ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3NPQ:B15:B14

Extra

PDB:
ATOM 1 O3' G A 14 44.090 6.087 5.173 1.00 36.42 O
ATOM 2 P C A 15 45.605 5.923 5.658 1.00 41.64 P
ATOM 3 OP1 C A 15 46.400 5.457 4.501 1.00 53.31 O
ATOM 4 OP2 C A 15 45.598 5.137 6.912 1.00 45.87 O
ATOM 5 O5' C A 15 46.035 7.421 6.013 1.00 44.45 O
ATOM 6 C5' C A 15 46.528 8.281 4.994 1.00 41.95 C
ATOM 7 C4' C A 15 46.369 9.735 5.396 1.00 44.65 C
ATOM 8 O4' C A 15 45.033 10.188 5.064 1.00 50.69 O
ATOM 9 C3' C A 15 46.503 10.013 6.886 1.00 46.47 C
ATOM 10 O3' C A 15 47.867 10.157 7.259 1.00 45.27 O
ATOM 11 C2' C A 15 45.753 11.334 7.001 1.00 49.02 C
ATOM 12 O2' C A 15 46.522 12.431 6.550 1.00 50.34 O
ATOM 13 C1' C A 15 44.580 11.090 6.057 1.00 47.75 C
ATOM 14 N1 C A 15 43.393 10.503 6.741 1.00 40.99 N
ATOM 15 C2 C A 15 42.575 11.329 7.516 1.00 39.12 C
ATOM 16 O2 C A 15 42.855 12.529 7.614 1.00 41.22 O
ATOM 17 N3 C A 15 41.498 10.790 8.137 1.00 39.73 N
ATOM 18 C4 C A 15 41.232 9.490 8.004 1.00 37.35 C
ATOM 19 N4 C A 15 40.159 9.007 8.636 1.00 38.78 N
ATOM 20 C5 C A 15 42.055 8.631 7.218 1.00 38.02 C
ATOM 21 C6 C A 15 43.115 9.174 6.611 1.00 42.89 C
ATOM 22 P A A 16 48.342 9.672 8.708 1.00 41.20 P
ATOM 23 OP1 A A 16 49.802 9.894 8.802 1.00 54.60 O
ATOM 24 OP2 A A 16 47.787 8.320 8.939 1.00 43.32 O
ATOM 25 O5' A A 16 47.600 10.686 9.700 1.00 46.83 O
TER

ATOM 1 O3' U B 13 40.852 1.903 1.436 1.00 43.32 O
ATOM 2 P G B 14 41.491 1.321 2.782 1.00 38.58 P
ATOM 3 OP1 G B 14 42.673 0.510 2.413 1.00 45.57 O
ATOM 4 OP2 G B 14 40.401 0.718 3.580 1.00 38.17 O
ATOM 5 O5' G B 14 41.981 2.640 3.540 1.00 36.61 O
ATOM 6 C5' G B 14 42.745 3.618 2.846 1.00 34.46 C
ATOM 7 C4' G B 14 42.688 4.947 3.576 1.00 33.28 C
ATOM 8 O4' G B 14 41.304 5.351 3.734 1.00 40.04 O
ATOM 9 C3' G B 14 43.298 4.924 4.972 1.00 35.00 C
ATOM 10 O3' G B 14 44.090 6.087 5.173 1.00 36.42 O
ATOM 11 C2' G B 14 42.092 4.885 5.907 1.00 34.57 C
ATOM 12 O2' G B 14 42.325 5.584 7.113 1.00 36.56 O
ATOM 13 C1' G B 14 41.009 5.589 5.096 1.00 37.32 C
ATOM 14 N9 G B 14 39.670 5.079 5.378 1.00 34.49 N
ATOM 15 C8 G B 14 39.179 3.836 5.061 1.00 36.36 C
ATOM 16 N7 G B 14 37.944 3.652 5.437 1.00 36.26 N
ATOM 17 C5 G B 14 37.592 4.850 6.044 1.00 36.57 C
ATOM 18 C6 G B 14 36.372 5.241 6.645 1.00 35.87 C
ATOM 19 O6 G B 14 35.327 4.586 6.764 1.00 42.01 O
ATOM 20 N1 G B 14 36.437 6.541 7.141 1.00 33.42 N
ATOM 21 C2 G B 14 37.540 7.356 7.065 1.00 35.14 C
ATOM 22 N2 G B 14 37.410 8.578 7.599 1.00 33.90 N
ATOM 23 N3 G B 14 38.690 7.002 6.504 1.00 40.58 N
ATOM 24 C4 G B 14 38.644 5.739 6.017 1.00 37.53 C
ATOM 25 P C B 15 45.605 5.923 5.658 1.00 41.64 P
ATOM 26 OP1 C B 15 46.400 5.457 4.501 1.00 53.31 O
ATOM 27 OP2 C B 15 45.598 5.137 6.912 1.00 45.87 O
ATOM 28 O5' C B 15 46.035 7.421 6.013 1.00 44.45 O
TER

Atoms:
C2: (42.575,11.329,7.516)
OP1: (46.400,5.457,4.501)
OP2: (45.598,5.137,6.912)
C4: (41.232,9.490,8.004)
O5': (46.035,7.421,6.013)
C3': (46.503,10.013,6.886)
C1': (44.580,11.090,6.057)
O4': (45.033,10.188,5.064)
C5': (46.528,8.281,4.994)
P: (45.605,5.923,5.658)
O2: (42.855,12.529,7.614)
C4': (46.369,9.735,5.396)
C2': (45.753,11.334,7.001)
O2': (46.522,12.431,6.550)
N1: (43.393,10.503,6.741)
N3: (41.498,10.790,8.137)
N4: (40.159,9.007,8.636)
C6: (43.115,9.174,6.611)
C5: (42.055,8.631,7.218)
O3': (47.867,10.157,7.259)
OP1: (42.673,0.510,2.413)
OP2: (40.401,0.718,3.580)
C3': (43.298,4.924,4.972)
C1': (41.009,5.589,5.096)
C5': (42.745,3.618,2.846)
O6: (35.327,4.586,6.764)
O4': (41.304,5.351,3.734)
C8: (39.179,3.836,5.061)
C2: (37.540,7.356,7.065)
C6: (36.372,5.241,6.645)
C5: (37.592,4.850,6.044)
C4: (38.644,5.739,6.017)
P: (41.491,1.321,2.782)
C4': (42.688,4.947,3.576)
C2': (42.092,4.885,5.907)
O2': (42.325,5.584,7.113)
N1: (36.437,6.541,7.141)
N2: (37.410,8.578,7.599)
N3: (38.690,7.002,6.504)
N7: (37.944,3.652,5.437)
N9: (39.670,5.079,5.378)
O5': (41.981,2.640,3.540)
O3': (44.090,6.087,5.173)
Image (generated by PyMOL):
PyMOL image
show in jmol