Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12700:12697
Extra
PDB:
ATOM 1 O3' G A2699 27.846 23.968 64.155 1.00 43.93 O
ATOM 2 P C A2700 26.943 22.948 65.029 1.00 38.98 P
ATOM 3 OP1 C A2700 27.510 22.902 66.401 1.00 38.92 O
ATOM 4 OP2 C A2700 26.845 21.697 64.263 1.00 38.74 O
ATOM 5 O5' C A2700 25.519 23.641 65.068 1.00 39.25 O
ATOM 6 C5' C A2700 25.326 24.958 65.547 1.00 39.54 C
ATOM 7 C4' C A2700 23.923 25.429 65.252 1.00 39.78 C
ATOM 8 O4' C A2700 23.633 25.258 63.849 1.00 39.78 O
ATOM 9 C3' C A2700 22.818 24.672 65.967 1.00 39.72 C
ATOM 10 O3' C A2700 22.601 25.197 67.233 1.00 39.86 O
ATOM 11 C2' C A2700 21.606 24.788 65.025 1.00 39.88 C
ATOM 12 O2' C A2700 20.875 26.011 65.201 1.00 40.23 O
ATOM 13 C1' C A2700 22.296 24.816 63.670 1.00 39.83 C
ATOM 14 N1 C A2700 22.338 23.493 63.021 1.00 39.55 N
ATOM 15 C2 C A2700 21.164 23.012 62.430 1.00 39.59 C
ATOM 16 O2 C A2700 20.124 23.627 62.545 1.00 39.84 O
ATOM 17 N3 C A2700 21.171 21.866 61.757 1.00 39.38 N
ATOM 18 C4 C A2700 22.318 21.241 61.662 1.00 39.13 C
ATOM 19 N4 C A2700 22.228 20.124 61.008 1.00 38.95 N
ATOM 20 C5 C A2700 23.545 21.698 62.224 1.00 39.08 C
ATOM 21 C6 C A2700 23.533 22.854 62.883 1.00 39.30 C
ATOM 22 P U A2701 22.107 24.283 68.417 1.00 44.04 P
ATOM 23 OP1 U A2701 21.838 25.199 69.482 1.00 44.29 O
ATOM 24 OP2 U A2701 23.101 23.168 68.629 1.00 43.71 O
ATOM 25 O5' U A2701 20.743 23.690 67.869 1.00 44.06 O
TER
ATOM 1 O3' U B2696 27.577 18.514 57.258 1.00 37.58 O
ATOM 2 P G B2697 27.241 17.601 58.535 1.00 50.39 P
ATOM 3 OP1 G B2697 27.997 16.392 58.452 1.00 50.13 O
ATOM 4 OP2 G B2697 25.792 17.494 58.617 1.00 50.49 O
ATOM 5 O5' G B2697 27.726 18.490 59.712 1.00 50.45 O
ATOM 6 C5' G B2697 26.869 19.551 60.157 1.00 50.69 C
ATOM 7 C4' G B2697 26.716 19.547 61.644 1.00 50.66 C
ATOM 8 O4' G B2697 25.544 18.817 62.005 1.00 50.62 O
ATOM 9 C3' G B2697 27.847 18.871 62.416 1.00 50.43 C
ATOM 10 O3' G B2697 28.897 19.760 62.705 1.00 50.50 O
ATOM 11 C2' G B2697 27.181 18.313 63.668 1.00 50.36 C
ATOM 12 O2' G B2697 27.463 19.102 64.833 1.00 50.47 O
ATOM 13 C1' G B2697 25.681 18.382 63.328 1.00 50.51 C
ATOM 14 N9 G B2697 25.056 17.078 63.490 1.00 50.34 N
ATOM 15 C8 G B2697 24.170 16.758 64.464 1.00 50.35 C
ATOM 16 N7 G B2697 23.874 15.501 64.425 1.00 50.18 N
ATOM 17 C5 G B2697 24.661 15.001 63.408 1.00 50.04 C
ATOM 18 C6 G B2697 24.786 13.701 62.931 1.00 49.84 C
ATOM 19 O6 G B2697 24.225 12.670 63.295 1.00 49.74 O
ATOM 20 N1 G B2697 25.684 13.625 61.903 1.00 49.78 N
ATOM 21 C2 G B2697 26.398 14.641 61.397 1.00 49.88 C
ATOM 22 N2 G B2697 27.208 14.254 60.395 1.00 49.79 N
ATOM 23 N3 G B2697 26.304 15.883 61.847 1.00 50.07 N
ATOM 24 C4 G B2697 25.421 15.958 62.836 1.00 50.13 C
