Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1F:A2563:A2560
Extra
PDB:
ATOM 1 O3' G A2562 -18.493 108.479 173.000 1.00 46.50 O
ATOM 2 P C A2563 -18.687 109.209 171.583 1.00 35.16 P
ATOM 3 OP1 C A2563 -17.694 110.302 171.467 1.00 42.45 O
ATOM 4 OP2 C A2563 -20.124 109.513 171.427 1.00 50.26 O
ATOM 5 O5' C A2563 -18.361 108.056 170.531 1.00 35.18 O
ATOM 6 C5' C A2563 -17.106 107.422 170.480 1.00 33.60 C
ATOM 7 C4' C A2563 -17.252 106.381 169.410 1.00 33.16 C
ATOM 8 O4' C A2563 -18.348 105.538 169.804 1.00 37.17 O
ATOM 9 C3' C A2563 -17.743 106.941 168.092 1.00 31.70 C
ATOM 10 O3' C A2563 -16.664 107.543 167.389 1.00 27.06 O
ATOM 11 C2' C A2563 -18.282 105.665 167.448 1.00 40.61 C
ATOM 12 O2' C A2563 -17.326 104.739 166.982 1.00 33.24 O
ATOM 13 C1' C A2563 -18.955 105.015 168.642 1.00 40.03 C
ATOM 14 N1 C A2563 -20.369 105.348 168.656 1.00 36.21 N
ATOM 15 C2 C A2563 -21.209 104.756 167.704 1.00 43.16 C
ATOM 16 O2 C A2563 -20.733 103.956 166.883 1.00 42.56 O
ATOM 17 N3 C A2563 -22.530 105.072 167.718 1.00 45.30 N
ATOM 18 C4 C A2563 -22.990 105.938 168.623 1.00 47.88 C
ATOM 19 N4 C A2563 -24.295 106.224 168.588 1.00 61.04 N
ATOM 20 C5 C A2563 -22.138 106.549 169.597 1.00 47.91 C
ATOM 21 C6 C A2563 -20.840 106.230 169.578 1.00 41.12 C
ATOM 22 P U A2564 -16.832 108.781 166.365 1.00 21.11 P
ATOM 23 OP1 U A2564 -15.472 109.194 165.953 1.00 30.04 O
ATOM 24 OP2 U A2564 -17.772 109.774 166.968 1.00 33.48 O
ATOM 25 O5' U A2564 -17.483 108.130 165.060 1.00 39.19 O
TER
ATOM 1 O3' C B2559 -27.173 107.643 173.646 1.00 45.24 O
ATOM 2 P G B2560 -27.051 109.148 173.082 1.00 24.67 P
ATOM 3 OP1 G B2560 -26.518 110.033 174.164 1.00 16.12 O
ATOM 4 OP2 G B2560 -28.338 109.466 172.386 1.00 43.51 O
ATOM 5 O5' G B2560 -25.974 108.984 171.909 1.00 24.64 O
ATOM 6 C5' G B2560 -24.731 108.386 172.191 1.00 30.74 C
ATOM 7 C4' G B2560 -23.652 109.187 171.499 1.00 28.71 C
ATOM 8 O4' G B2560 -24.049 109.385 170.120 1.00 29.81 O
ATOM 9 C3' G B2560 -23.494 110.607 172.022 1.00 26.41 C
ATOM 10 O3' G B2560 -22.701 110.642 173.207 1.00 20.01 O
ATOM 11 C2' G B2560 -22.870 111.332 170.821 1.00 30.06 C
ATOM 12 O2' G B2560 -21.466 111.264 170.722 1.00 34.33 O
ATOM 13 C1' G B2560 -23.456 110.579 169.631 1.00 34.29 C
ATOM 14 N9 G B2560 -24.457 111.340 168.895 1.00 28.83 N
ATOM 15 C8 G B2560 -24.425 111.644 167.563 1.00 28.23 C
ATOM 16 N7 G B2560 -25.453 112.329 167.165 1.00 25.17 N
ATOM 17 C5 G B2560 -26.208 112.498 168.313 1.00 22.87 C
ATOM 18 C6 G B2560 -27.443 113.161 168.490 1.00 25.46 C
ATOM 19 O6 G B2560 -28.114 113.744 167.631 1.00 39.34 O
ATOM 20 N1 G B2560 -27.886 113.097 169.809 1.00 21.54 N
ATOM 21 C2 G B2560 -27.210 112.460 170.825 1.00 28.78 C
ATOM 22 N2 G B2560 -27.780 112.495 172.043 1.00 32.46 N
ATOM 23 N3 G B2560 -26.051 111.829 170.660 1.00 37.50 N
ATOM 24 C4 G B2560 -25.611 111.891 169.385 1.00 27.31 C
ATOM 25 P A B2561 -23.067 111.592 174.461 1.00 28.75 P
