Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01053:01054
Extra
PDB:
ATOM 1 O3' G A1052 3.971 103.100 102.778 1.00 42.55 O
ATOM 2 P G A1053 4.778 103.046 104.173 1.00 45.89 P
ATOM 3 OP1 G A1053 3.794 103.380 105.232 1.00 43.88 O
ATOM 4 OP2 G A1053 6.014 103.866 104.046 1.00 48.09 O
ATOM 5 O5' G A1053 5.243 101.522 104.327 1.00 43.26 O
ATOM 6 C5' G A1053 4.293 100.493 104.616 1.00 41.96 C
ATOM 7 C4' G A1053 4.930 99.113 104.558 1.00 42.28 C
ATOM 8 O4' G A1053 5.596 98.887 103.289 1.00 40.16 O
ATOM 9 C3' G A1053 5.997 98.704 105.563 1.00 39.83 C
ATOM 10 O3' G A1053 5.434 98.397 106.838 1.00 41.68 O
ATOM 11 C2' G A1053 6.487 97.416 104.917 1.00 40.05 C
ATOM 12 O2' G A1053 5.551 96.372 105.061 1.00 39.89 O
ATOM 13 C1' G A1053 6.496 97.800 103.438 1.00 40.93 C
ATOM 14 N9 G A1053 7.833 98.199 102.999 1.00 43.59 N
ATOM 15 C8 G A1053 8.291 99.468 102.723 1.00 42.48 C
ATOM 16 N7 G A1053 9.544 99.488 102.354 1.00 42.22 N
ATOM 17 C5 G A1053 9.937 98.157 102.384 1.00 42.22 C
ATOM 18 C6 G A1053 11.189 97.557 102.071 1.00 43.34 C
ATOM 19 O6 G A1053 12.228 98.100 101.671 1.00 45.22 O
ATOM 20 N1 G A1053 11.156 96.179 102.255 1.00 43.56 N
ATOM 21 C2 G A1053 10.060 95.464 102.671 1.00 43.97 C
ATOM 22 N2 G A1053 10.224 94.138 102.790 1.00 40.34 N
ATOM 23 N3 G A1053 8.884 96.009 102.951 1.00 43.64 N
ATOM 24 C4 G A1053 8.897 97.349 102.788 1.00 42.76 C
ATOM 25 P U A1054 6.357 98.398 108.163 1.00 41.94 P
ATOM 26 OP1 U A1054 5.464 98.032 109.292 1.00 42.71 O
ATOM 27 OP2 U A1054 7.117 99.670 108.232 1.00 41.95 O
ATOM 28 O5' U A1054 7.371 97.191 107.940 1.00 38.05 O
TER
ATOM 1 O3' G B1053 5.434 98.397 106.838 1.00 41.68 O
ATOM 2 P U B1054 6.357 98.398 108.163 1.00 41.94 P
ATOM 3 OP1 U B1054 5.464 98.032 109.292 1.00 42.71 O
ATOM 4 OP2 U B1054 7.117 99.670 108.232 1.00 41.95 O
ATOM 5 O5' U B1054 7.371 97.191 107.940 1.00 38.05 O
ATOM 6 C5' U B1054 6.933 95.833 108.074 1.00 37.98 C
ATOM 7 C4' U B1054 8.093 94.881 107.902 1.00 40.13 C
ATOM 8 O4' U B1054 8.624 94.975 106.553 1.00 42.75 O
ATOM 9 C3' U B1054 9.307 95.108 108.787 1.00 39.32 C
ATOM 10 O3' U B1054 9.109 94.557 110.077 1.00 39.74 O
ATOM 11 C2' U B1054 10.395 94.377 108.013 1.00 41.47 C
ATOM 12 O2' U B1054 10.319 92.974 108.167 1.00 41.74 O
ATOM 13 C1' U B1054 10.024 94.732 106.573 1.00 41.86 C
ATOM 14 N1 U B1054 10.720 95.936 106.091 1.00 40.93 N
ATOM 15 C2 U B1054 11.931 95.766 105.443 1.00 42.41 C
ATOM 16 O2 U B1054 12.434 94.667 105.255 1.00 43.25 O
ATOM 17 N3 U B1054 12.530 96.929 105.021 1.00 41.66 N
ATOM 18 C4 U B1054 12.050 98.217 105.181 1.00 42.28 C
ATOM 19 O4 U B1054 12.690 99.167 104.728 1.00 41.84 O
