Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIY:A111:A109
Extra
PDB:
ATOM 1 O3' C A 110 22.448 16.194 2.765 1.00 35.84 O
ATOM 2 P C A 111 23.695 15.688 3.623 1.00 35.48 P
ATOM 3 OP1 C A 111 24.758 15.309 2.660 1.00 35.16 O
ATOM 4 OP2 C A 111 23.213 14.729 4.648 1.00 35.04 O
ATOM 5 O5' C A 111 24.135 17.018 4.399 1.00 34.69 O
ATOM 6 C5' C A 111 24.677 18.135 3.684 1.00 32.98 C
ATOM 7 C4' C A 111 24.878 19.316 4.614 1.00 31.61 C
ATOM 8 O4' C A 111 23.614 19.709 5.200 1.00 31.37 O
ATOM 9 C3' C A 111 25.726 19.011 5.831 1.00 30.73 C
ATOM 10 O3' C A 111 27.091 19.051 5.500 1.00 30.11 O
ATOM 11 C2' C A 111 25.322 20.125 6.781 1.00 30.30 C
ATOM 12 O2' C A 111 25.953 21.348 6.485 1.00 30.40 O
ATOM 13 C1' C A 111 23.826 20.220 6.505 1.00 30.55 C
ATOM 14 N1 C A 111 22.992 19.475 7.520 1.00 30.54 N
ATOM 15 C2 C A 111 22.785 20.042 8.792 1.00 30.91 C
ATOM 16 O2 C A 111 23.284 21.140 9.057 1.00 31.70 O
ATOM 17 N3 C A 111 22.040 19.371 9.710 1.00 30.80 N
ATOM 18 C4 C A 111 21.509 18.185 9.402 1.00 30.33 C
ATOM 19 N4 C A 111 20.783 17.566 10.338 1.00 29.92 N
ATOM 20 C5 C A 111 21.706 17.588 8.118 1.00 30.03 C
ATOM 21 C6 C A 111 22.445 18.258 7.221 1.00 29.95 C
ATOM 22 P U A 112 28.075 18.025 6.227 1.00 29.49 P
ATOM 23 OP1 U A 112 29.397 18.158 5.569 1.00 29.45 O
ATOM 24 OP2 U A 112 27.396 16.715 6.318 1.00 29.28 O
ATOM 25 O5' U A 112 28.165 18.592 7.719 1.00 29.35 O
TER
ATOM 1 O3' U B 108 14.584 11.480 6.599 1.00 44.18 O
ATOM 2 P G B 109 15.261 10.165 7.216 1.00 46.85 P
ATOM 3 OP1 G B 109 15.483 9.235 6.083 1.00 46.46 O
ATOM 4 OP2 G B 109 14.503 9.725 8.409 1.00 47.00 O
ATOM 5 O5' G B 109 16.658 10.707 7.764 1.00 48.12 O
ATOM 6 C5' G B 109 17.754 10.744 6.887 1.00 51.06 C
ATOM 7 C4' G B 109 18.648 11.925 7.208 1.00 52.77 C
ATOM 8 O4' G B 109 19.220 11.713 8.524 1.00 54.32 O
ATOM 9 C3' G B 109 19.798 12.090 6.212 1.00 53.02 C
ATOM 10 O3' G B 109 19.480 13.124 5.224 1.00 50.48 O
ATOM 11 C2' G B 109 21.031 12.341 7.101 1.00 54.58 C
ATOM 12 O2' G B 109 21.357 13.713 7.261 1.00 55.43 O
ATOM 13 C1' G B 109 20.638 11.749 8.467 1.00 55.53 C
ATOM 14 N9 G B 109 21.165 10.420 8.839 1.00 56.80 N
ATOM 15 C8 G B 109 21.820 10.130 10.021 1.00 57.13 C
ATOM 16 N7 G B 109 22.192 8.881 10.133 1.00 57.06 N
ATOM 17 C5 G B 109 21.752 8.290 8.956 1.00 56.66 C
ATOM 18 C6 G B 109 21.869 6.946 8.520 1.00 56.34 C
ATOM 19 O6 G B 109 22.404 6.000 9.110 1.00 56.03 O
ATOM 20 N1 G B 109 21.297 6.746 7.265 1.00 56.46 N
ATOM 21 C2 G B 109 20.680 7.731 6.524 1.00 56.93 C
ATOM 22 N2 G B 109 20.177 7.366 5.334 1.00 57.28 N
ATOM 23 N3 G B 109 20.563 8.994 6.922 1.00 56.66 N