ATOM 26 OP1 A B2561 -24.286 111.098 175.161 1.00 31.49 O
ATOM 27 OP2 A B2561 -23.005 112.966 173.918 1.00 53.09 O
ATOM 28 O5' A B2561 -21.796 111.456 175.436 1.00 34.27 O
TER
ATOM 2 P C A2563 -18.687 109.209 171.583 1.00 35.16 P
ATOM 3 OP1 C A2563 -17.694 110.302 171.467 1.00 42.45 O
ATOM 4 OP2 C A2563 -20.124 109.513 171.427 1.00 50.26 O
ATOM 5 O5' C A2563 -18.361 108.056 170.531 1.00 35.18 O
ATOM 6 C5' C A2563 -17.106 107.422 170.480 1.00 33.60 C
ATOM 7 C4' C A2563 -17.252 106.381 169.410 1.00 33.16 C
ATOM 8 O4' C A2563 -18.348 105.538 169.804 1.00 37.17 O
ATOM 9 C3' C A2563 -17.743 106.941 168.092 1.00 31.70 C
ATOM 10 O3' C A2563 -16.664 107.543 167.389 1.00 27.06 O
ATOM 11 C2' C A2563 -18.282 105.665 167.448 1.00 40.61 C
ATOM 12 O2' C A2563 -17.326 104.739 166.982 1.00 33.24 O
ATOM 13 C1' C A2563 -18.955 105.015 168.642 1.00 40.03 C
ATOM 14 N1 C A2563 -20.369 105.348 168.656 1.00 36.21 N
ATOM 15 C2 C A2563 -21.209 104.756 167.704 1.00 43.16 C
ATOM 16 O2 C A2563 -20.733 103.956 166.883 1.00 42.56 O
ATOM 17 N3 C A2563 -22.530 105.072 167.718 1.00 45.30 N
ATOM 18 C4 C A2563 -22.990 105.938 168.623 1.00 47.88 C
ATOM 19 N4 C A2563 -24.295 106.224 168.588 1.00 61.04 N
ATOM 20 C5 C A2563 -22.138 106.549 169.597 1.00 47.91 C
ATOM 21 C6 C A2563 -20.840 106.230 169.578 1.00 41.12 C
ATOM 22 P U A2564 -16.832 108.781 166.365 1.00 21.11 P
ATOM 23 OP1 U A2564 -15.472 109.194 165.953 1.00 30.04 O
ATOM 24 OP2 U A2564 -17.772 109.774 166.968 1.00 33.48 O
ATOM 25 O5' U A2564 -17.483 108.130 165.060 1.00 39.19 O
TER
ATOM 1 O3' C B2559 -27.173 107.643 173.646 1.00 45.24 O
ATOM 2 P G B2560 -27.051 109.148 173.082 1.00 24.67 P
ATOM 3 OP1 G B2560 -26.518 110.033 174.164 1.00 16.12 O
ATOM 4 OP2 G B2560 -28.338 109.466 172.386 1.00 43.51 O
ATOM 5 O5' G B2560 -25.974 108.984 171.909 1.00 24.64 O
ATOM 6 C5' G B2560 -24.731 108.386 172.191 1.00 30.74 C
ATOM 7 C4' G B2560 -23.652 109.187 171.499 1.00 28.71 C
ATOM 8 O4' G B2560 -24.049 109.385 170.120 1.00 29.81 O
ATOM 9 C3' G B2560 -23.494 110.607 172.022 1.00 26.41 C
ATOM 10 O3' G B2560 -22.701 110.642 173.207 1.00 20.01 O
ATOM 11 C2' G B2560 -22.870 111.332 170.821 1.00 30.06 C
ATOM 12 O2' G B2560 -21.466 111.264 170.722 1.00 34.33 O
ATOM 13 C1' G B2560 -23.456 110.579 169.631 1.00 34.29 C
ATOM 14 N9 G B2560 -24.457 111.340 168.895 1.00 28.83 N
ATOM 15 C8 G B2560 -24.425 111.644 167.563 1.00 28.23 C
ATOM 16 N7 G B2560 -25.453 112.329 167.165 1.00 25.17 N
ATOM 17 C5 G B2560 -26.208 112.498 168.313 1.00 22.87 C
ATOM 18 C6 G B2560 -27.443 113.161 168.490 1.00 25.46 C
ATOM 19 O6 G B2560 -28.114 113.744 167.631 1.00 39.34 O
ATOM 20 N1 G B2560 -27.886 113.097 169.809 1.00 21.54 N
ATOM 21 C2 G B2560 -27.210 112.460 170.825 1.00 28.78 C
ATOM 22 N2 G B2560 -27.780 112.495 172.043 1.00 32.46 N
ATOM 23 N3 G B2560 -26.051 111.829 170.660 1.00 37.50 N
