Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01312:01310
Extra
PDB:
ATOM 1 O3' A A1311 37.469 118.635 58.738 1.00 54.02 O
ATOM 2 P C A1312 37.776 117.579 59.923 1.00 55.67 P
ATOM 3 OP1 C A1312 38.686 118.212 60.923 1.00 53.13 O
ATOM 4 OP2 C A1312 38.114 116.241 59.363 1.00 55.18 O
ATOM 5 O5' C A1312 36.346 117.480 60.609 1.00 51.22 O
ATOM 6 C5' C A1312 35.552 118.670 60.777 1.00 45.07 C
ATOM 7 C4' C A1312 34.316 118.362 61.567 1.00 40.67 C
ATOM 8 O4' C A1312 33.358 117.674 60.738 1.00 38.77 O
ATOM 9 C3' C A1312 34.539 117.442 62.750 1.00 39.71 C
ATOM 10 O3' C A1312 35.016 118.204 63.855 1.00 37.34 O
ATOM 11 C2' C A1312 33.151 116.856 62.962 1.00 39.39 C
ATOM 12 O2' C A1312 32.298 117.747 63.642 1.00 43.69 O
ATOM 13 C1' C A1312 32.650 116.733 61.521 1.00 38.71 C
ATOM 14 N1 C A1312 32.815 115.400 60.920 1.00 36.89 N
ATOM 15 C2 C A1312 31.982 114.367 61.342 1.00 35.62 C
ATOM 16 O2 C A1312 31.160 114.591 62.240 1.00 35.70 O
ATOM 17 N3 C A1312 32.094 113.149 60.767 1.00 36.54 N
ATOM 18 C4 C A1312 33.001 112.943 59.810 1.00 37.33 C
ATOM 19 N4 C A1312 33.055 111.734 59.243 1.00 35.26 N
ATOM 20 C5 C A1312 33.886 113.972 59.380 1.00 38.47 C
ATOM 21 C6 C A1312 33.758 115.174 59.955 1.00 37.96 C
ATOM 22 P G A1313 35.536 117.472 65.181 1.00 36.02 P
ATOM 23 OP1 G A1313 36.827 118.106 65.545 1.00 33.86 O
ATOM 24 OP2 G A1313 35.468 115.998 65.006 1.00 33.86 O
ATOM 25 O5' G A1313 34.457 117.923 66.259 1.00 34.72 O
TER
ATOM 1 O3' U B1309 34.291 112.069 51.032 1.00 46.27 O
ATOM 2 P G B1310 35.365 111.343 51.992 1.00 47.86 P
ATOM 3 OP1 G B1310 36.494 110.956 51.117 1.00 48.02 O
ATOM 4 OP2 G B1310 34.716 110.323 52.857 1.00 47.68 O
ATOM 5 O5' G B1310 35.862 112.506 52.949 1.00 46.83 O
ATOM 6 C5' G B1310 36.150 113.788 52.410 1.00 45.64 C
ATOM 7 C4' G B1310 36.006 114.844 53.469 1.00 45.53 C
ATOM 8 O4' G B1310 34.644 114.855 53.982 1.00 45.48 O
ATOM 9 C3' G B1310 36.918 114.707 54.678 1.00 43.67 C
ATOM 10 O3' G B1310 37.319 116.013 55.052 1.00 43.76 O
ATOM 11 C2' G B1310 35.986 114.124 55.731 1.00 43.07 C
ATOM 12 O2' G B1310 36.385 114.424 57.053 1.00 45.10 O
ATOM 13 C1' G B1310 34.680 114.834 55.386 1.00 42.54 C
ATOM 14 N9 G B1310 33.479 114.170 55.881 1.00 39.59 N
ATOM 15 C8 G B1310 33.157 112.842 55.773 1.00 39.82 C
ATOM 16 N7 G B1310 32.066 112.530 56.413 1.00 38.78 N
ATOM 17 C5 G B1310 31.632 113.727 56.951 1.00 37.38 C
ATOM 18 C6 G B1310 30.526 114.002 57.776 1.00 38.56 C
ATOM 19 O6 G B1310 29.689 113.211 58.226 1.00 39.02 O
ATOM 20 N1 G B1310 30.452 115.352 58.096 1.00 39.52 N
ATOM 21 C2 G B1310 31.346 116.309 57.685 1.00 39.88 C
ATOM 22 N2 G B1310 31.116 117.559 58.104 1.00 38.74 N
ATOM 23 N3 G B1310 32.392 116.057 56.922 1.00 39.32 N
ATOM 24 C4 G B1310 32.475 114.754 56.600 1.00 37.88 C
