Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YLS:D13:D12
Extra
PDB:
ATOM 1 O3' G A 12 50.260 33.505 18.440 1.00 22.28 O
ATOM 2 P C A 13 50.320 34.906 17.720 1.00 22.10 P
ATOM 3 OP1 C A 13 49.065 35.073 16.911 1.00 18.46 O
ATOM 4 OP2 C A 13 51.688 35.007 17.136 1.00 22.78 O
ATOM 5 O5' C A 13 50.340 35.882 18.970 1.00 21.99 O
ATOM 6 C5' C A 13 49.168 36.147 19.706 1.00 23.01 C
ATOM 7 C4' C A 13 49.475 37.179 20.772 1.00 23.31 C
ATOM 8 O4' C A 13 50.279 36.539 21.785 1.00 23.29 O
ATOM 9 C3' C A 13 50.283 38.392 20.325 1.00 23.39 C
ATOM 10 O3' C A 13 49.427 39.437 19.881 1.00 22.58 O
ATOM 11 C2' C A 13 51.034 38.756 21.580 1.00 23.92 C
ATOM 12 O2' C A 13 50.306 39.608 22.426 1.00 27.54 O
ATOM 13 C1' C A 13 51.291 37.389 22.203 1.00 23.17 C
ATOM 14 N1 C A 13 52.512 36.857 21.734 1.00 24.10 N
ATOM 15 C2 C A 13 53.665 37.435 22.209 1.00 25.31 C
ATOM 16 O2 C A 13 53.558 38.338 23.035 1.00 26.07 O
ATOM 17 N3 C A 13 54.861 36.986 21.774 1.00 26.19 N
ATOM 18 C4 C A 13 54.908 36.002 20.889 1.00 26.59 C
ATOM 19 N4 C A 13 56.109 35.606 20.486 1.00 27.70 N
ATOM 20 C5 C A 13 53.725 35.402 20.356 1.00 26.25 C
ATOM 21 C6 C A 13 52.545 35.853 20.805 1.00 25.45 C
ATOM 22 P C A 14 49.801 40.315 18.601 1.00 22.51 P
ATOM 23 OP1 C A 14 48.703 41.242 18.339 1.00 24.66 O
ATOM 24 OP2 C A 14 50.228 39.444 17.488 1.00 22.58 O
ATOM 25 O5' C A 14 51.010 41.164 19.163 1.00 22.42 O
TER
ATOM 1 O3' U B 11 48.454 27.318 16.942 1.00 25.28 O
ATOM 2 P G B 12 49.230 28.356 15.977 1.00 23.73 P
ATOM 3 OP1 G B 12 48.245 29.048 15.143 1.00 23.24 O
ATOM 4 OP2 G B 12 50.433 27.691 15.402 1.00 25.21 O
ATOM 5 O5' G B 12 49.797 29.413 16.989 1.00 24.33 O
ATOM 6 C5' G B 12 48.899 30.379 17.448 1.00 24.09 C
ATOM 7 C4' G B 12 49.631 31.251 18.408 1.00 22.92 C
ATOM 8 O4' G B 12 50.564 30.435 19.154 1.00 22.38 O
ATOM 9 C3' G B 12 50.428 32.327 17.724 1.00 22.50 C
ATOM 10 O3' G B 12 50.260 33.505 18.440 1.00 22.28 O
ATOM 11 C2' G B 12 51.857 31.784 17.725 1.00 22.95 C
ATOM 12 O2' G B 12 52.840 32.821 17.748 1.00 22.86 O
ATOM 13 C1' G B 12 51.874 30.905 18.986 1.00 23.43 C
ATOM 14 N9 G B 12 52.737 29.729 18.911 1.00 24.42 N
ATOM 15 C8 G B 12 52.590 28.660 18.051 1.00 26.17 C
ATOM 16 N7 G B 12 53.516 27.740 18.217 1.00 26.25 N
ATOM 17 C5 G B 12 54.300 28.225 19.246 1.00 24.16 C
ATOM 18 C6 G B 12 55.443 27.660 19.853 1.00 25.47 C
ATOM 19 O6 G B 12 55.995 26.582 19.602 1.00 27.86 O
ATOM 20 N1 G B 12 55.948 28.449 20.876 1.00 25.06 N
ATOM 21 C2 G B 12 55.398 29.648 21.240 1.00 24.40 C
ATOM 22 N2 G B 12 56.003 30.264 22.250 1.00 23.78 N
ATOM 23 N3 G B 12 54.322 30.193 20.675 1.00 23.41 N
ATOM 24 C4 G B 12 53.831 29.436 19.689 1.00 23.14 C