ATOM 20 C5 U B1054 10.796 98.306 105.861 1.00 41.98 C
ATOM 21 C6 U B1054 10.191 97.194 106.280 1.00 42.29 C
ATOM 22 P U B1055 10.256 94.688 111.187 1.00 38.80 P
ATOM 23 OP1 U B1055 9.714 94.077 112.419 1.00 39.04 O
ATOM 24 OP2 U B1055 10.743 96.089 111.217 1.00 40.22 O
ATOM 25 O5' U B1055 11.413 93.739 110.635 1.00 40.26 O
TER
ATOM 2 P G A1053 4.778 103.046 104.173 1.00 45.89 P
ATOM 3 OP1 G A1053 3.794 103.380 105.232 1.00 43.88 O
ATOM 4 OP2 G A1053 6.014 103.866 104.046 1.00 48.09 O
ATOM 5 O5' G A1053 5.243 101.522 104.327 1.00 43.26 O
ATOM 6 C5' G A1053 4.293 100.493 104.616 1.00 41.96 C
ATOM 7 C4' G A1053 4.930 99.113 104.558 1.00 42.28 C
ATOM 8 O4' G A1053 5.596 98.887 103.289 1.00 40.16 O
ATOM 9 C3' G A1053 5.997 98.704 105.563 1.00 39.83 C
ATOM 10 O3' G A1053 5.434 98.397 106.838 1.00 41.68 O
ATOM 11 C2' G A1053 6.487 97.416 104.917 1.00 40.05 C
ATOM 12 O2' G A1053 5.551 96.372 105.061 1.00 39.89 O
ATOM 13 C1' G A1053 6.496 97.800 103.438 1.00 40.93 C
ATOM 14 N9 G A1053 7.833 98.199 102.999 1.00 43.59 N
ATOM 15 C8 G A1053 8.291 99.468 102.723 1.00 42.48 C
ATOM 16 N7 G A1053 9.544 99.488 102.354 1.00 42.22 N
ATOM 17 C5 G A1053 9.937 98.157 102.384 1.00 42.22 C
ATOM 18 C6 G A1053 11.189 97.557 102.071 1.00 43.34 C
ATOM 19 O6 G A1053 12.228 98.100 101.671 1.00 45.22 O
ATOM 20 N1 G A1053 11.156 96.179 102.255 1.00 43.56 N
ATOM 21 C2 G A1053 10.060 95.464 102.671 1.00 43.97 C
ATOM 22 N2 G A1053 10.224 94.138 102.790 1.00 40.34 N
ATOM 23 N3 G A1053 8.884 96.009 102.951 1.00 43.64 N
ATOM 24 C4 G A1053 8.897 97.349 102.788 1.00 42.76 C
ATOM 25 P U A1054 6.357 98.398 108.163 1.00 41.94 P
ATOM 26 OP1 U A1054 5.464 98.032 109.292 1.00 42.71 O
ATOM 27 OP2 U A1054 7.117 99.670 108.232 1.00 41.95 O
ATOM 28 O5' U A1054 7.371 97.191 107.940 1.00 38.05 O
TER
ATOM 1 O3' G B1053 5.434 98.397 106.838 1.00 41.68 O
ATOM 2 P U B1054 6.357 98.398 108.163 1.00 41.94 P
ATOM 3 OP1 U B1054 5.464 98.032 109.292 1.00 42.71 O
ATOM 4 OP2 U B1054 7.117 99.670 108.232 1.00 41.95 O
ATOM 5 O5' U B1054 7.371 97.191 107.940 1.00 38.05 O
ATOM 6 C5' U B1054 6.933 95.833 108.074 1.00 37.98 C
ATOM 7 C4' U B1054 8.093 94.881 107.902 1.00 40.13 C
ATOM 8 O4' U B1054 8.624 94.975 106.553 1.00 42.75 O
ATOM 9 C3' U B1054 9.307 95.108 108.787 1.00 39.32 C
ATOM 10 O3' U B1054 9.109 94.557 110.077 1.00 39.74 O
ATOM 11 C2' U B1054 10.395 94.377 108.013 1.00 41.47 C
ATOM 12 O2' U B1054 10.319 92.974 108.167 1.00 41.74 O
ATOM 13 C1' U B1054 10.024 94.732 106.573 1.00 41.86 C
ATOM 14 N1 U B1054 10.720 95.936 106.091 1.00 40.93 N
ATOM 15 C2 U B1054 11.931 95.766 105.443 1.00 42.41 C
ATOM 16 O2 U B1054 12.434 94.667 105.255 1.00 43.25 O