ATOM 25 P A B2698 30.430 19.318 62.523 1.00 39.11 P
ATOM 26 OP1 A B2698 30.702 19.377 61.090 1.00 39.14 O
ATOM 27 OP2 A B2698 30.634 17.999 63.240 1.00 38.86 O
ATOM 28 O5' A B2698 31.219 20.486 63.301 1.00 39.26 O
TER
ATOM 2 P C A2700 26.943 22.948 65.029 1.00 38.98 P
ATOM 3 OP1 C A2700 27.510 22.902 66.401 1.00 38.92 O
ATOM 4 OP2 C A2700 26.845 21.697 64.263 1.00 38.74 O
ATOM 5 O5' C A2700 25.519 23.641 65.068 1.00 39.25 O
ATOM 6 C5' C A2700 25.326 24.958 65.547 1.00 39.54 C
ATOM 7 C4' C A2700 23.923 25.429 65.252 1.00 39.78 C
ATOM 8 O4' C A2700 23.633 25.258 63.849 1.00 39.78 O
ATOM 9 C3' C A2700 22.818 24.672 65.967 1.00 39.72 C
ATOM 10 O3' C A2700 22.601 25.197 67.233 1.00 39.86 O
ATOM 11 C2' C A2700 21.606 24.788 65.025 1.00 39.88 C
ATOM 12 O2' C A2700 20.875 26.011 65.201 1.00 40.23 O
ATOM 13 C1' C A2700 22.296 24.816 63.670 1.00 39.83 C
ATOM 14 N1 C A2700 22.338 23.493 63.021 1.00 39.55 N
ATOM 15 C2 C A2700 21.164 23.012 62.430 1.00 39.59 C
ATOM 16 O2 C A2700 20.124 23.627 62.545 1.00 39.84 O
ATOM 17 N3 C A2700 21.171 21.866 61.757 1.00 39.38 N
ATOM 18 C4 C A2700 22.318 21.241 61.662 1.00 39.13 C
ATOM 19 N4 C A2700 22.228 20.124 61.008 1.00 38.95 N
ATOM 20 C5 C A2700 23.545 21.698 62.224 1.00 39.08 C
ATOM 21 C6 C A2700 23.533 22.854 62.883 1.00 39.30 C
ATOM 22 P U A2701 22.107 24.283 68.417 1.00 44.04 P
ATOM 23 OP1 U A2701 21.838 25.199 69.482 1.00 44.29 O
ATOM 24 OP2 U A2701 23.101 23.168 68.629 1.00 43.71 O
ATOM 25 O5' U A2701 20.743 23.690 67.869 1.00 44.06 O
TER
ATOM 1 O3' U B2696 27.577 18.514 57.258 1.00 37.58 O
ATOM 2 P G B2697 27.241 17.601 58.535 1.00 50.39 P
ATOM 3 OP1 G B2697 27.997 16.392 58.452 1.00 50.13 O
ATOM 4 OP2 G B2697 25.792 17.494 58.617 1.00 50.49 O
ATOM 5 O5' G B2697 27.726 18.490 59.712 1.00 50.45 O
ATOM 6 C5' G B2697 26.869 19.551 60.157 1.00 50.69 C
ATOM 7 C4' G B2697 26.716 19.547 61.644 1.00 50.66 C
ATOM 8 O4' G B2697 25.544 18.817 62.005 1.00 50.62 O
ATOM 9 C3' G B2697 27.847 18.871 62.416 1.00 50.43 C
ATOM 10 O3' G B2697 28.897 19.760 62.705 1.00 50.50 O
ATOM 11 C2' G B2697 27.181 18.313 63.668 1.00 50.36 C
ATOM 12 O2' G B2697 27.463 19.102 64.833 1.00 50.47 O
ATOM 13 C1' G B2697 25.681 18.382 63.328 1.00 50.51 C
ATOM 14 N9 G B2697 25.056 17.078 63.490 1.00 50.34 N
ATOM 15 C8 G B2697 24.170 16.758 64.464 1.00 50.35 C
ATOM 16 N7 G B2697 23.874 15.501 64.425 1.00 50.18 N
ATOM 17 C5 G B2697 24.661 15.001 63.408 1.00 50.04 C
ATOM 18 C6 G B2697 24.786 13.701 62.931 1.00 49.84 C
ATOM 19 O6 G B2697 24.225 12.670 63.295 1.00 49.74 O
ATOM 20 N1 G B2697 25.684 13.625 61.903 1.00 49.78 N
ATOM 21 C2 G B2697 26.398 14.641 61.397 1.00 49.88 C
ATOM 22 N2 G B2697 27.208 14.254 60.395 1.00 49.79 N