ATOM 24 C4 G B 109 21.115 9.215 8.145 1.00 56.76 C
ATOM 25 P C B 110 18.454 12.795 4.016 1.00 48.99 P
ATOM 26 OP1 C B 110 17.087 13.011 4.548 1.00 48.44 O
ATOM 27 OP2 C B 110 18.845 11.474 3.461 1.00 48.29 O
ATOM 28 O5' C B 110 18.673 13.901 2.874 1.00 45.94 O
TER
ATOM 2 P C A 111 23.695 15.688 3.623 1.00 35.48 P
ATOM 3 OP1 C A 111 24.758 15.309 2.660 1.00 35.16 O
ATOM 4 OP2 C A 111 23.213 14.729 4.648 1.00 35.04 O
ATOM 5 O5' C A 111 24.135 17.018 4.399 1.00 34.69 O
ATOM 6 C5' C A 111 24.677 18.135 3.684 1.00 32.98 C
ATOM 7 C4' C A 111 24.878 19.316 4.614 1.00 31.61 C
ATOM 8 O4' C A 111 23.614 19.709 5.200 1.00 31.37 O
ATOM 9 C3' C A 111 25.726 19.011 5.831 1.00 30.73 C
ATOM 10 O3' C A 111 27.091 19.051 5.500 1.00 30.11 O
ATOM 11 C2' C A 111 25.322 20.125 6.781 1.00 30.30 C
ATOM 12 O2' C A 111 25.953 21.348 6.485 1.00 30.40 O
ATOM 13 C1' C A 111 23.826 20.220 6.505 1.00 30.55 C
ATOM 14 N1 C A 111 22.992 19.475 7.520 1.00 30.54 N
ATOM 15 C2 C A 111 22.785 20.042 8.792 1.00 30.91 C
ATOM 16 O2 C A 111 23.284 21.140 9.057 1.00 31.70 O
ATOM 17 N3 C A 111 22.040 19.371 9.710 1.00 30.80 N
ATOM 18 C4 C A 111 21.509 18.185 9.402 1.00 30.33 C
ATOM 19 N4 C A 111 20.783 17.566 10.338 1.00 29.92 N
ATOM 20 C5 C A 111 21.706 17.588 8.118 1.00 30.03 C
ATOM 21 C6 C A 111 22.445 18.258 7.221 1.00 29.95 C
ATOM 22 P U A 112 28.075 18.025 6.227 1.00 29.49 P
ATOM 23 OP1 U A 112 29.397 18.158 5.569 1.00 29.45 O
ATOM 24 OP2 U A 112 27.396 16.715 6.318 1.00 29.28 O
ATOM 25 O5' U A 112 28.165 18.592 7.719 1.00 29.35 O
TER
ATOM 1 O3' U B 108 14.584 11.480 6.599 1.00 44.18 O
ATOM 2 P G B 109 15.261 10.165 7.216 1.00 46.85 P
ATOM 3 OP1 G B 109 15.483 9.235 6.083 1.00 46.46 O
ATOM 4 OP2 G B 109 14.503 9.725 8.409 1.00 47.00 O
ATOM 5 O5' G B 109 16.658 10.707 7.764 1.00 48.12 O
ATOM 6 C5' G B 109 17.754 10.744 6.887 1.00 51.06 C
ATOM 7 C4' G B 109 18.648 11.925 7.208 1.00 52.77 C
ATOM 8 O4' G B 109 19.220 11.713 8.524 1.00 54.32 O
ATOM 9 C3' G B 109 19.798 12.090 6.212 1.00 53.02 C
ATOM 10 O3' G B 109 19.480 13.124 5.224 1.00 50.48 O
ATOM 11 C2' G B 109 21.031 12.341 7.101 1.00 54.58 C
ATOM 12 O2' G B 109 21.357 13.713 7.261 1.00 55.43 O
ATOM 13 C1' G B 109 20.638 11.749 8.467 1.00 55.53 C
ATOM 14 N9 G B 109 21.165 10.420 8.839 1.00 56.80 N
ATOM 15 C8 G B 109 21.820 10.130 10.021 1.00 57.13 C
ATOM 16 N7 G B 109 22.192 8.881 10.133 1.00 57.06 N
ATOM 17 C5 G B 109 21.752 8.290 8.956 1.00 56.66 C
ATOM 18 C6 G B 109 21.869 6.946 8.520 1.00 56.34 C
ATOM 19 O6 G B 109 22.404 6.000 9.110 1.00 56.03 O
ATOM 20 N1 G B 109 21.297 6.746 7.265 1.00 56.46 N
ATOM 21 C2 G B 109 20.680 7.731 6.524 1.00 56.93 C
