Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12278:12277
Extra
PDB:
ATOM 1 O3' G A2277 0.534 -15.066 153.072 1.00 71.98 O
ATOM 2 P C A2278 -0.054 -16.552 153.240 1.00 73.99 P
ATOM 3 OP1 C A2278 -1.435 -16.503 152.762 1.00 73.92 O
ATOM 4 OP2 C A2278 0.199 -17.012 154.613 1.00 74.68 O
ATOM 5 O5' C A2278 0.829 -17.379 152.230 1.00 73.36 O
ATOM 6 C5' C A2278 0.251 -18.327 151.367 1.00 73.00 C
ATOM 7 C4' C A2278 1.183 -19.485 151.134 1.00 72.79 C
ATOM 8 O4' C A2278 2.482 -19.212 151.715 1.00 72.93 O
ATOM 9 C3' C A2278 0.763 -20.789 151.767 1.00 73.20 C
ATOM 10 O3' C A2278 -0.168 -21.465 150.980 1.00 72.94 O
ATOM 11 C2' C A2278 2.077 -21.535 151.934 1.00 73.16 C
ATOM 12 O2' C A2278 2.499 -22.097 150.695 1.00 72.50 O
ATOM 13 C1' C A2278 3.016 -20.391 152.284 1.00 73.19 C
ATOM 14 N1 C A2278 3.130 -20.188 153.734 1.00 73.93 N
ATOM 15 C2 C A2278 3.766 -21.148 154.519 1.00 74.30 C
ATOM 16 O2 C A2278 4.173 -22.178 153.942 1.00 73.99 O
ATOM 17 N3 C A2278 3.893 -20.915 155.865 1.00 75.00 N
ATOM 18 C4 C A2278 3.412 -19.770 156.402 1.00 75.31 C
ATOM 19 N4 C A2278 3.504 -19.544 157.716 1.00 76.01 N
ATOM 20 C5 C A2278 2.779 -18.779 155.602 1.00 74.93 C
ATOM 21 C6 C A2278 2.663 -19.028 154.291 1.00 74.25 C
ATOM 22 P G A2279 -1.564 -21.837 151.601 1.00 70.60 P
ATOM 23 OP1 G A2279 -2.511 -21.994 150.465 1.00 70.16 O
ATOM 24 OP2 G A2279 -1.855 -20.821 152.647 1.00 71.14 O
ATOM 25 O5' G A2279 -1.258 -23.247 152.270 1.00 70.96 O
TER
ATOM 1 O3' A B2276 4.956 -12.475 151.999 1.00 70.34 O
ATOM 2 P G B2277 3.994 -13.156 150.890 1.00 70.47 P
ATOM 3 OP1 G B2277 4.855 -13.974 149.977 1.00 69.90 O
ATOM 4 OP2 G B2277 3.137 -12.068 150.311 1.00 70.29 O
ATOM 5 O5' G B2277 3.115 -14.105 151.796 1.00 71.02 O
ATOM 6 C5' G B2277 3.733 -14.878 152.793 1.00 71.46 C
ATOM 7 C4' G B2277 2.902 -14.963 154.033 1.00 72.20 C
ATOM 8 O4' G B2277 3.463 -14.089 155.062 1.00 72.69 O
ATOM 9 C3' G B2277 1.483 -14.432 153.971 1.00 72.34 C
ATOM 10 O3' G B2277 0.534 -15.066 153.072 1.00 71.98 O
ATOM 11 C2' G B2277 1.156 -14.370 155.449 1.00 73.17 C
ATOM 12 O2' G B2277 1.250 -15.657 156.037 1.00 73.46 O
ATOM 13 C1' G B2277 2.389 -13.588 155.876 1.00 73.26 C
ATOM 14 N9 G B2277 2.182 -12.162 155.564 1.00 73.14 N
ATOM 15 C8 G B2277 2.537 -11.467 154.412 1.00 72.50 C
ATOM 16 N7 G B2277 2.102 -10.235 154.387 1.00 72.58 N
ATOM 17 C5 G B2277 1.383 -10.117 155.571 1.00 73.30 C
ATOM 18 C6 G B2277 0.688 -9.005 156.113 1.00 73.73 C
ATOM 19 O6 G B2277 0.555 -7.877 155.649 1.00 73.55 O
ATOM 20 N1 G B2277 0.087 -9.296 157.327 1.00 74.45 N
ATOM 21 C2 G B2277 0.155 -10.492 157.974 1.00 74.75 C
ATOM 22 N2 G B2277 -0.504 -10.508 159.140 1.00 75.48 N
ATOM 23 N3 G B2277 0.817 -11.542 157.494 1.00 74.37 N
ATOM 24 C4 G B2277 1.400 -11.294 156.299 1.00 73.66 C
