ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNH:A862:A861

Extra

PDB:
ATOM 1 O3' G A 861 58.781 6.369 1.915 1.00 60.81 O
ATOM 2 P C A 862 58.230 4.878 1.742 1.00 56.75 P
ATOM 3 OP1 C A 862 57.485 4.768 0.460 1.00 55.10 O
ATOM 4 OP2 C A 862 57.569 4.522 3.026 1.00 50.73 O
ATOM 5 O5' C A 862 59.530 3.971 1.627 1.00 61.03 O
ATOM 6 C5' C A 862 59.422 2.562 1.470 1.00 60.44 C
ATOM 7 C4' C A 862 60.527 2.074 0.583 1.00 57.76 C
ATOM 8 O4' C A 862 60.306 2.559 -0.757 1.00 58.72 O
ATOM 9 C3' C A 862 61.895 2.604 0.970 1.00 53.44 C
ATOM 10 O3' C A 862 62.446 1.746 1.940 1.00 54.40 O
ATOM 11 C2' C A 862 62.652 2.580 -0.347 1.00 53.20 C
ATOM 12 O2' C A 862 63.186 1.320 -0.678 1.00 51.89 O
ATOM 13 C1' C A 862 61.541 2.902 -1.344 1.00 54.56 C
ATOM 14 N1 C A 862 61.502 4.327 -1.697 1.00 58.56 N
ATOM 15 C2 C A 862 61.882 4.700 -2.983 1.00 58.33 C
ATOM 16 O2 C A 862 62.223 3.810 -3.790 1.00 55.34 O
ATOM 17 N3 C A 862 61.872 6.012 -3.314 1.00 53.99 N
ATOM 18 C4 C A 862 61.499 6.929 -2.415 1.00 59.79 C
ATOM 19 N4 C A 862 61.502 8.203 -2.783 1.00 66.73 N
ATOM 20 C5 C A 862 61.105 6.573 -1.097 1.00 59.26 C
ATOM 21 C6 C A 862 61.117 5.276 -0.782 1.00 59.88 C
ATOM 22 P A A 863 63.098 2.356 3.270 1.00 57.95 P
ATOM 23 OP1 A A 863 63.132 1.246 4.258 1.00 59.17 O
ATOM 24 OP2 A A 863 62.371 3.602 3.607 1.00 55.91 O
ATOM 25 O5' A A 863 64.595 2.681 2.810 1.00 58.15 O
TER

ATOM 1 O3' C B 860 56.174 8.075 7.039 1.00 53.16 O
ATOM 2 P G B 861 56.175 6.678 6.266 1.00 55.15 P
ATOM 3 OP1 G B 861 54.922 6.603 5.469 1.00 43.80 O
ATOM 4 OP2 G B 861 56.457 5.643 7.295 1.00 53.89 O
ATOM 5 O5' G B 861 57.416 6.803 5.275 1.00 57.18 O
ATOM 6 C5' G B 861 57.539 7.949 4.428 1.00 56.32 C
ATOM 7 C4' G B 861 58.902 7.998 3.770 1.00 60.77 C
ATOM 8 O4' G B 861 59.936 8.257 4.762 1.00 62.43 O
ATOM 9 C3' G B 861 59.368 6.701 3.144 1.00 63.36 C
ATOM 10 O3' G B 861 58.781 6.369 1.915 1.00 60.81 O
ATOM 11 C2' G B 861 60.871 6.873 3.077 1.00 63.99 C
ATOM 12 O2' G B 861 61.284 7.677 1.985 1.00 61.58 O
ATOM 13 C1' G B 861 61.132 7.549 4.419 1.00 62.85 C
ATOM 14 N9 G B 861 61.369 6.503 5.420 1.00 64.70 N
ATOM 15 C8 G B 861 60.482 6.021 6.361 1.00 63.39 C
ATOM 16 N7 G B 861 60.973 5.039 7.074 1.00 60.35 N
ATOM 17 C5 G B 861 62.262 4.868 6.591 1.00 60.34 C
ATOM 18 C6 G B 861 63.272 3.955 6.980 1.00 57.95 C
ATOM 19 O6 G B 861 63.232 3.099 7.871 1.00 52.98 O
ATOM 20 N1 G B 861 64.428 4.117 6.217 1.00 61.61 N
ATOM 21 C2 G B 861 64.593 5.052 5.215 1.00 60.89 C
ATOM 22 N2 G B 861 65.774 5.056 4.588 1.00 58.25 N
ATOM 23 N3 G B 861 63.665 5.919 4.855 1.00 60.53 N
ATOM 24 C4 G B 861 62.530 5.770 5.575 1.00 62.45 C
ATOM 25 P C B 862 58.230 4.878 1.742 1.00 56.75 P
ATOM 26 OP1 C B 862 57.485 4.768 0.460 1.00 55.10 O
ATOM 27 OP2 C B 862 57.569 4.522 3.026 1.00 50.73 O
ATOM 28 O5' C B 862 59.530 3.971 1.627 1.00 61.03 O
TER

Atoms:
C2: (61.882,4.700,-2.983)
OP1: (57.485,4.768,0.460)
OP2: (57.569,4.522,3.026)
C4: (61.499,6.929,-2.415)
O5': (59.530,3.971,1.627)
C3': (61.895,2.604,0.970)
C1': (61.541,2.902,-1.344)
O4': (60.306,2.559,-0.757)
C5': (59.422,2.562,1.470)
P: (58.230,4.878,1.742)
O2: (62.223,3.810,-3.790)
C4': (60.527,2.074,0.583)
C2': (62.652,2.580,-0.347)
O2': (63.186,1.320,-0.678)
N1: (61.502,4.327,-1.697)
N3: (61.872,6.012,-3.314)
N4: (61.502,8.203,-2.783)
C6: (61.117,5.276,-0.782)
C5: (61.105,6.573,-1.097)
O3': (62.446,1.746,1.940)
OP1: (54.922,6.603,5.469)
OP2: (56.457,5.643,7.295)
C3': (59.368,6.701,3.144)
C1': (61.132,7.549,4.419)
C5': (57.539,7.949,4.428)
O6: (63.232,3.099,7.871)
O4': (59.936,8.257,4.762)
C8: (60.482,6.021,6.361)
C2: (64.593,5.052,5.215)
C6: (63.272,3.955,6.980)
C5: (62.262,4.868,6.591)
C4: (62.530,5.770,5.575)
P: (56.175,6.678,6.266)
C4': (58.902,7.998,3.770)
C2': (60.871,6.873,3.077)
O2': (61.284,7.677,1.985)
N1: (64.428,4.117,6.217)
N2: (65.774,5.056,4.588)
N3: (63.665,5.919,4.855)
N7: (60.973,5.039,7.074)
N9: (61.369,6.503,5.420)
O5': (57.416,6.803,5.275)
O3': (58.781,6.369,1.915)
Image (generated by PyMOL):
PyMOL image
show in jmol