ATOM 22 N2 G B 109 20.177 7.366 5.334 1.00 57.28 N
ATOM 23 N3 G B 109 20.563 8.994 6.922 1.00 56.66 N
ATOM 24 C4 G B 109 21.115 9.215 8.145 1.00 56.76 C
ATOM 25 P C B 110 18.454 12.795 4.016 1.00 48.99 P
ATOM 26 OP1 C B 110 17.087 13.011 4.548 1.00 48.44 O
ATOM 27 OP2 C B 110 18.845 11.474 3.461 1.00 48.29 O
ATOM 28 O5' C B 110 18.673 13.901 2.874 1.00 45.94 O
TER
Atoms:
C2: (22.785,20.042,8.792)
OP1: (24.758,15.309,2.660)
OP2: (23.213,14.729,4.648)
C4: (21.509,18.185,9.402)
O5': (24.135,17.018,4.399)
C3': (25.726,19.011,5.831)
C1': (23.826,20.220,6.505)
O4': (23.614,19.709,5.200)
C5': (24.677,18.135,3.684)
P: (23.695,15.688,3.623)
O2: (23.284,21.140,9.057)
C4': (24.878,19.316,4.614)
C2': (25.322,20.125,6.781)
O2': (25.953,21.348,6.485)
N1: (22.992,19.475,7.520)
N3: (22.040,19.371,9.710)
N4: (20.783,17.566,10.338)
C6: (22.445,18.258,7.221)
C5: (21.706,17.588,8.118)
O3': (27.091,19.051,5.500)
OP1: (24.758,15.309,2.660)
OP2: (23.213,14.729,4.648)
C4: (21.509,18.185,9.402)
O5': (24.135,17.018,4.399)
C3': (25.726,19.011,5.831)
C1': (23.826,20.220,6.505)
O4': (23.614,19.709,5.200)
C5': (24.677,18.135,3.684)
P: (23.695,15.688,3.623)
O2: (23.284,21.140,9.057)
C4': (24.878,19.316,4.614)
C2': (25.322,20.125,6.781)
O2': (25.953,21.348,6.485)
N1: (22.992,19.475,7.520)
N3: (22.040,19.371,9.710)
N4: (20.783,17.566,10.338)
C6: (22.445,18.258,7.221)
C5: (21.706,17.588,8.118)
O3': (27.091,19.051,5.500)
OP1: (15.483,9.235,6.083)
OP2: (14.503,9.725,8.409)
C3': (19.798,12.090,6.212)
C1': (20.638,11.749,8.467)
C5': (17.754,10.744,6.887)
O6: (22.404,6.000,9.110)
O4': (19.220,11.713,8.524)
C8: (21.820,10.130,10.021)
C2: (20.680,7.731,6.524)
C6: (21.869,6.946,8.520)
C5: (21.752,8.290,8.956)
C4: (21.115,9.215,8.145)
P: (15.261,10.165,7.216)
C4': (18.648,11.925,7.208)
C2': (21.031,12.341,7.101)
O2': (21.357,13.713,7.261)
N1: (21.297,6.746,7.265)
N2: (20.177,7.366,5.334)
N3: (20.563,8.994,6.922)
N7: (22.192,8.881,10.133)
N9: (21.165,10.420,8.839)
O5': (16.658,10.707,7.764)
O3': (19.480,13.124,5.224)
OP2: (14.503,9.725,8.409)
C3': (19.798,12.090,6.212)
C1': (20.638,11.749,8.467)
C5': (17.754,10.744,6.887)
O6: (22.404,6.000,9.110)
O4': (19.220,11.713,8.524)
C8: (21.820,10.130,10.021)
C2: (20.680,7.731,6.524)
C6: (21.869,6.946,8.520)
C5: (21.752,8.290,8.956)
C4: (21.115,9.215,8.145)
P: (15.261,10.165,7.216)
C4': (18.648,11.925,7.208)
C2': (21.031,12.341,7.101)
O2': (21.357,13.713,7.261)
N1: (21.297,6.746,7.265)
N2: (20.177,7.366,5.334)
N3: (20.563,8.994,6.922)
N7: (22.192,8.881,10.133)
N9: (21.165,10.420,8.839)
O5': (16.658,10.707,7.764)
O3': (19.480,13.124,5.224)
Image (generated by PyMOL):