Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GX5:A64:A22
Extra
PDB:
ATOM 1 O3' U A 63 11.428 -14.161 19.441 1.00 36.11 O
ATOM 2 P C A 64 11.516 -13.003 20.537 1.00 40.54 P
ATOM 3 OP1 C A 64 10.137 -12.527 20.778 1.00 45.63 O
ATOM 4 OP2 C A 64 12.592 -12.062 20.145 1.00 42.81 O
ATOM 5 O5' C A 64 11.999 -13.802 21.841 1.00 44.93 O
ATOM 6 C5' C A 64 13.387 -13.987 22.110 1.00 43.09 C
ATOM 7 C4' C A 64 13.610 -15.007 23.216 1.00 42.39 C
ATOM 8 O4' C A 64 12.952 -14.613 24.452 1.00 42.11 O
ATOM 9 C3' C A 64 13.035 -16.370 22.911 1.00 44.66 C
ATOM 10 O3' C A 64 13.970 -17.064 22.120 1.00 46.38 O
ATOM 11 C2' C A 64 12.908 -16.962 24.315 1.00 44.73 C
ATOM 12 O2' C A 64 14.135 -17.411 24.847 1.00 46.12 O
ATOM 13 C1' C A 64 12.430 -15.753 25.107 1.00 40.60 C
ATOM 14 N1 C A 64 10.964 -15.680 25.094 1.00 40.49 N
ATOM 15 C2 C A 64 10.235 -16.505 25.955 1.00 41.77 C
ATOM 16 O2 C A 64 10.839 -17.265 26.718 1.00 41.97 O
ATOM 17 N3 C A 64 8.882 -16.447 25.932 1.00 44.90 N
ATOM 18 C4 C A 64 8.265 -15.618 25.087 1.00 47.39 C
ATOM 19 N4 C A 64 6.926 -15.602 25.108 1.00 47.28 N
ATOM 20 C5 C A 64 8.993 -14.772 24.195 1.00 46.18 C
ATOM 21 C6 C A 64 10.329 -14.835 24.227 1.00 44.24 C
ATOM 22 P C A 65 13.475 -18.220 21.143 1.00 37.35 P
ATOM 23 OP1 C A 65 14.626 -18.631 20.306 1.00 44.37 O
ATOM 24 OP2 C A 65 12.210 -17.787 20.525 1.00 41.19 O
ATOM 25 O5' C A 65 13.136 -19.418 22.123 1.00 34.85 O
TER
ATOM 1 O3' G B 21 1.764 -6.631 24.138 1.00 58.77 O
ATOM 2 P G B 22 1.811 -8.047 23.400 1.00 63.10 P
ATOM 3 OP1 G B 22 1.995 -7.779 21.954 1.00 67.01 O
ATOM 4 OP2 G B 22 0.677 -8.877 23.878 1.00 59.63 O
ATOM 5 O5' G B 22 3.187 -8.672 23.903 1.00 56.95 O
ATOM 6 C5' G B 22 4.352 -8.391 23.152 1.00 56.96 C
ATOM 7 C4' G B 22 5.491 -9.314 23.540 1.00 56.92 C
ATOM 8 O4' G B 22 5.568 -9.387 24.987 1.00 58.97 O
ATOM 9 C3' G B 22 5.344 -10.774 23.139 1.00 53.00 C
ATOM 10 O3' G B 22 5.660 -10.991 21.775 1.00 45.70 O
ATOM 11 C2' G B 22 6.395 -11.394 24.054 1.00 51.78 C
ATOM 12 O2' G B 22 7.710 -11.096 23.644 1.00 48.45 O
ATOM 13 C1' G B 22 6.079 -10.658 25.351 1.00 57.31 C
ATOM 14 N9 G B 22 5.095 -11.384 26.148 1.00 61.74 N
ATOM 15 C8 G B 22 3.729 -11.228 26.182 1.00 66.36 C
ATOM 16 N7 G B 22 3.131 -12.058 26.999 1.00 66.42 N
ATOM 17 C5 G B 22 4.175 -12.805 27.531 1.00 61.88 C
ATOM 18 C6 G B 22 4.156 -13.853 28.469 1.00 61.84 C
ATOM 19 O6 G B 22 3.168 -14.338 29.037 1.00 62.17 O
ATOM 20 N1 G B 22 5.442 -14.336 28.725 1.00 61.36 N
ATOM 21 C2 G B 22 6.602 -13.864 28.152 1.00 56.20 C
ATOM 22 N2 G B 22 7.760 -14.443 28.511 1.00 49.18 N
ATOM 23 N3 G B 22 6.623 -12.877 27.274 1.00 57.20 N
ATOM 24 C4 G B 22 5.382 -12.404 27.018 1.00 59.24 C
