Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3SKZ:B9:B31
Extra
PDB:
ATOM 1 O3' A A 8 1.378 8.501 8.173 1.00 76.25 O
ATOM 2 P C A 9 0.367 8.446 6.924 1.00 80.90 P
ATOM 3 OP1 C A 9 0.806 9.493 5.973 1.00 75.79 O
ATOM 4 OP2 C A 9 -1.016 8.502 7.467 1.00 78.80 O
ATOM 5 O5' C A 9 0.642 7.008 6.309 1.00 72.85 O
ATOM 6 C5' C A 9 -0.393 6.273 5.661 1.00 65.52 C
ATOM 7 C4' C A 9 -0.011 4.824 5.513 1.00 63.67 C
ATOM 8 O4' C A 9 1.371 4.757 5.041 1.00 65.41 O
ATOM 9 C3' C A 9 -0.037 4.024 6.815 1.00 59.16 C
ATOM 10 O3' C A 9 -0.235 2.636 6.522 1.00 54.29 O
ATOM 11 C2' C A 9 1.381 4.221 7.318 1.00 62.20 C
ATOM 12 O2' C A 9 1.798 3.277 8.276 1.00 65.60 O
ATOM 13 C1' C A 9 2.159 4.090 6.010 1.00 63.09 C
ATOM 14 N1 C A 9 3.512 4.694 6.034 1.00 57.11 N
ATOM 15 C2 C A 9 4.565 3.790 6.174 1.00 57.47 C
ATOM 16 O2 C A 9 4.272 2.586 6.250 1.00 53.64 O
ATOM 17 N3 C A 9 5.848 4.231 6.216 1.00 61.53 N
ATOM 18 C4 C A 9 6.091 5.543 6.128 1.00 63.98 C
ATOM 19 N4 C A 9 7.368 5.948 6.169 1.00 60.46 N
ATOM 20 C5 C A 9 5.028 6.493 5.991 1.00 65.02 C
ATOM 21 C6 C A 9 3.763 6.034 5.949 1.00 61.27 C
ATOM 22 P A A 10 -1.569 2.136 5.776 1.00 54.86 P
ATOM 23 OP1 A A 10 -2.671 3.001 6.232 1.00 44.34 O
ATOM 24 OP2 A A 10 -1.673 0.666 5.992 1.00 54.84 O
ATOM 25 O5' A A 10 -1.257 2.435 4.246 1.00 67.17 O
TER
ATOM 1 O3' U B 30 11.666 13.344 3.566 1.00 74.67 O
ATOM 2 P G B 31 10.961 13.009 4.975 1.00 80.33 P
ATOM 3 OP1 G B 31 10.521 14.303 5.562 1.00 78.39 O
ATOM 4 OP2 G B 31 11.912 12.164 5.740 1.00 79.01 O
ATOM 5 O5' G B 31 9.689 12.142 4.554 1.00 49.75 O
ATOM 6 C5' G B 31 8.581 12.740 3.885 1.00 61.56 C
ATOM 7 C4' G B 31 7.408 11.793 3.790 1.00 65.14 C
ATOM 8 O4' G B 31 7.719 10.703 2.881 1.00 65.35 O
ATOM 9 C3' G B 31 6.999 11.115 5.090 1.00 68.07 C
ATOM 10 O3' G B 31 6.129 11.922 5.861 1.00 75.14 O
ATOM 11 C2' G B 31 6.364 9.812 4.623 1.00 65.99 C
ATOM 12 O2' G B 31 5.015 10.023 4.235 1.00 63.90 O
ATOM 13 C1' G B 31 7.188 9.491 3.372 1.00 67.30 C
ATOM 14 N9 G B 31 8.314 8.586 3.666 1.00 65.07 N
ATOM 15 C8 G B 31 9.551 8.996 4.108 1.00 63.32 C
ATOM 16 N7 G B 31 10.385 8.013 4.295 1.00 62.30 N
ATOM 17 C5 G B 31 9.655 6.881 3.951 1.00 62.65 C
ATOM 18 C6 G B 31 10.053 5.515 3.954 1.00 60.80 C
ATOM 19 O6 G B 31 11.149 5.025 4.268 1.00 62.52 O
ATOM 20 N1 G B 31 9.019 4.687 3.533 1.00 50.63 N
ATOM 21 C2 G B 31 7.774 5.119 3.178 1.00 50.45 C
ATOM 22 N2 G B 31 6.951 4.130 2.828 1.00 55.01 N
ATOM 23 N3 G B 31 7.375 6.388 3.163 1.00 50.18 N
