ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQE:A258:A256

Extra

PDB:
ATOM 1 O3' C A 257 126.682 60.559 -27.604 1.00 41.27 O
ATOM 2 P C A 258 127.284 60.015 -28.985 1.00 42.92 P
ATOM 3 OP1 C A 258 128.695 59.667 -28.706 1.00 44.65 O
ATOM 4 OP2 C A 258 126.973 60.945 -30.079 1.00 43.26 O
ATOM 5 O5' C A 258 126.497 58.675 -29.232 1.00 45.84 O
ATOM 6 C5' C A 258 126.787 57.495 -28.456 1.00 49.12 C
ATOM 7 C4' C A 258 125.893 56.362 -28.887 1.00 51.29 C
ATOM 8 O4' C A 258 124.515 56.703 -28.579 1.00 52.50 O
ATOM 9 C3' C A 258 125.906 56.080 -30.379 1.00 52.66 C
ATOM 10 O3' C A 258 126.967 55.207 -30.730 1.00 54.19 O
ATOM 11 C2' C A 258 124.526 55.475 -30.624 1.00 53.15 C
ATOM 12 O2' C A 258 124.469 54.092 -30.323 1.00 54.32 O
ATOM 13 C1' C A 258 123.665 56.238 -29.614 1.00 51.96 C
ATOM 14 N1 C A 258 122.956 57.393 -30.193 1.00 50.31 N
ATOM 15 C2 C A 258 121.728 57.185 -30.820 1.00 50.14 C
ATOM 16 O2 C A 258 121.258 56.046 -30.852 1.00 49.51 O
ATOM 17 N3 C A 258 121.079 58.235 -31.373 1.00 50.77 N
ATOM 18 C4 C A 258 121.613 59.455 -31.312 1.00 49.83 C
ATOM 19 N4 C A 258 120.953 60.457 -31.899 1.00 48.84 N
ATOM 20 C5 C A 258 122.853 59.700 -30.659 1.00 49.90 C
ATOM 21 C6 C A 258 123.487 58.651 -30.123 1.00 49.79 C
ATOM 22 P C A 259 127.455 55.126 -32.262 1.00 56.66 P
ATOM 23 OP1 C A 259 128.587 54.163 -32.314 1.00 56.96 O
ATOM 24 OP2 C A 259 127.637 56.503 -32.785 1.00 58.01 O
ATOM 25 O5' C A 259 126.227 54.471 -33.012 1.00 56.09 O
TER

ATOM 1 O3' G B 255 119.510 65.982 -31.731 1.00 37.15 O
ATOM 2 P G B 256 119.941 64.611 -32.442 1.00 38.63 P
ATOM 3 OP1 G B 256 120.002 64.870 -33.912 1.00 37.93 O
ATOM 4 OP2 G B 256 119.084 63.524 -31.928 1.00 38.71 O
ATOM 5 O5' G B 256 121.402 64.404 -31.866 1.00 40.03 O
ATOM 6 C5' G B 256 122.197 63.263 -32.215 1.00 42.96 C
ATOM 7 C4' G B 256 123.478 63.254 -31.400 1.00 43.42 C
ATOM 8 O4' G B 256 124.330 62.215 -31.936 1.00 44.92 O
ATOM 9 C3' G B 256 124.280 64.542 -31.521 1.00 42.52 C
ATOM 10 O3' G B 256 124.191 65.368 -30.337 1.00 42.49 O
ATOM 11 C2' G B 256 125.577 64.187 -32.254 1.00 42.83 C
ATOM 12 O2' G B 256 126.719 64.053 -31.451 1.00 41.95 O
ATOM 13 C1' G B 256 125.266 62.794 -32.803 1.00 44.38 C
ATOM 14 N9 G B 256 124.711 62.681 -34.146 1.00 45.51 N
ATOM 15 C8 G B 256 123.989 63.605 -34.872 1.00 47.60 C
ATOM 16 N7 G B 256 123.624 63.160 -36.046 1.00 45.84 N
ATOM 17 C5 G B 256 124.139 61.875 -36.088 1.00 46.39 C
ATOM 18 C6 G B 256 124.067 60.907 -37.095 1.00 48.28 C
ATOM 19 O6 G B 256 123.515 60.982 -38.186 1.00 50.59 O
ATOM 20 N1 G B 256 124.727 59.742 -36.730 1.00 50.55 N
ATOM 21 C2 G B 256 125.373 59.541 -35.530 1.00 51.41 C
ATOM 22 N2 G B 256 125.964 58.337 -35.360 1.00 55.83 N
ATOM 23 N3 G B 256 125.438 60.443 -34.574 1.00 46.41 N
ATOM 24 C4 G B 256 124.809 61.574 -34.920 1.00 45.30 C
ATOM 25 P C B 257 125.267 65.269 -29.131 1.00 41.09 P
ATOM 26 OP1 C B 257 124.742 66.232 -28.117 1.00 44.66 O
ATOM 27 OP2 C B 257 126.637 65.417 -29.583 1.00 42.96 O
ATOM 28 O5' C B 257 125.091 63.855 -28.455 1.00 41.33 O
TER

Atoms:
C2: (121.728,57.185,-30.820)
OP1: (128.695,59.667,-28.706)
OP2: (126.973,60.945,-30.079)
C4: (121.613,59.455,-31.312)
O5': (126.497,58.675,-29.232)
C3': (125.906,56.080,-30.379)
C1': (123.665,56.238,-29.614)
O4': (124.515,56.703,-28.579)
C5': (126.787,57.495,-28.456)
P: (127.284,60.015,-28.985)
O2: (121.258,56.046,-30.852)
C4': (125.893,56.362,-28.887)
C2': (124.526,55.475,-30.624)
O2': (124.469,54.092,-30.323)
N1: (122.956,57.393,-30.193)
N3: (121.079,58.235,-31.373)
N4: (120.953,60.457,-31.899)
C6: (123.487,58.651,-30.123)
C5: (122.853,59.700,-30.659)
O3': (126.967,55.207,-30.730)
OP1: (120.002,64.870,-33.912)
OP2: (119.084,63.524,-31.928)
C3': (124.280,64.542,-31.521)
C1': (125.266,62.794,-32.803)
C5': (122.197,63.263,-32.215)
O6: (123.515,60.982,-38.186)
O4': (124.330,62.215,-31.936)
C8: (123.989,63.605,-34.872)
C2: (125.373,59.541,-35.530)
C6: (124.067,60.907,-37.095)
C5: (124.139,61.875,-36.088)
C4: (124.809,61.574,-34.920)
P: (119.941,64.611,-32.442)
C4': (123.478,63.254,-31.400)
C2': (125.577,64.187,-32.254)
O2': (126.719,64.053,-31.451)
N1: (124.727,59.742,-36.730)
N2: (125.964,58.337,-35.360)
N3: (125.438,60.443,-34.574)
N7: (123.624,63.160,-36.046)
N9: (124.711,62.681,-34.146)
O5': (121.402,64.404,-31.866)
O3': (124.191,65.368,-30.337)
Image (generated by PyMOL):
PyMOL image
show in jmol