Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A2409:A2406
Extra
PDB:
ATOM 1 O3' G A2408 70.768 -61.408 7.547 1.00 29.47 O
ATOM 2 P C A2409 70.980 -60.364 6.356 1.00 23.70 P
ATOM 3 OP1 C A2409 70.040 -60.755 5.274 1.00 32.29 O
ATOM 4 OP2 C A2409 72.413 -60.310 6.061 1.00 31.70 O
ATOM 5 O5' C A2409 70.532 -58.998 6.998 1.00 31.18 O
ATOM 6 C5' C A2409 69.290 -58.900 7.639 1.00 27.10 C
ATOM 7 C4' C A2409 69.348 -57.936 8.770 1.00 29.09 C
ATOM 8 O4' C A2409 70.371 -58.345 9.686 1.00 30.31 O
ATOM 9 C3' C A2409 69.767 -56.536 8.417 1.00 29.50 C
ATOM 10 O3' C A2409 68.766 -55.784 7.777 1.00 24.24 O
ATOM 11 C2' C A2409 70.191 -55.992 9.762 1.00 32.32 C
ATOM 12 O2' C A2409 69.071 -55.710 10.570 1.00 34.99 O
ATOM 13 C1' C A2409 70.892 -57.203 10.338 1.00 31.34 C
ATOM 14 N1 C A2409 72.321 -57.141 10.099 1.00 31.12 N
ATOM 15 C2 C A2409 73.060 -56.268 10.904 1.00 29.43 C
ATOM 16 O2 C A2409 72.427 -55.632 11.772 1.00 32.17 O
ATOM 17 N3 C A2409 74.398 -56.176 10.724 1.00 25.99 N
ATOM 18 C4 C A2409 74.949 -56.916 9.760 1.00 26.25 C
ATOM 19 N4 C A2409 76.254 -56.843 9.525 1.00 27.15 N
ATOM 20 C5 C A2409 74.200 -57.802 8.944 1.00 29.62 C
ATOM 21 C6 C A2409 72.882 -57.889 9.125 1.00 28.55 C
ATOM 22 P U A2410 69.122 -55.036 6.415 1.00 27.30 P
ATOM 23 OP1 U A2410 67.855 -54.812 5.672 1.00 36.22 O
ATOM 24 OP2 U A2410 70.221 -55.820 5.755 1.00 30.91 O
ATOM 25 O5' U A2410 69.672 -53.663 6.944 1.00 30.33 O
TER
ATOM 1 O3' C B2405 79.547 -62.229 7.698 1.00 26.79 O
ATOM 2 P G B2406 79.350 -61.306 6.387 1.00 34.26 P
ATOM 3 OP1 G B2406 78.618 -62.142 5.359 1.00 25.59 O
ATOM 4 OP2 G B2406 80.680 -60.755 6.039 1.00 28.31 O
ATOM 5 O5' G B2406 78.400 -60.137 6.914 1.00 30.22 O
ATOM 6 C5' G B2406 77.088 -60.428 7.410 1.00 30.19 C
ATOM 7 C4' G B2406 76.018 -59.918 6.477 1.00 24.83 C
ATOM 8 O4' G B2406 76.275 -58.531 6.179 1.00 24.79 O
ATOM 9 C3' G B2406 75.963 -60.590 5.111 1.00 28.60 C
ATOM 10 O3' G B2406 75.191 -61.775 5.100 1.00 23.64 O
ATOM 11 C2' G B2406 75.437 -59.503 4.166 1.00 24.75 C
ATOM 12 O2' G B2406 74.046 -59.600 3.989 1.00 24.83 O
ATOM 13 C1' G B2406 75.754 -58.207 4.914 1.00 26.37 C
ATOM 14 N9 G B2406 76.716 -57.375 4.184 1.00 25.45 N
ATOM 15 C8 G B2406 76.630 -56.047 3.915 1.00 23.95 C
ATOM 16 N7 G B2406 77.614 -55.631 3.192 1.00 26.16 N
ATOM 17 C5 G B2406 78.386 -56.758 2.951 1.00 30.30 C
ATOM 18 C6 G B2406 79.591 -56.927 2.239 1.00 34.64 C
ATOM 19 O6 G B2406 80.259 -56.072 1.642 1.00 39.18 O
ATOM 20 N1 G B2406 80.002 -58.245 2.274 1.00 32.83 N
ATOM 21 C2 G B2406 79.358 -59.258 2.902 1.00 29.40 C
ATOM 22 N2 G B2406 79.907 -60.473 2.835 1.00 51.31 N
ATOM 23 N3 G B2406 78.263 -59.114 3.574 1.00 26.79 N
ATOM 24 C4 G B2406 77.834 -57.846 3.556 1.00 31.24 C