ATOM 25 P A B1311 38.545 116.712 54.287 1.00 44.81 P
ATOM 26 OP1 A B1311 37.950 117.608 53.260 1.00 41.54 O
ATOM 27 OP2 A B1311 39.522 115.678 53.872 1.00 43.87 O
ATOM 28 O5' A B1311 39.242 117.588 55.422 1.00 45.97 O
TER
ATOM 2 P C A1312 37.776 117.579 59.923 1.00 55.67 P
ATOM 3 OP1 C A1312 38.686 118.212 60.923 1.00 53.13 O
ATOM 4 OP2 C A1312 38.114 116.241 59.363 1.00 55.18 O
ATOM 5 O5' C A1312 36.346 117.480 60.609 1.00 51.22 O
ATOM 6 C5' C A1312 35.552 118.670 60.777 1.00 45.07 C
ATOM 7 C4' C A1312 34.316 118.362 61.567 1.00 40.67 C
ATOM 8 O4' C A1312 33.358 117.674 60.738 1.00 38.77 O
ATOM 9 C3' C A1312 34.539 117.442 62.750 1.00 39.71 C
ATOM 10 O3' C A1312 35.016 118.204 63.855 1.00 37.34 O
ATOM 11 C2' C A1312 33.151 116.856 62.962 1.00 39.39 C
ATOM 12 O2' C A1312 32.298 117.747 63.642 1.00 43.69 O
ATOM 13 C1' C A1312 32.650 116.733 61.521 1.00 38.71 C
ATOM 14 N1 C A1312 32.815 115.400 60.920 1.00 36.89 N
ATOM 15 C2 C A1312 31.982 114.367 61.342 1.00 35.62 C
ATOM 16 O2 C A1312 31.160 114.591 62.240 1.00 35.70 O
ATOM 17 N3 C A1312 32.094 113.149 60.767 1.00 36.54 N
ATOM 18 C4 C A1312 33.001 112.943 59.810 1.00 37.33 C
ATOM 19 N4 C A1312 33.055 111.734 59.243 1.00 35.26 N
ATOM 20 C5 C A1312 33.886 113.972 59.380 1.00 38.47 C
ATOM 21 C6 C A1312 33.758 115.174 59.955 1.00 37.96 C
ATOM 22 P G A1313 35.536 117.472 65.181 1.00 36.02 P
ATOM 23 OP1 G A1313 36.827 118.106 65.545 1.00 33.86 O
ATOM 24 OP2 G A1313 35.468 115.998 65.006 1.00 33.86 O
ATOM 25 O5' G A1313 34.457 117.923 66.259 1.00 34.72 O
TER
ATOM 1 O3' U B1309 34.291 112.069 51.032 1.00 46.27 O
ATOM 2 P G B1310 35.365 111.343 51.992 1.00 47.86 P
ATOM 3 OP1 G B1310 36.494 110.956 51.117 1.00 48.02 O
ATOM 4 OP2 G B1310 34.716 110.323 52.857 1.00 47.68 O
ATOM 5 O5' G B1310 35.862 112.506 52.949 1.00 46.83 O
ATOM 6 C5' G B1310 36.150 113.788 52.410 1.00 45.64 C
ATOM 7 C4' G B1310 36.006 114.844 53.469 1.00 45.53 C
ATOM 8 O4' G B1310 34.644 114.855 53.982 1.00 45.48 O
ATOM 9 C3' G B1310 36.918 114.707 54.678 1.00 43.67 C
ATOM 10 O3' G B1310 37.319 116.013 55.052 1.00 43.76 O
ATOM 11 C2' G B1310 35.986 114.124 55.731 1.00 43.07 C
ATOM 12 O2' G B1310 36.385 114.424 57.053 1.00 45.10 O
ATOM 13 C1' G B1310 34.680 114.834 55.386 1.00 42.54 C
ATOM 14 N9 G B1310 33.479 114.170 55.881 1.00 39.59 N
ATOM 15 C8 G B1310 33.157 112.842 55.773 1.00 39.82 C
ATOM 16 N7 G B1310 32.066 112.530 56.413 1.00 38.78 N
ATOM 17 C5 G B1310 31.632 113.727 56.951 1.00 37.38 C
ATOM 18 C6 G B1310 30.526 114.002 57.776 1.00 38.56 C
ATOM 19 O6 G B1310 29.689 113.211 58.226 1.00 39.02 O
ATOM 20 N1 G B1310 30.452 115.352 58.096 1.00 39.52 N
ATOM 21 C2 G B1310 31.346 116.309 57.685 1.00 39.88 C
ATOM 22 N2 G B1310 31.116 117.559 58.104 1.00 38.74 N
