102,53.750)
C2': (36.180,114.424,56.021)
O2': (36.599,114.716,57.338)
N1: (30.703,115.729,58.472)
N2: (31.379,117.948,58.448)
N3: (32.630,116.417,57.254)
N7: (32.253,112.892,56.736)
N9: (33.682,114.515,56.192)
O5': (36.036,112.733,53.331)
O3': (37.572,116.269,55.288)
Image (generated by PyMOL):