ATOM 25 P C B 13 50.320 34.906 17.720 1.00 22.10 P
ATOM 26 OP1 C B 13 49.065 35.073 16.911 1.00 18.46 O
ATOM 27 OP2 C B 13 51.688 35.007 17.136 1.00 22.78 O
ATOM 28 O5' C B 13 50.340 35.882 18.970 1.00 21.99 O
TER
ATOM 2 P C A 13 50.320 34.906 17.720 1.00 22.10 P
ATOM 3 OP1 C A 13 49.065 35.073 16.911 1.00 18.46 O
ATOM 4 OP2 C A 13 51.688 35.007 17.136 1.00 22.78 O
ATOM 5 O5' C A 13 50.340 35.882 18.970 1.00 21.99 O
ATOM 6 C5' C A 13 49.168 36.147 19.706 1.00 23.01 C
ATOM 7 C4' C A 13 49.475 37.179 20.772 1.00 23.31 C
ATOM 8 O4' C A 13 50.279 36.539 21.785 1.00 23.29 O
ATOM 9 C3' C A 13 50.283 38.392 20.325 1.00 23.39 C
ATOM 10 O3' C A 13 49.427 39.437 19.881 1.00 22.58 O
ATOM 11 C2' C A 13 51.034 38.756 21.580 1.00 23.92 C
ATOM 12 O2' C A 13 50.306 39.608 22.426 1.00 27.54 O
ATOM 13 C1' C A 13 51.291 37.389 22.203 1.00 23.17 C
ATOM 14 N1 C A 13 52.512 36.857 21.734 1.00 24.10 N
ATOM 15 C2 C A 13 53.665 37.435 22.209 1.00 25.31 C
ATOM 16 O2 C A 13 53.558 38.338 23.035 1.00 26.07 O
ATOM 17 N3 C A 13 54.861 36.986 21.774 1.00 26.19 N
ATOM 18 C4 C A 13 54.908 36.002 20.889 1.00 26.59 C
ATOM 19 N4 C A 13 56.109 35.606 20.486 1.00 27.70 N
ATOM 20 C5 C A 13 53.725 35.402 20.356 1.00 26.25 C
ATOM 21 C6 C A 13 52.545 35.853 20.805 1.00 25.45 C
ATOM 22 P C A 14 49.801 40.315 18.601 1.00 22.51 P
ATOM 23 OP1 C A 14 48.703 41.242 18.339 1.00 24.66 O
ATOM 24 OP2 C A 14 50.228 39.444 17.488 1.00 22.58 O
ATOM 25 O5' C A 14 51.010 41.164 19.163 1.00 22.42 O
TER
ATOM 1 O3' U B 11 48.454 27.318 16.942 1.00 25.28 O
ATOM 2 P G B 12 49.230 28.356 15.977 1.00 23.73 P
ATOM 3 OP1 G B 12 48.245 29.048 15.143 1.00 23.24 O
ATOM 4 OP2 G B 12 50.433 27.691 15.402 1.00 25.21 O
ATOM 5 O5' G B 12 49.797 29.413 16.989 1.00 24.33 O
ATOM 6 C5' G B 12 48.899 30.379 17.448 1.00 24.09 C
ATOM 7 C4' G B 12 49.631 31.251 18.408 1.00 22.92 C
ATOM 8 O4' G B 12 50.564 30.435 19.154 1.00 22.38 O
ATOM 9 C3' G B 12 50.428 32.327 17.724 1.00 22.50 C
ATOM 10 O3' G B 12 50.260 33.505 18.440 1.00 22.28 O
ATOM 11 C2' G B 12 51.857 31.784 17.725 1.00 22.95 C
ATOM 12 O2' G B 12 52.840 32.821 17.748 1.00 22.86 O
ATOM 13 C1' G B 12 51.874 30.905 18.986 1.00 23.43 C
ATOM 14 N9 G B 12 52.737 29.729 18.911 1.00 24.42 N
ATOM 15 C8 G B 12 52.590 28.660 18.051 1.00 26.17 C
ATOM 16 N7 G B 12 53.516 27.740 18.217 1.00 26.25 N
ATOM 17 C5 G B 12 54.300 28.225 19.246 1.00 24.16 C
ATOM 18 C6 G B 12 55.443 27.660 19.853 1.00 25.47 C
ATOM 19 O6 G B 12 55.995 26.582 19.602 1.00 27.86 O
ATOM 20 N1 G B 12 55.948 28.449 20.876 1.00 25.06 N
ATOM 21 C2 G B 12 55.398 29.648 21.240 1.00 24.40 C
ATOM 22 N2 G B 12 56.003 30.264 22.250 1.00 23.78 N
