Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OH5:A2409:A2406
Extra
PDB:
ATOM 1 O3' G A2408 70.649 -61.759 6.892 1.00 33.46 O
ATOM 2 P C A2409 70.787 -60.390 6.073 1.00 29.89 P
ATOM 3 OP1 C A2409 69.738 -60.397 5.035 1.00 33.85 O
ATOM 4 OP2 C A2409 72.202 -60.261 5.653 1.00 31.63 O
ATOM 5 O5' C A2409 70.453 -59.296 7.174 1.00 31.19 O
ATOM 6 C5' C A2409 69.146 -59.163 7.689 1.00 23.21 C
ATOM 7 C4' C A2409 69.074 -58.067 8.699 1.00 26.87 C
ATOM 8 O4' C A2409 70.013 -58.350 9.757 1.00 38.33 O
ATOM 9 C3' C A2409 69.497 -56.695 8.217 1.00 26.19 C
ATOM 10 O3' C A2409 68.513 -56.012 7.466 1.00 21.54 O
ATOM 11 C2' C A2409 69.883 -56.002 9.514 1.00 35.23 C
ATOM 12 O2' C A2409 68.734 -55.618 10.264 1.00 31.72 O
ATOM 13 C1' C A2409 70.573 -57.146 10.242 1.00 40.15 C
ATOM 14 N1 C A2409 72.012 -57.153 9.964 1.00 32.41 N
ATOM 15 C2 C A2409 72.829 -56.305 10.712 1.00 33.72 C
ATOM 16 O2 C A2409 72.319 -55.633 11.623 1.00 36.30 O
ATOM 17 N3 C A2409 74.150 -56.275 10.455 1.00 33.12 N
ATOM 18 C4 C A2409 74.619 -57.044 9.479 1.00 30.78 C
ATOM 19 N4 C A2409 75.924 -57.016 9.215 1.00 33.66 N
ATOM 20 C5 C A2409 73.791 -57.884 8.693 1.00 31.27 C
ATOM 21 C6 C A2409 72.491 -57.908 8.952 1.00 29.19 C
ATOM 22 P U A2410 68.970 -55.169 6.196 1.00 22.35 P
ATOM 23 OP1 U A2410 67.781 -54.899 5.361 1.00 25.99 O
ATOM 24 OP2 U A2410 70.119 -55.910 5.595 1.00 36.96 O
ATOM 25 O5' U A2410 69.474 -53.828 6.843 1.00 28.38 O
TER
ATOM 1 O3' C B2405 79.176 -62.312 7.570 1.00 25.66 O
ATOM 2 P G B2406 79.127 -61.429 6.223 1.00 32.68 P
ATOM 3 OP1 G B2406 78.576 -62.304 5.143 1.00 25.56 O
ATOM 4 OP2 G B2406 80.477 -60.842 6.039 1.00 29.00 O
ATOM 5 O5' G B2406 78.080 -60.271 6.595 1.00 27.31 O
ATOM 6 C5' G B2406 76.753 -60.584 7.062 1.00 33.37 C
ATOM 7 C4' G B2406 75.684 -60.033 6.133 1.00 32.01 C
ATOM 8 O4' G B2406 75.940 -58.636 5.881 1.00 30.25 O
ATOM 9 C3' G B2406 75.636 -60.661 4.748 1.00 30.52 C
ATOM 10 O3' G B2406 74.864 -61.844 4.718 1.00 25.31 O
ATOM 11 C2' G B2406 75.105 -59.547 3.841 1.00 26.11 C
ATOM 12 O2' G B2406 73.703 -59.601 3.736 1.00 35.25 O
ATOM 13 C1' G B2406 75.481 -58.276 4.604 1.00 28.83 C
ATOM 14 N9 G B2406 76.513 -57.477 3.919 1.00 28.66 N
ATOM 15 C8 G B2406 76.453 -56.121 3.734 1.00 26.77 C
ATOM 16 N7 G B2406 77.482 -55.666 3.108 1.00 31.26 N
ATOM 17 C5 G B2406 78.276 -56.787 2.857 1.00 31.01 C
ATOM 18 C6 G B2406 79.532 -56.923 2.201 1.00 33.83 C
ATOM 19 O6 G B2406 80.251 -56.064 1.680 1.00 31.43 O
ATOM 20 N1 G B2406 79.961 -58.232 2.181 1.00 36.70 N
ATOM 21 C2 G B2406 79.282 -59.280 2.726 1.00 30.46 C
ATOM 22 N2 G B2406 79.865 -60.481 2.609 1.00 43.05 N
ATOM 23 N3 G B2406 78.133 -59.166 3.348 1.00 27.63 N
ATOM 24 C4 G B2406 77.689 -57.906 3.369 1.00 28.25 C