ATOM 24 C4 G B 31 8.370 7.214 3.553 1.00 59.53 C
ATOM 25 P A B 32 5.928 11.652 7.432 1.00 93.63 P
ATOM 26 OP1 A B 32 6.257 10.226 7.679 1.00 98.46 O
ATOM 27 OP2 A B 32 4.578 12.140 7.781 1.00 85.24 O
ATOM 28 O5' A B 32 7.031 12.587 8.096 1.00 63.84 O
TER
ATOM 2 P C A 9 0.367 8.446 6.924 1.00 80.90 P
ATOM 3 OP1 C A 9 0.806 9.493 5.973 1.00 75.79 O
ATOM 4 OP2 C A 9 -1.016 8.502 7.467 1.00 78.80 O
ATOM 5 O5' C A 9 0.642 7.008 6.309 1.00 72.85 O
ATOM 6 C5' C A 9 -0.393 6.273 5.661 1.00 65.52 C
ATOM 7 C4' C A 9 -0.011 4.824 5.513 1.00 63.67 C
ATOM 8 O4' C A 9 1.371 4.757 5.041 1.00 65.41 O
ATOM 9 C3' C A 9 -0.037 4.024 6.815 1.00 59.16 C
ATOM 10 O3' C A 9 -0.235 2.636 6.522 1.00 54.29 O
ATOM 11 C2' C A 9 1.381 4.221 7.318 1.00 62.20 C
ATOM 12 O2' C A 9 1.798 3.277 8.276 1.00 65.60 O
ATOM 13 C1' C A 9 2.159 4.090 6.010 1.00 63.09 C
ATOM 14 N1 C A 9 3.512 4.694 6.034 1.00 57.11 N
ATOM 15 C2 C A 9 4.565 3.790 6.174 1.00 57.47 C
ATOM 16 O2 C A 9 4.272 2.586 6.250 1.00 53.64 O
ATOM 17 N3 C A 9 5.848 4.231 6.216 1.00 61.53 N
ATOM 18 C4 C A 9 6.091 5.543 6.128 1.00 63.98 C
ATOM 19 N4 C A 9 7.368 5.948 6.169 1.00 60.46 N
ATOM 20 C5 C A 9 5.028 6.493 5.991 1.00 65.02 C
ATOM 21 C6 C A 9 3.763 6.034 5.949 1.00 61.27 C
ATOM 22 P A A 10 -1.569 2.136 5.776 1.00 54.86 P
ATOM 23 OP1 A A 10 -2.671 3.001 6.232 1.00 44.34 O
ATOM 24 OP2 A A 10 -1.673 0.666 5.992 1.00 54.84 O
ATOM 25 O5' A A 10 -1.257 2.435 4.246 1.00 67.17 O
TER
ATOM 1 O3' U B 30 11.666 13.344 3.566 1.00 74.67 O
ATOM 2 P G B 31 10.961 13.009 4.975 1.00 80.33 P
ATOM 3 OP1 G B 31 10.521 14.303 5.562 1.00 78.39 O
ATOM 4 OP2 G B 31 11.912 12.164 5.740 1.00 79.01 O
ATOM 5 O5' G B 31 9.689 12.142 4.554 1.00 49.75 O
ATOM 6 C5' G B 31 8.581 12.740 3.885 1.00 61.56 C
ATOM 7 C4' G B 31 7.408 11.793 3.790 1.00 65.14 C
ATOM 8 O4' G B 31 7.719 10.703 2.881 1.00 65.35 O
ATOM 9 C3' G B 31 6.999 11.115 5.090 1.00 68.07 C
ATOM 10 O3' G B 31 6.129 11.922 5.861 1.00 75.14 O
ATOM 11 C2' G B 31 6.364 9.812 4.623 1.00 65.99 C
ATOM 12 O2' G B 31 5.015 10.023 4.235 1.00 63.90 O
ATOM 13 C1' G B 31 7.188 9.491 3.372 1.00 67.30 C
ATOM 14 N9 G B 31 8.314 8.586 3.666 1.00 65.07 N
ATOM 15 C8 G B 31 9.551 8.996 4.108 1.00 63.32 C
ATOM 16 N7 G B 31 10.385 8.013 4.295 1.00 62.30 N
ATOM 17 C5 G B 31 9.655 6.881 3.951 1.00 62.65 C
ATOM 18 C6 G B 31 10.053 5.515 3.954 1.00 60.80 C
ATOM 19 O6 G B 31 11.149 5.025 4.268 1.00 62.52 O
ATOM 20 N1 G B 31 9.019 4.687 3.533 1.00 50.63 N
ATOM 21 C2 G B 31 7.774 5.119 3.178 1.00 50.45 C