ATOM 25 P A B2407 75.514 -62.930 4.034 1.00 28.36 P
ATOM 26 OP1 A B2407 76.780 -63.582 4.464 1.00 43.30 O
ATOM 27 OP2 A B2407 75.461 -62.309 2.694 1.00 35.45 O
ATOM 28 O5' A B2407 74.283 -63.933 4.212 1.00 30.52 O
TER
ATOM 2 P C A2409 70.980 -60.364 6.356 1.00 23.70 P
ATOM 3 OP1 C A2409 70.040 -60.755 5.274 1.00 32.29 O
ATOM 4 OP2 C A2409 72.413 -60.310 6.061 1.00 31.70 O
ATOM 5 O5' C A2409 70.532 -58.998 6.998 1.00 31.18 O
ATOM 6 C5' C A2409 69.290 -58.900 7.639 1.00 27.10 C
ATOM 7 C4' C A2409 69.348 -57.936 8.770 1.00 29.09 C
ATOM 8 O4' C A2409 70.371 -58.345 9.686 1.00 30.31 O
ATOM 9 C3' C A2409 69.767 -56.536 8.417 1.00 29.50 C
ATOM 10 O3' C A2409 68.766 -55.784 7.777 1.00 24.24 O
ATOM 11 C2' C A2409 70.191 -55.992 9.762 1.00 32.32 C
ATOM 12 O2' C A2409 69.071 -55.710 10.570 1.00 34.99 O
ATOM 13 C1' C A2409 70.892 -57.203 10.338 1.00 31.34 C
ATOM 14 N1 C A2409 72.321 -57.141 10.099 1.00 31.12 N
ATOM 15 C2 C A2409 73.060 -56.268 10.904 1.00 29.43 C
ATOM 16 O2 C A2409 72.427 -55.632 11.772 1.00 32.17 O
ATOM 17 N3 C A2409 74.398 -56.176 10.724 1.00 25.99 N
ATOM 18 C4 C A2409 74.949 -56.916 9.760 1.00 26.25 C
ATOM 19 N4 C A2409 76.254 -56.843 9.525 1.00 27.15 N
ATOM 20 C5 C A2409 74.200 -57.802 8.944 1.00 29.62 C
ATOM 21 C6 C A2409 72.882 -57.889 9.125 1.00 28.55 C
ATOM 22 P U A2410 69.122 -55.036 6.415 1.00 27.30 P
ATOM 23 OP1 U A2410 67.855 -54.812 5.672 1.00 36.22 O
ATOM 24 OP2 U A2410 70.221 -55.820 5.755 1.00 30.91 O
ATOM 25 O5' U A2410 69.672 -53.663 6.944 1.00 30.33 O
TER
ATOM 1 O3' C B2405 79.547 -62.229 7.698 1.00 26.79 O
ATOM 2 P G B2406 79.350 -61.306 6.387 1.00 34.26 P
ATOM 3 OP1 G B2406 78.618 -62.142 5.359 1.00 25.59 O
ATOM 4 OP2 G B2406 80.680 -60.755 6.039 1.00 28.31 O
ATOM 5 O5' G B2406 78.400 -60.137 6.914 1.00 30.22 O
ATOM 6 C5' G B2406 77.088 -60.428 7.410 1.00 30.19 C
ATOM 7 C4' G B2406 76.018 -59.918 6.477 1.00 24.83 C
ATOM 8 O4' G B2406 76.275 -58.531 6.179 1.00 24.79 O
ATOM 9 C3' G B2406 75.963 -60.590 5.111 1.00 28.60 C
ATOM 10 O3' G B2406 75.191 -61.775 5.100 1.00 23.64 O
ATOM 11 C2' G B2406 75.437 -59.503 4.166 1.00 24.75 C
ATOM 12 O2' G B2406 74.046 -59.600 3.989 1.00 24.83 O
ATOM 13 C1' G B2406 75.754 -58.207 4.914 1.00 26.37 C
ATOM 14 N9 G B2406 76.716 -57.375 4.184 1.00 25.45 N
ATOM 15 C8 G B2406 76.630 -56.047 3.915 1.00 23.95 C
ATOM 16 N7 G B2406 77.614 -55.631 3.192 1.00 26.16 N
ATOM 17 C5 G B2406 78.386 -56.758 2.951 1.00 30.30 C
ATOM 18 C6 G B2406 79.591 -56.927 2.239 1.00 34.64 C
ATOM 19 O6 G B2406 80.259 -56.072 1.642 1.00 39.18 O
ATOM 20 N1 G B2406 80.002 -58.245 2.274 1.00 32.83 N
ATOM 21 C2 G B2406 79.358 -59.258 2.902 1.00 29.40 C
ATOM 22 N2 G B2406 79.907 -60.473 2.835 1.00 51.31 N