ATOM 25 P C B2278 -0.054 -16.552 153.240 1.00 73.99 P
ATOM 26 OP1 C B2278 -1.435 -16.503 152.762 1.00 73.92 O
ATOM 27 OP2 C B2278 0.199 -17.012 154.613 1.00 74.68 O
ATOM 28 O5' C B2278 0.829 -17.379 152.230 1.00 73.36 O
TER
ATOM 2 P C A2278 -0.054 -16.552 153.240 1.00 73.99 P
ATOM 3 OP1 C A2278 -1.435 -16.503 152.762 1.00 73.92 O
ATOM 4 OP2 C A2278 0.199 -17.012 154.613 1.00 74.68 O
ATOM 5 O5' C A2278 0.829 -17.379 152.230 1.00 73.36 O
ATOM 6 C5' C A2278 0.251 -18.327 151.367 1.00 73.00 C
ATOM 7 C4' C A2278 1.183 -19.485 151.134 1.00 72.79 C
ATOM 8 O4' C A2278 2.482 -19.212 151.715 1.00 72.93 O
ATOM 9 C3' C A2278 0.763 -20.789 151.767 1.00 73.20 C
ATOM 10 O3' C A2278 -0.168 -21.465 150.980 1.00 72.94 O
ATOM 11 C2' C A2278 2.077 -21.535 151.934 1.00 73.16 C
ATOM 12 O2' C A2278 2.499 -22.097 150.695 1.00 72.50 O
ATOM 13 C1' C A2278 3.016 -20.391 152.284 1.00 73.19 C
ATOM 14 N1 C A2278 3.130 -20.188 153.734 1.00 73.93 N
ATOM 15 C2 C A2278 3.766 -21.148 154.519 1.00 74.30 C
ATOM 16 O2 C A2278 4.173 -22.178 153.942 1.00 73.99 O
ATOM 17 N3 C A2278 3.893 -20.915 155.865 1.00 75.00 N
ATOM 18 C4 C A2278 3.412 -19.770 156.402 1.00 75.31 C
ATOM 19 N4 C A2278 3.504 -19.544 157.716 1.00 76.01 N
ATOM 20 C5 C A2278 2.779 -18.779 155.602 1.00 74.93 C
ATOM 21 C6 C A2278 2.663 -19.028 154.291 1.00 74.25 C
ATOM 22 P G A2279 -1.564 -21.837 151.601 1.00 70.60 P
ATOM 23 OP1 G A2279 -2.511 -21.994 150.465 1.00 70.16 O
ATOM 24 OP2 G A2279 -1.855 -20.821 152.647 1.00 71.14 O
ATOM 25 O5' G A2279 -1.258 -23.247 152.270 1.00 70.96 O
TER
ATOM 1 O3' A B2276 4.956 -12.475 151.999 1.00 70.34 O
ATOM 2 P G B2277 3.994 -13.156 150.890 1.00 70.47 P
ATOM 3 OP1 G B2277 4.855 -13.974 149.977 1.00 69.90 O
ATOM 4 OP2 G B2277 3.137 -12.068 150.311 1.00 70.29 O
ATOM 5 O5' G B2277 3.115 -14.105 151.796 1.00 71.02 O
ATOM 6 C5' G B2277 3.733 -14.878 152.793 1.00 71.46 C
ATOM 7 C4' G B2277 2.902 -14.963 154.033 1.00 72.20 C
ATOM 8 O4' G B2277 3.463 -14.089 155.062 1.00 72.69 O
ATOM 9 C3' G B2277 1.483 -14.432 153.971 1.00 72.34 C
ATOM 10 O3' G B2277 0.534 -15.066 153.072 1.00 71.98 O
ATOM 11 C2' G B2277 1.156 -14.370 155.449 1.00 73.17 C
ATOM 12 O2' G B2277 1.250 -15.657 156.037 1.00 73.46 O
ATOM 13 C1' G B2277 2.389 -13.588 155.876 1.00 73.26 C
ATOM 14 N9 G B2277 2.182 -12.162 155.564 1.00 73.14 N
ATOM 15 C8 G B2277 2.537 -11.467 154.412 1.00 72.50 C
ATOM 16 N7 G B2277 2.102 -10.235 154.387 1.00 72.58 N
ATOM 17 C5 G B2277 1.383 -10.117 155.571 1.00 73.30 C
ATOM 18 C6 G B2277 0.688 -9.005 156.113 1.00 73.73 C
ATOM 19 O6 G B2277 0.555 -7.877 155.649 1.00 73.55 O
ATOM 20 N1 G B2277 0.087 -9.296 157.327 1.00 74.45 N
ATOM 21 C2 G B2277 0.155 -10.492 157.974 1.00 74.75 C
ATOM 22 N2 G B2277 -0.504 -10.508 159.140 1.00 75.48 N