ATOM 22 N2 G B 31 6.951 4.130 2.828 1.00 55.01 N
ATOM 23 N3 G B 31 7.375 6.388 3.163 1.00 50.18 N
ATOM 24 C4 G B 31 8.370 7.214 3.553 1.00 59.53 C
ATOM 25 P A B 32 5.928 11.652 7.432 1.00 93.63 P
ATOM 26 OP1 A B 32 6.257 10.226 7.679 1.00 98.46 O
ATOM 27 OP2 A B 32 4.578 12.140 7.781 1.00 85.24 O
ATOM 28 O5' A B 32 7.031 12.587 8.096 1.00 63.84 O
TER
Atoms:
C2: (4.565,3.790,6.174)
OP1: (0.806,9.493,5.973)
OP2: (-1.016,8.502,7.467)
C4: (6.091,5.543,6.128)
O5': (0.642,7.008,6.309)
C3': (-0.037,4.024,6.815)
C1': (2.159,4.090,6.010)
O4': (1.371,4.757,5.041)
C5': (-0.393,6.273,5.661)
P: (0.367,8.446,6.924)
O2: (4.272,2.586,6.250)
C4': (-0.011,4.824,5.513)
C2': (1.381,4.221,7.318)
O2': (1.798,3.277,8.276)
N1: (3.512,4.694,6.034)
N3: (5.848,4.231,6.216)
N4: (7.368,5.948,6.169)
C6: (3.763,6.034,5.949)
C5: (5.028,6.493,5.991)
O3': (-0.235,2.636,6.522)
OP1: (0.806,9.493,5.973)
OP2: (-1.016,8.502,7.467)
C4: (6.091,5.543,6.128)
O5': (0.642,7.008,6.309)
C3': (-0.037,4.024,6.815)
C1': (2.159,4.090,6.010)
O4': (1.371,4.757,5.041)
C5': (-0.393,6.273,5.661)
P: (0.367,8.446,6.924)
O2: (4.272,2.586,6.250)
C4': (-0.011,4.824,5.513)
C2': (1.381,4.221,7.318)
O2': (1.798,3.277,8.276)
N1: (3.512,4.694,6.034)
N3: (5.848,4.231,6.216)
N4: (7.368,5.948,6.169)
C6: (3.763,6.034,5.949)
C5: (5.028,6.493,5.991)
O3': (-0.235,2.636,6.522)
OP1: (10.521,14.303,5.562)
OP2: (11.912,12.164,5.740)
C3': (6.999,11.115,5.090)
C1': (7.188,9.491,3.372)
C5': (8.581,12.740,3.885)
O6: (11.149,5.025,4.268)
O4': (7.719,10.703,2.881)
C8: (9.551,8.996,4.108)
C2: (7.774,5.119,3.178)
C6: (10.053,5.515,3.954)
C5: (9.655,6.881,3.951)
C4: (8.370,7.214,3.553)
P: (10.961,13.009,4.975)
C4': (7.408,11.793,3.790)
C2': (6.364,9.812,4.623)
O2': (5.015,10.023,4.235)
N1: (9.019,4.687,3.533)
N2: (6.951,4.130,2.828)
N3: (7.375,6.388,3.163)
N7: (10.385,8.013,4.295)
N9: (8.314,8.586,3.666)
O5': (9.689,12.142,4.554)
O3': (6.129,11.922,5.861)
OP2: (11.912,12.164,5.740)
C3': (6.999,11.115,5.090)
C1': (7.188,9.491,3.372)
C5': (8.581,12.740,3.885)
O6: (11.149,5.025,4.268)
O4': (7.719,10.703,2.881)
C8: (9.551,8.996,4.108)
C2: (7.774,5.119,3.178)
C6: (10.053,5.515,3.954)
C5: (9.655,6.881,3.951)
C4: (8.370,7.214,3.553)
P: (10.961,13.009,4.975)
C4': (7.408,11.793,3.790)
C2': (6.364,9.812,4.623)
O2': (5.015,10.023,4.235)
N1: (9.019,4.687,3.533)
N2: (6.951,4.130,2.828)
N3: (7.375,6.388,3.163)
N7: (10.385,8.013,4.295)
N9: (8.314,8.586,3.666)
O5': (9.689,12.142,4.554)
O3': (6.129,11.922,5.861)
Image (generated by PyMOL):