ATOM 25 P A B2407 75.206 -63.011 3.676 1.00 31.74 P
ATOM 26 OP1 A B2407 76.467 -63.672 4.130 1.00 38.49 O
ATOM 27 OP2 A B2407 75.160 -62.389 2.319 1.00 42.09 O
ATOM 28 O5' A B2407 73.972 -64.003 3.851 1.00 36.32 O
TER
ATOM 2 P C A2409 70.787 -60.390 6.073 1.00 29.89 P
ATOM 3 OP1 C A2409 69.738 -60.397 5.035 1.00 33.85 O
ATOM 4 OP2 C A2409 72.202 -60.261 5.653 1.00 31.63 O
ATOM 5 O5' C A2409 70.453 -59.296 7.174 1.00 31.19 O
ATOM 6 C5' C A2409 69.146 -59.163 7.689 1.00 23.21 C
ATOM 7 C4' C A2409 69.074 -58.067 8.699 1.00 26.87 C
ATOM 8 O4' C A2409 70.013 -58.350 9.757 1.00 38.33 O
ATOM 9 C3' C A2409 69.497 -56.695 8.217 1.00 26.19 C
ATOM 10 O3' C A2409 68.513 -56.012 7.466 1.00 21.54 O
ATOM 11 C2' C A2409 69.883 -56.002 9.514 1.00 35.23 C
ATOM 12 O2' C A2409 68.734 -55.618 10.264 1.00 31.72 O
ATOM 13 C1' C A2409 70.573 -57.146 10.242 1.00 40.15 C
ATOM 14 N1 C A2409 72.012 -57.153 9.964 1.00 32.41 N
ATOM 15 C2 C A2409 72.829 -56.305 10.712 1.00 33.72 C
ATOM 16 O2 C A2409 72.319 -55.633 11.623 1.00 36.30 O
ATOM 17 N3 C A2409 74.150 -56.275 10.455 1.00 33.12 N
ATOM 18 C4 C A2409 74.619 -57.044 9.479 1.00 30.78 C
ATOM 19 N4 C A2409 75.924 -57.016 9.215 1.00 33.66 N
ATOM 20 C5 C A2409 73.791 -57.884 8.693 1.00 31.27 C
ATOM 21 C6 C A2409 72.491 -57.908 8.952 1.00 29.19 C
ATOM 22 P U A2410 68.970 -55.169 6.196 1.00 22.35 P
ATOM 23 OP1 U A2410 67.781 -54.899 5.361 1.00 25.99 O
ATOM 24 OP2 U A2410 70.119 -55.910 5.595 1.00 36.96 O
ATOM 25 O5' U A2410 69.474 -53.828 6.843 1.00 28.38 O
TER
ATOM 1 O3' C B2405 79.176 -62.312 7.570 1.00 25.66 O
ATOM 2 P G B2406 79.127 -61.429 6.223 1.00 32.68 P
ATOM 3 OP1 G B2406 78.576 -62.304 5.143 1.00 25.56 O
ATOM 4 OP2 G B2406 80.477 -60.842 6.039 1.00 29.00 O
ATOM 5 O5' G B2406 78.080 -60.271 6.595 1.00 27.31 O
ATOM 6 C5' G B2406 76.753 -60.584 7.062 1.00 33.37 C
ATOM 7 C4' G B2406 75.684 -60.033 6.133 1.00 32.01 C
ATOM 8 O4' G B2406 75.940 -58.636 5.881 1.00 30.25 O
ATOM 9 C3' G B2406 75.636 -60.661 4.748 1.00 30.52 C
ATOM 10 O3' G B2406 74.864 -61.844 4.718 1.00 25.31 O
ATOM 11 C2' G B2406 75.105 -59.547 3.841 1.00 26.11 C
ATOM 12 O2' G B2406 73.703 -59.601 3.736 1.00 35.25 O
ATOM 13 C1' G B2406 75.481 -58.276 4.604 1.00 28.83 C
ATOM 14 N9 G B2406 76.513 -57.477 3.919 1.00 28.66 N
ATOM 15 C8 G B2406 76.453 -56.121 3.734 1.00 26.77 C
ATOM 16 N7 G B2406 77.482 -55.666 3.108 1.00 31.26 N
ATOM 17 C5 G B2406 78.276 -56.787 2.857 1.00 31.01 C
ATOM 18 C6 G B2406 79.532 -56.923 2.201 1.00 33.83 C
ATOM 19 O6 G B2406 80.251 -56.064 1.680 1.00 31.43 O
ATOM 20 N1 G B2406 79.961 -58.232 2.181 1.00 36.70 N
ATOM 21 C2 G B2406 79.282 -59.280 2.726 1.00 30.46 C
ATOM 22 N2 G B2406 79.865 -60.481 2.609 1.00 43.05 N