ATOM 23 N3 G B2277 0.817 -11.542 157.494 1.00 74.37 N
ATOM 24 C4 G B2277 1.400 -11.294 156.299 1.00 73.66 C
ATOM 25 P C B2278 -0.054 -16.552 153.240 1.00 73.99 P
ATOM 26 OP1 C B2278 -1.435 -16.503 152.762 1.00 73.92 O
ATOM 27 OP2 C B2278 0.199 -17.012 154.613 1.00 74.68 O
ATOM 28 O5' C B2278 0.829 -17.379 152.230 1.00 73.36 O
TER
Atoms:
C2: (3.766,-21.148,154.519)
OP1: (-1.435,-16.503,152.762)
OP2: (0.199,-17.012,154.613)
C4: (3.412,-19.770,156.402)
O5': (0.829,-17.379,152.230)
C3': (0.763,-20.789,151.767)
C1': (3.016,-20.391,152.284)
O4': (2.482,-19.212,151.715)
C5': (0.251,-18.327,151.367)
P: (-0.054,-16.552,153.240)
O2: (4.173,-22.178,153.942)
C4': (1.183,-19.485,151.134)
C2': (2.077,-21.535,151.934)
O2': (2.499,-22.097,150.695)
N1: (3.130,-20.188,153.734)
N3: (3.893,-20.915,155.865)
N4: (3.504,-19.544,157.716)
C6: (2.663,-19.028,154.291)
C5: (2.779,-18.779,155.602)
O3': (-0.168,-21.465,150.980)
OP1: (-1.435,-16.503,152.762)
OP2: (0.199,-17.012,154.613)
C4: (3.412,-19.770,156.402)
O5': (0.829,-17.379,152.230)
C3': (0.763,-20.789,151.767)
C1': (3.016,-20.391,152.284)
O4': (2.482,-19.212,151.715)
C5': (0.251,-18.327,151.367)
P: (-0.054,-16.552,153.240)
O2: (4.173,-22.178,153.942)
C4': (1.183,-19.485,151.134)
C2': (2.077,-21.535,151.934)
O2': (2.499,-22.097,150.695)
N1: (3.130,-20.188,153.734)
N3: (3.893,-20.915,155.865)
N4: (3.504,-19.544,157.716)
C6: (2.663,-19.028,154.291)
C5: (2.779,-18.779,155.602)
O3': (-0.168,-21.465,150.980)
OP1: (4.855,-13.974,149.977)
OP2: (3.137,-12.068,150.311)
C3': (1.483,-14.432,153.971)
C1': (2.389,-13.588,155.876)
C5': (3.733,-14.878,152.793)
O6: (0.555,-7.877,155.649)
O4': (3.463,-14.089,155.062)
C8: (2.537,-11.467,154.412)
C2: (0.155,-10.492,157.974)
C6: (0.688,-9.005,156.113)
C5: (1.383,-10.117,155.571)
C4: (1.400,-11.294,156.299)
P: (3.994,-13.156,150.890)
C4': (2.902,-14.963,154.033)
C2': (1.156,-14.370,155.449)
O2': (1.250,-15.657,156.037)
N1: (0.087,-9.296,157.327)
N2: (-0.504,-10.508,159.140)
N3: (0.817,-11.542,157.494)
N7: (2.102,-10.235,154.387)
N9: (2.182,-12.162,155.564)
O5': (3.115,-14.105,151.796)
O3': (0.534,-15.066,153.072)
OP2: (3.137,-12.068,150.311)
C3': (1.483,-14.432,153.971)
C1': (2.389,-13.588,155.876)
C5': (3.733,-14.878,152.793)
O6: (0.555,-7.877,155.649)
O4': (3.463,-14.089,155.062)
C8: (2.537,-11.467,154.412)
C2: (0.155,-10.492,157.974)
C6: (0.688,-9.005,156.113)
C5: (1.383,-10.117,155.571)
C4: (1.400,-11.294,156.299)
P: (3.994,-13.156,150.890)
C4': (2.902,-14.963,154.033)
C2': (1.156,-14.370,155.449)
O2': (1.250,-15.657,156.037)
N1: (0.087,-9.296,157.327)
N2: (-0.504,-10.508,159.140)
N3: (0.817,-11.542,157.494)
N7: (2.102,-10.235,154.387)
N9: (2.182,-12.162,155.564)
O5': (3.115,-14.105,151.796)
O3': (0.534,-15.066,153.072)
Image (generated by PyMOL):