ATOM 23 N3 G B2697 26.304 15.883 61.847 1.00 50.07 N
ATOM 24 C4 G B2697 25.421 15.958 62.836 1.00 50.13 C
ATOM 25 P A B2698 30.430 19.318 62.523 1.00 39.11 P
ATOM 26 OP1 A B2698 30.702 19.377 61.090 1.00 39.14 O
ATOM 27 OP2 A B2698 30.634 17.999 63.240 1.00 38.86 O
ATOM 28 O5' A B2698 31.219 20.486 63.301 1.00 39.26 O
TER
Atoms:
C2: (21.164,23.012,62.430)
OP1: (27.510,22.902,66.401)
OP2: (26.845,21.697,64.263)
C4: (22.318,21.241,61.662)
O5': (25.519,23.641,65.068)
C3': (22.818,24.672,65.967)
C1': (22.296,24.816,63.670)
O4': (23.633,25.258,63.849)
C5': (25.326,24.958,65.547)
P: (26.943,22.948,65.029)
O2: (20.124,23.627,62.545)
C4': (23.923,25.429,65.252)
C2': (21.606,24.788,65.025)
O2': (20.875,26.011,65.201)
N1: (22.338,23.493,63.021)
N3: (21.171,21.866,61.757)
N4: (22.228,20.124,61.008)
C6: (23.533,22.854,62.883)
C5: (23.545,21.698,62.224)
O3': (22.601,25.197,67.233)
OP1: (27.510,22.902,66.401)
OP2: (26.845,21.697,64.263)
C4: (22.318,21.241,61.662)
O5': (25.519,23.641,65.068)
C3': (22.818,24.672,65.967)
C1': (22.296,24.816,63.670)
O4': (23.633,25.258,63.849)
C5': (25.326,24.958,65.547)
P: (26.943,22.948,65.029)
O2: (20.124,23.627,62.545)
C4': (23.923,25.429,65.252)
C2': (21.606,24.788,65.025)
O2': (20.875,26.011,65.201)
N1: (22.338,23.493,63.021)
N3: (21.171,21.866,61.757)
N4: (22.228,20.124,61.008)
C6: (23.533,22.854,62.883)
C5: (23.545,21.698,62.224)
O3': (22.601,25.197,67.233)
OP1: (27.997,16.392,58.452)
OP2: (25.792,17.494,58.617)
C3': (27.847,18.871,62.416)
C1': (25.681,18.382,63.328)
C5': (26.869,19.551,60.157)
O6: (24.225,12.670,63.295)
O4': (25.544,18.817,62.005)
C8: (24.170,16.758,64.464)
C2: (26.398,14.641,61.397)
C6: (24.786,13.701,62.931)
C5: (24.661,15.001,63.408)
C4: (25.421,15.958,62.836)
P: (27.241,17.601,58.535)
C4': (26.716,19.547,61.644)
C2': (27.181,18.313,63.668)
O2': (27.463,19.102,64.833)
N1: (25.684,13.625,61.903)
N2: (27.208,14.254,60.395)
N3: (26.304,15.883,61.847)
N7: (23.874,15.501,64.425)
N9: (25.056,17.078,63.490)
O5': (27.726,18.490,59.712)
O3': (28.897,19.760,62.705)
OP2: (25.792,17.494,58.617)
C3': (27.847,18.871,62.416)
C1': (25.681,18.382,63.328)
C5': (26.869,19.551,60.157)
O6: (24.225,12.670,63.295)
O4': (25.544,18.817,62.005)
C8: (24.170,16.758,64.464)
C2: (26.398,14.641,61.397)
C6: (24.786,13.701,62.931)
C5: (24.661,15.001,63.408)
C4: (25.421,15.958,62.836)
P: (27.241,17.601,58.535)
C4': (26.716,19.547,61.644)
C2': (27.181,18.313,63.668)
O2': (27.463,19.102,64.833)
N1: (25.684,13.625,61.903)
N2: (27.208,14.254,60.395)
N3: (26.304,15.883,61.847)
N7: (23.874,15.501,64.425)
N9: (25.056,17.078,63.490)
O5': (27.726,18.490,59.712)
O3': (28.897,19.760,62.705)
Image (generated by PyMOL):