ATOM 23 N3 G B 12 54.322 30.193 20.675 1.00 23.41 N
ATOM 24 C4 G B 12 53.831 29.436 19.689 1.00 23.14 C
ATOM 25 P C B 13 50.320 34.906 17.720 1.00 22.10 P
ATOM 26 OP1 C B 13 49.065 35.073 16.911 1.00 18.46 O
ATOM 27 OP2 C B 13 51.688 35.007 17.136 1.00 22.78 O
ATOM 28 O5' C B 13 50.340 35.882 18.970 1.00 21.99 O
TER
Atoms:
C2: (53.665,37.435,22.209)
OP1: (49.065,35.073,16.911)
OP2: (51.688,35.007,17.136)
C4: (54.908,36.002,20.889)
O5': (50.340,35.882,18.970)
C3': (50.283,38.392,20.325)
C1': (51.291,37.389,22.203)
O4': (50.279,36.539,21.785)
C5': (49.168,36.147,19.706)
P: (50.320,34.906,17.720)
O2: (53.558,38.338,23.035)
C4': (49.475,37.179,20.772)
C2': (51.034,38.756,21.580)
O2': (50.306,39.608,22.426)
N1: (52.512,36.857,21.734)
N3: (54.861,36.986,21.774)
N4: (56.109,35.606,20.486)
C6: (52.545,35.853,20.805)
C5: (53.725,35.402,20.356)
O3': (49.427,39.437,19.881)
OP1: (49.065,35.073,16.911)
OP2: (51.688,35.007,17.136)
C4: (54.908,36.002,20.889)
O5': (50.340,35.882,18.970)
C3': (50.283,38.392,20.325)
C1': (51.291,37.389,22.203)
O4': (50.279,36.539,21.785)
C5': (49.168,36.147,19.706)
P: (50.320,34.906,17.720)
O2: (53.558,38.338,23.035)
C4': (49.475,37.179,20.772)
C2': (51.034,38.756,21.580)
O2': (50.306,39.608,22.426)
N1: (52.512,36.857,21.734)
N3: (54.861,36.986,21.774)
N4: (56.109,35.606,20.486)
C6: (52.545,35.853,20.805)
C5: (53.725,35.402,20.356)
O3': (49.427,39.437,19.881)
OP1: (48.245,29.048,15.143)
OP2: (50.433,27.691,15.402)
C3': (50.428,32.327,17.724)
C1': (51.874,30.905,18.986)
C5': (48.899,30.379,17.448)
O6: (55.995,26.582,19.602)
O4': (50.564,30.435,19.154)
C8: (52.590,28.660,18.051)
C2: (55.398,29.648,21.240)
C6: (55.443,27.660,19.853)
C5: (54.300,28.225,19.246)
C4: (53.831,29.436,19.689)
P: (49.230,28.356,15.977)
C4': (49.631,31.251,18.408)
C2': (51.857,31.784,17.725)
O2': (52.840,32.821,17.748)
N1: (55.948,28.449,20.876)
N2: (56.003,30.264,22.250)
N3: (54.322,30.193,20.675)
N7: (53.516,27.740,18.217)
N9: (52.737,29.729,18.911)
O5': (49.797,29.413,16.989)
O3': (50.260,33.505,18.440)
OP2: (50.433,27.691,15.402)
C3': (50.428,32.327,17.724)
C1': (51.874,30.905,18.986)
C5': (48.899,30.379,17.448)
O6: (55.995,26.582,19.602)
O4': (50.564,30.435,19.154)
C8: (52.590,28.660,18.051)
C2: (55.398,29.648,21.240)
C6: (55.443,27.660,19.853)
C5: (54.300,28.225,19.246)
C4: (53.831,29.436,19.689)
P: (49.230,28.356,15.977)
C4': (49.631,31.251,18.408)
C2': (51.857,31.784,17.725)
O2': (52.840,32.821,17.748)
N1: (55.948,28.449,20.876)
N2: (56.003,30.264,22.250)
N3: (54.322,30.193,20.675)
N7: (53.516,27.740,18.217)
N9: (52.737,29.729,18.911)
O5': (49.797,29.413,16.989)
O3': (50.260,33.505,18.440)
Image (generated by PyMOL):