ATOM 23 N3 G B2406 78.263 -59.114 3.574 1.00 26.79 N
ATOM 24 C4 G B2406 77.834 -57.846 3.556 1.00 31.24 C
ATOM 25 P A B2407 75.514 -62.930 4.034 1.00 28.36 P
ATOM 26 OP1 A B2407 76.780 -63.582 4.464 1.00 43.30 O
ATOM 27 OP2 A B2407 75.461 -62.309 2.694 1.00 35.45 O
ATOM 28 O5' A B2407 74.283 -63.933 4.212 1.00 30.52 O
TER
Atoms:
C2: (73.060,-56.268,10.904)
OP1: (70.040,-60.755,5.274)
OP2: (72.413,-60.310,6.061)
C4: (74.949,-56.916,9.760)
O5': (70.532,-58.998,6.998)
C3': (69.767,-56.536,8.417)
C1': (70.892,-57.203,10.338)
O4': (70.371,-58.345,9.686)
C5': (69.290,-58.900,7.639)
P: (70.980,-60.364,6.356)
O2: (72.427,-55.632,11.772)
C4': (69.348,-57.936,8.770)
C2': (70.191,-55.992,9.762)
O2': (69.071,-55.710,10.570)
N1: (72.321,-57.141,10.099)
N3: (74.398,-56.176,10.724)
N4: (76.254,-56.843,9.525)
C6: (72.882,-57.889,9.125)
C5: (74.200,-57.802,8.944)
O3': (68.766,-55.784,7.777)
OP1: (70.040,-60.755,5.274)
OP2: (72.413,-60.310,6.061)
C4: (74.949,-56.916,9.760)
O5': (70.532,-58.998,6.998)
C3': (69.767,-56.536,8.417)
C1': (70.892,-57.203,10.338)
O4': (70.371,-58.345,9.686)
C5': (69.290,-58.900,7.639)
P: (70.980,-60.364,6.356)
O2: (72.427,-55.632,11.772)
C4': (69.348,-57.936,8.770)
C2': (70.191,-55.992,9.762)
O2': (69.071,-55.710,10.570)
N1: (72.321,-57.141,10.099)
N3: (74.398,-56.176,10.724)
N4: (76.254,-56.843,9.525)
C6: (72.882,-57.889,9.125)
C5: (74.200,-57.802,8.944)
O3': (68.766,-55.784,7.777)
OP1: (78.618,-62.142,5.359)
OP2: (80.680,-60.755,6.039)
C3': (75.963,-60.590,5.111)
C1': (75.754,-58.207,4.914)
C5': (77.088,-60.428,7.410)
O6: (80.259,-56.072,1.642)
O4': (76.275,-58.531,6.179)
C8: (76.630,-56.047,3.915)
C2: (79.358,-59.258,2.902)
C6: (79.591,-56.927,2.239)
C5: (78.386,-56.758,2.951)
C4: (77.834,-57.846,3.556)
P: (79.350,-61.306,6.387)
C4': (76.018,-59.918,6.477)
C2': (75.437,-59.503,4.166)
O2': (74.046,-59.600,3.989)
N1: (80.002,-58.245,2.274)
N2: (79.907,-60.473,2.835)
N3: (78.263,-59.114,3.574)
N7: (77.614,-55.631,3.192)
N9: (76.716,-57.375,4.184)
O5': (78.400,-60.137,6.914)
O3': (75.191,-61.775,5.100)
OP2: (80.680,-60.755,6.039)
C3': (75.963,-60.590,5.111)
C1': (75.754,-58.207,4.914)
C5': (77.088,-60.428,7.410)
O6: (80.259,-56.072,1.642)
O4': (76.275,-58.531,6.179)
C8: (76.630,-56.047,3.915)
C2: (79.358,-59.258,2.902)
C6: (79.591,-56.927,2.239)
C5: (78.386,-56.758,2.951)
C4: (77.834,-57.846,3.556)
P: (79.350,-61.306,6.387)
C4': (76.018,-59.918,6.477)
C2': (75.437,-59.503,4.166)
O2': (74.046,-59.600,3.989)
N1: (80.002,-58.245,2.274)
N2: (79.907,-60.473,2.835)
N3: (78.263,-59.114,3.574)
N7: (77.614,-55.631,3.192)
N9: (76.716,-57.375,4.184)
O5': (78.400,-60.137,6.914)
O3': (75.191,-61.775,5.100)
Image (generated by PyMOL):