ATOM 23 N3 G B2406 78.133 -59.166 3.348 1.00 27.63 N
ATOM 24 C4 G B2406 77.689 -57.906 3.369 1.00 28.25 C
ATOM 25 P A B2407 75.206 -63.011 3.676 1.00 31.74 P
ATOM 26 OP1 A B2407 76.467 -63.672 4.130 1.00 38.49 O
ATOM 27 OP2 A B2407 75.160 -62.389 2.319 1.00 42.09 O
ATOM 28 O5' A B2407 73.972 -64.003 3.851 1.00 36.32 O
TER
Atoms:
C2: (72.829,-56.305,10.712)
OP1: (69.738,-60.397,5.035)
OP2: (72.202,-60.261,5.653)
C4: (74.619,-57.044,9.479)
O5': (70.453,-59.296,7.174)
C3': (69.497,-56.695,8.217)
C1': (70.573,-57.146,10.242)
O4': (70.013,-58.350,9.757)
C5': (69.146,-59.163,7.689)
P: (70.787,-60.390,6.073)
O2: (72.319,-55.633,11.623)
C4': (69.074,-58.067,8.699)
C2': (69.883,-56.002,9.514)
O2': (68.734,-55.618,10.264)
N1: (72.012,-57.153,9.964)
N3: (74.150,-56.275,10.455)
N4: (75.924,-57.016,9.215)
C6: (72.491,-57.908,8.952)
C5: (73.791,-57.884,8.693)
O3': (68.513,-56.012,7.466)
OP1: (69.738,-60.397,5.035)
OP2: (72.202,-60.261,5.653)
C4: (74.619,-57.044,9.479)
O5': (70.453,-59.296,7.174)
C3': (69.497,-56.695,8.217)
C1': (70.573,-57.146,10.242)
O4': (70.013,-58.350,9.757)
C5': (69.146,-59.163,7.689)
P: (70.787,-60.390,6.073)
O2: (72.319,-55.633,11.623)
C4': (69.074,-58.067,8.699)
C2': (69.883,-56.002,9.514)
O2': (68.734,-55.618,10.264)
N1: (72.012,-57.153,9.964)
N3: (74.150,-56.275,10.455)
N4: (75.924,-57.016,9.215)
C6: (72.491,-57.908,8.952)
C5: (73.791,-57.884,8.693)
O3': (68.513,-56.012,7.466)
OP1: (78.576,-62.304,5.143)
OP2: (80.477,-60.842,6.039)
C3': (75.636,-60.661,4.748)
C1': (75.481,-58.276,4.604)
C5': (76.753,-60.584,7.062)
O6: (80.251,-56.064,1.680)
O4': (75.940,-58.636,5.881)
C8: (76.453,-56.121,3.734)
C2: (79.282,-59.280,2.726)
C6: (79.532,-56.923,2.201)
C5: (78.276,-56.787,2.857)
C4: (77.689,-57.906,3.369)
P: (79.127,-61.429,6.223)
C4': (75.684,-60.033,6.133)
C2': (75.105,-59.547,3.841)
O2': (73.703,-59.601,3.736)
N1: (79.961,-58.232,2.181)
N2: (79.865,-60.481,2.609)
N3: (78.133,-59.166,3.348)
N7: (77.482,-55.666,3.108)
N9: (76.513,-57.477,3.919)
O5': (78.080,-60.271,6.595)
O3': (74.864,-61.844,4.718)
OP2: (80.477,-60.842,6.039)
C3': (75.636,-60.661,4.748)
C1': (75.481,-58.276,4.604)
C5': (76.753,-60.584,7.062)
O6: (80.251,-56.064,1.680)
O4': (75.940,-58.636,5.881)
C8: (76.453,-56.121,3.734)
C2: (79.282,-59.280,2.726)
C6: (79.532,-56.923,2.201)
C5: (78.276,-56.787,2.857)
C4: (77.689,-57.906,3.369)
P: (79.127,-61.429,6.223)
C4': (75.684,-60.033,6.133)
C2': (75.105,-59.547,3.841)
O2': (73.703,-59.601,3.736)
N1: (79.961,-58.232,2.181)
N2: (79.865,-60.481,2.609)
N3: (78.133,-59.166,3.348)
N7: (77.482,-55.666,3.108)
N9: (76.513,-57.477,3.919)
O5': (78.080,-60.271,6.595)
O3': (74.864,-61.844,4.718)
Image (generated by PyMOL):