ATOM 23 N3 G B1310 32.392 116.057 56.922 1.00 39.32 N
ATOM 24 C4 G B1310 32.475 114.754 56.600 1.00 37.88 C
ATOM 25 P A B1311 38.545 116.712 54.287 1.00 44.81 P
ATOM 26 OP1 A B1311 37.950 117.608 53.260 1.00 41.54 O
ATOM 27 OP2 A B1311 39.522 115.678 53.872 1.00 43.87 O
ATOM 28 O5' A B1311 39.242 117.588 55.422 1.00 45.97 O
TER
Atoms:
C2: (31.982,114.367,61.342)
OP1: (38.686,118.212,60.923)
OP2: (38.114,116.241,59.363)
C4: (33.001,112.943,59.810)
O5': (36.346,117.480,60.609)
C3': (34.539,117.442,62.750)
C1': (32.650,116.733,61.521)
O4': (33.358,117.674,60.738)
C5': (35.552,118.670,60.777)
P: (37.776,117.579,59.923)
O2: (31.160,114.591,62.240)
C4': (34.316,118.362,61.567)
C2': (33.151,116.856,62.962)
O2': (32.298,117.747,63.642)
N1: (32.815,115.400,60.920)
N3: (32.094,113.149,60.767)
N4: (33.055,111.734,59.243)
C6: (33.758,115.174,59.955)
C5: (33.886,113.972,59.380)
O3': (35.016,118.204,63.855)
OP1: (38.686,118.212,60.923)
OP2: (38.114,116.241,59.363)
C4: (33.001,112.943,59.810)
O5': (36.346,117.480,60.609)
C3': (34.539,117.442,62.750)
C1': (32.650,116.733,61.521)
O4': (33.358,117.674,60.738)
C5': (35.552,118.670,60.777)
P: (37.776,117.579,59.923)
O2: (31.160,114.591,62.240)
C4': (34.316,118.362,61.567)
C2': (33.151,116.856,62.962)
O2': (32.298,117.747,63.642)
N1: (32.815,115.400,60.920)
N3: (32.094,113.149,60.767)
N4: (33.055,111.734,59.243)
C6: (33.758,115.174,59.955)
C5: (33.886,113.972,59.380)
O3': (35.016,118.204,63.855)
OP1: (36.494,110.956,51.117)
OP2: (34.716,110.323,52.857)
C3': (36.918,114.707,54.678)
C1': (34.680,114.834,55.386)
C5': (36.150,113.788,52.410)
O6: (29.689,113.211,58.226)
O4': (34.644,114.855,53.982)
C8: (33.157,112.842,55.773)
C2: (31.346,116.309,57.685)
C6: (30.526,114.002,57.776)
C5: (31.632,113.727,56.951)
C4: (32.475,114.754,56.600)
P: (35.365,111.343,51.992)
C4': (36.006,114.844,53.469)
C2': (35.986,114.124,55.731)
O2': (36.385,114.424,57.053)
N1: (30.452,115.352,58.096)
N2: (31.116,117.559,58.104)
N3: (32.392,116.057,56.922)
N7: (32.066,112.530,56.413)
N9: (33.479,114.170,55.881)
O5': (35.862,112.506,52.949)
O3': (37.319,116.013,55.052)
OP2: (34.716,110.323,52.857)
C3': (36.918,114.707,54.678)
C1': (34.680,114.834,55.386)
C5': (36.150,113.788,52.410)
O6: (29.689,113.211,58.226)
O4': (34.644,114.855,53.982)
C8: (33.157,112.842,55.773)
C2: (31.346,116.309,57.685)
C6: (30.526,114.002,57.776)
C5: (31.632,113.727,56.951)
C4: (32.475,114.754,56.600)
P: (35.365,111.343,51.992)
C4': (36.006,114.844,53.469)
C2': (35.986,114.124,55.731)
O2': (36.385,114.424,57.053)
N1: (30.452,115.352,58.096)
N2: (31.116,117.559,58.104)
N3: (32.392,116.057,56.922)
N7: (32.066,112.530,56.413)
N9: (33.479,114.170,55.881)
O5': (35.862,112.506,52.949)
O3': (37.319,116.013,55.052)
Image (generated by PyMOL):