ATOM 25 P A B 23 5.406 -12.446 21.163 1.00 67.34 P
ATOM 26 OP1 A B 23 5.021 -13.358 22.261 1.00 73.72 O
ATOM 27 OP2 A B 23 6.541 -12.816 20.290 1.00 65.43 O
ATOM 28 O5' A B 23 4.107 -12.190 20.276 1.00 62.26 O
TER
ATOM 2 P C A 64 11.516 -13.003 20.537 1.00 40.54 P
ATOM 3 OP1 C A 64 10.137 -12.527 20.778 1.00 45.63 O
ATOM 4 OP2 C A 64 12.592 -12.062 20.145 1.00 42.81 O
ATOM 5 O5' C A 64 11.999 -13.802 21.841 1.00 44.93 O
ATOM 6 C5' C A 64 13.387 -13.987 22.110 1.00 43.09 C
ATOM 7 C4' C A 64 13.610 -15.007 23.216 1.00 42.39 C
ATOM 8 O4' C A 64 12.952 -14.613 24.452 1.00 42.11 O
ATOM 9 C3' C A 64 13.035 -16.370 22.911 1.00 44.66 C
ATOM 10 O3' C A 64 13.970 -17.064 22.120 1.00 46.38 O
ATOM 11 C2' C A 64 12.908 -16.962 24.315 1.00 44.73 C
ATOM 12 O2' C A 64 14.135 -17.411 24.847 1.00 46.12 O
ATOM 13 C1' C A 64 12.430 -15.753 25.107 1.00 40.60 C
ATOM 14 N1 C A 64 10.964 -15.680 25.094 1.00 40.49 N
ATOM 15 C2 C A 64 10.235 -16.505 25.955 1.00 41.77 C
ATOM 16 O2 C A 64 10.839 -17.265 26.718 1.00 41.97 O
ATOM 17 N3 C A 64 8.882 -16.447 25.932 1.00 44.90 N
ATOM 18 C4 C A 64 8.265 -15.618 25.087 1.00 47.39 C
ATOM 19 N4 C A 64 6.926 -15.602 25.108 1.00 47.28 N
ATOM 20 C5 C A 64 8.993 -14.772 24.195 1.00 46.18 C
ATOM 21 C6 C A 64 10.329 -14.835 24.227 1.00 44.24 C
ATOM 22 P C A 65 13.475 -18.220 21.143 1.00 37.35 P
ATOM 23 OP1 C A 65 14.626 -18.631 20.306 1.00 44.37 O
ATOM 24 OP2 C A 65 12.210 -17.787 20.525 1.00 41.19 O
ATOM 25 O5' C A 65 13.136 -19.418 22.123 1.00 34.85 O
TER
ATOM 1 O3' G B 21 1.764 -6.631 24.138 1.00 58.77 O
ATOM 2 P G B 22 1.811 -8.047 23.400 1.00 63.10 P
ATOM 3 OP1 G B 22 1.995 -7.779 21.954 1.00 67.01 O
ATOM 4 OP2 G B 22 0.677 -8.877 23.878 1.00 59.63 O
ATOM 5 O5' G B 22 3.187 -8.672 23.903 1.00 56.95 O
ATOM 6 C5' G B 22 4.352 -8.391 23.152 1.00 56.96 C
ATOM 7 C4' G B 22 5.491 -9.314 23.540 1.00 56.92 C
ATOM 8 O4' G B 22 5.568 -9.387 24.987 1.00 58.97 O
ATOM 9 C3' G B 22 5.344 -10.774 23.139 1.00 53.00 C
ATOM 10 O3' G B 22 5.660 -10.991 21.775 1.00 45.70 O
ATOM 11 C2' G B 22 6.395 -11.394 24.054 1.00 51.78 C
ATOM 12 O2' G B 22 7.710 -11.096 23.644 1.00 48.45 O
ATOM 13 C1' G B 22 6.079 -10.658 25.351 1.00 57.31 C
ATOM 14 N9 G B 22 5.095 -11.384 26.148 1.00 61.74 N
ATOM 15 C8 G B 22 3.729 -11.228 26.182 1.00 66.36 C
ATOM 16 N7 G B 22 3.131 -12.058 26.999 1.00 66.42 N
ATOM 17 C5 G B 22 4.175 -12.805 27.531 1.00 61.88 C
ATOM 18 C6 G B 22 4.156 -13.853 28.469 1.00 61.84 C
ATOM 19 O6 G B 22 3.168 -14.338 29.037 1.00 62.17 O
ATOM 20 N1 G B 22 5.442 -14.336 28.725 1.00 61.36 N
ATOM 21 C2 G B 22 6.602 -13.864 28.152 1.00 56.20 C
ATOM 22 N2 G B 22 7.760 -14.443 28.511 1.00 49.18 N
ATOM 23 N3 G B 22 6.623 -12.877 27.274 1.00 57.20 N