ATOM 24 C4 G B2560 -25.611 111.891 169.385 1.00 27.31 C
ATOM 25 P A B2561 -23.067 111.592 174.461 1.00 28.75 P
ATOM 26 OP1 A B2561 -24.286 111.098 175.161 1.00 31.49 O
ATOM 27 OP2 A B2561 -23.005 112.966 173.918 1.00 53.09 O
ATOM 28 O5' A B2561 -21.796 111.456 175.436 1.00 34.27 O
TER
Atoms:
C2: (-21.209,104.756,167.704)
OP1: (-17.694,110.302,171.467)
OP2: (-20.124,109.513,171.427)
C4: (-22.990,105.938,168.623)
O5': (-18.361,108.056,170.531)
C3': (-17.743,106.941,168.092)
C1': (-18.955,105.015,168.642)
O4': (-18.348,105.538,169.804)
C5': (-17.106,107.422,170.480)
P: (-18.687,109.209,171.583)
O2: (-20.733,103.956,166.883)
C4': (-17.252,106.381,169.410)
C2': (-18.282,105.665,167.448)
O2': (-17.326,104.739,166.982)
N1: (-20.369,105.348,168.656)
N3: (-22.530,105.072,167.718)
N4: (-24.295,106.224,168.588)
C6: (-20.840,106.230,169.578)
C5: (-22.138,106.549,169.597)
O3': (-16.664,107.543,167.389)
OP1: (-17.694,110.302,171.467)
OP2: (-20.124,109.513,171.427)
C4: (-22.990,105.938,168.623)
O5': (-18.361,108.056,170.531)
C3': (-17.743,106.941,168.092)
C1': (-18.955,105.015,168.642)
O4': (-18.348,105.538,169.804)
C5': (-17.106,107.422,170.480)
P: (-18.687,109.209,171.583)
O2: (-20.733,103.956,166.883)
C4': (-17.252,106.381,169.410)
C2': (-18.282,105.665,167.448)
O2': (-17.326,104.739,166.982)
N1: (-20.369,105.348,168.656)
N3: (-22.530,105.072,167.718)
N4: (-24.295,106.224,168.588)
C6: (-20.840,106.230,169.578)
C5: (-22.138,106.549,169.597)
O3': (-16.664,107.543,167.389)
OP1: (-26.518,110.033,174.164)
OP2: (-28.338,109.466,172.386)
C3': (-23.494,110.607,172.022)
C1': (-23.456,110.579,169.631)
C5': (-24.731,108.386,172.191)
O6: (-28.114,113.744,167.631)
O4': (-24.049,109.385,170.120)
C8: (-24.425,111.644,167.563)
C2: (-27.210,112.460,170.825)
C6: (-27.443,113.161,168.490)
C5: (-26.208,112.498,168.313)
C4: (-25.611,111.891,169.385)
P: (-27.051,109.148,173.082)
C4': (-23.652,109.187,171.499)
C2': (-22.870,111.332,170.821)
O2': (-21.466,111.264,170.722)
N1: (-27.886,113.097,169.809)
N2: (-27.780,112.495,172.043)
N3: (-26.051,111.829,170.660)
N7: (-25.453,112.329,167.165)
N9: (-24.457,111.340,168.895)
O5': (-25.974,108.984,171.909)
O3': (-22.701,110.642,173.207)
OP2: (-28.338,109.466,172.386)
C3': (-23.494,110.607,172.022)
C1': (-23.456,110.579,169.631)
C5': (-24.731,108.386,172.191)
O6: (-28.114,113.744,167.631)
O4': (-24.049,109.385,170.120)
C8: (-24.425,111.644,167.563)
C2: (-27.210,112.460,170.825)
C6: (-27.443,113.161,168.490)
C5: (-26.208,112.498,168.313)
C4: (-25.611,111.891,169.385)
P: (-27.051,109.148,173.082)
C4': (-23.652,109.187,171.499)
C2': (-22.870,111.332,170.821)
O2': (-21.466,111.264,170.722)
N1: (-27.886,113.097,169.809)
N2: (-27.780,112.495,172.043)
N3: (-26.051,111.829,170.660)
N7: (-25.453,112.329,167.165)
N9: (-24.457,111.340,168.895)
O5': (-25.974,108.984,171.909)
O3': (-22.701,110.642,173.207)
Image (generated by PyMOL):