ATOM 24 C4 G B 22 5.382 -12.404 27.018 1.00 59.24 C
ATOM 25 P A B 23 5.406 -12.446 21.163 1.00 67.34 P
ATOM 26 OP1 A B 23 5.021 -13.358 22.261 1.00 73.72 O
ATOM 27 OP2 A B 23 6.541 -12.816 20.290 1.00 65.43 O
ATOM 28 O5' A B 23 4.107 -12.190 20.276 1.00 62.26 O
TER
Atoms:
C2: (10.235,-16.505,25.955)
OP1: (10.137,-12.527,20.778)
OP2: (12.592,-12.062,20.145)
C4: (8.265,-15.618,25.087)
O5': (11.999,-13.802,21.841)
C3': (13.035,-16.370,22.911)
C1': (12.430,-15.753,25.107)
O4': (12.952,-14.613,24.452)
C5': (13.387,-13.987,22.110)
P: (11.516,-13.003,20.537)
O2: (10.839,-17.265,26.718)
C4': (13.610,-15.007,23.216)
C2': (12.908,-16.962,24.315)
O2': (14.135,-17.411,24.847)
N1: (10.964,-15.680,25.094)
N3: (8.882,-16.447,25.932)
N4: (6.926,-15.602,25.108)
C6: (10.329,-14.835,24.227)
C5: (8.993,-14.772,24.195)
O3': (13.970,-17.064,22.120)
OP1: (10.137,-12.527,20.778)
OP2: (12.592,-12.062,20.145)
C4: (8.265,-15.618,25.087)
O5': (11.999,-13.802,21.841)
C3': (13.035,-16.370,22.911)
C1': (12.430,-15.753,25.107)
O4': (12.952,-14.613,24.452)
C5': (13.387,-13.987,22.110)
P: (11.516,-13.003,20.537)
O2: (10.839,-17.265,26.718)
C4': (13.610,-15.007,23.216)
C2': (12.908,-16.962,24.315)
O2': (14.135,-17.411,24.847)
N1: (10.964,-15.680,25.094)
N3: (8.882,-16.447,25.932)
N4: (6.926,-15.602,25.108)
C6: (10.329,-14.835,24.227)
C5: (8.993,-14.772,24.195)
O3': (13.970,-17.064,22.120)
OP1: (1.995,-7.779,21.954)
OP2: (0.677,-8.877,23.878)
C3': (5.344,-10.774,23.139)
C1': (6.079,-10.658,25.351)
C5': (4.352,-8.391,23.152)
O6: (3.168,-14.338,29.037)
O4': (5.568,-9.387,24.987)
C8: (3.729,-11.228,26.182)
C2: (6.602,-13.864,28.152)
C6: (4.156,-13.853,28.469)
C5: (4.175,-12.805,27.531)
C4: (5.382,-12.404,27.018)
P: (1.811,-8.047,23.400)
C4': (5.491,-9.314,23.540)
C2': (6.395,-11.394,24.054)
O2': (7.710,-11.096,23.644)
N1: (5.442,-14.336,28.725)
N2: (7.760,-14.443,28.511)
N3: (6.623,-12.877,27.274)
N7: (3.131,-12.058,26.999)
N9: (5.095,-11.384,26.148)
O5': (3.187,-8.672,23.903)
O3': (5.660,-10.991,21.775)
OP2: (0.677,-8.877,23.878)
C3': (5.344,-10.774,23.139)
C1': (6.079,-10.658,25.351)
C5': (4.352,-8.391,23.152)
O6: (3.168,-14.338,29.037)
O4': (5.568,-9.387,24.987)
C8: (3.729,-11.228,26.182)
C2: (6.602,-13.864,28.152)
C6: (4.156,-13.853,28.469)
C5: (4.175,-12.805,27.531)
C4: (5.382,-12.404,27.018)
P: (1.811,-8.047,23.400)
C4': (5.491,-9.314,23.540)
C2': (6.395,-11.394,24.054)
O2': (7.710,-11.096,23.644)
N1: (5.442,-14.336,28.725)
N2: (7.760,-14.443,28.511)
N3: (6.623,-12.877,27.274)
N7: (3.131,-12.058,26.999)
N9: (5.095,-11.384,26.148)
O5': (3.187,-8.672,23.903)
O3': (5.660,-10.991,21.775)
Image (generated by PyMOL):