ATOM 17 N3 U B1054 12.530 96.929 105.021 1.00 41.66 N
ATOM 18 C4 U B1054 12.050 98.217 105.181 1.00 42.28 C
ATOM 19 O4 U B1054 12.690 99.167 104.728 1.00 41.84 O
ATOM 20 C5 U B1054 10.796 98.306 105.861 1.00 41.98 C
ATOM 21 C6 U B1054 10.191 97.194 106.280 1.00 42.29 C
ATOM 22 P U B1055 10.256 94.688 111.187 1.00 38.80 P
ATOM 23 OP1 U B1055 9.714 94.077 112.419 1.00 39.04 O
ATOM 24 OP2 U B1055 10.743 96.089 111.217 1.00 40.22 O
ATOM 25 O5' U B1055 11.413 93.739 110.635 1.00 40.26 O
TER
Atoms:
OP1: (3.794,103.380,105.232)
OP2: (6.014,103.866,104.046)
C3': (5.997,98.704,105.563)
C1': (6.496,97.800,103.438)
C5': (4.293,100.493,104.616)
O6: (12.228,98.100,101.671)
O4': (5.596,98.887,103.289)
C8: (8.291,99.468,102.723)
C2: (10.060,95.464,102.671)
C6: (11.189,97.557,102.071)
C5: (9.937,98.157,102.384)
C4: (8.897,97.349,102.788)
P: (4.778,103.046,104.173)
C4': (4.930,99.113,104.558)
C2': (6.487,97.416,104.917)
O2': (5.551,96.372,105.061)
N1: (11.156,96.179,102.255)
N2: (10.224,94.138,102.790)
N3: (8.884,96.009,102.951)
N7: (9.544,99.488,102.354)
N9: (7.833,98.199,102.999)
O5': (5.243,101.522,104.327)
O3': (5.434,98.397,106.838)
OP2: (6.014,103.866,104.046)
C3': (5.997,98.704,105.563)
C1': (6.496,97.800,103.438)
C5': (4.293,100.493,104.616)
O6: (12.228,98.100,101.671)
O4': (5.596,98.887,103.289)
C8: (8.291,99.468,102.723)
C2: (10.060,95.464,102.671)
C6: (11.189,97.557,102.071)
C5: (9.937,98.157,102.384)
C4: (8.897,97.349,102.788)
P: (4.778,103.046,104.173)
C4': (4.930,99.113,104.558)
C2': (6.487,97.416,104.917)
O2': (5.551,96.372,105.061)
N1: (11.156,96.179,102.255)
N2: (10.224,94.138,102.790)
N3: (8.884,96.009,102.951)
N7: (9.544,99.488,102.354)
N9: (7.833,98.199,102.999)
O5': (5.243,101.522,104.327)
O3': (5.434,98.397,106.838)
C4: (12.050,98.217,105.181)
N3: (12.530,96.929,105.021)
OP1: (5.464,98.032,109.292)
OP2: (7.117,99.670,108.232)
C2: (11.931,95.766,105.443)
C1': (10.024,94.732,106.573)
C3': (9.307,95.108,108.787)
O5': (7.371,97.191,107.940)
O4': (8.624,94.975,106.553)
C5': (6.933,95.833,108.074)
P: (6.357,98.398,108.163)
C4': (8.093,94.881,107.902)
C2': (10.395,94.377,108.013)
O2': (10.319,92.974,108.167)
N1: (10.720,95.936,106.091)
O4: (12.690,99.167,104.728)
O2: (12.434,94.667,105.255)
C6: (10.191,97.194,106.280)
C5: (10.796,98.306,105.861)
O3': (9.109,94.557,110.077)
N3: (12.530,96.929,105.021)
OP1: (5.464,98.032,109.292)
OP2: (7.117,99.670,108.232)
C2: (11.931,95.766,105.443)
C1': (10.024,94.732,106.573)
C3': (9.307,95.108,108.787)
O5': (7.371,97.191,107.940)
O4': (8.624,94.975,106.553)
C5': (6.933,95.833,108.074)
P: (6.357,98.398,108.163)
C4': (8.093,94.881,107.902)
C2': (10.395,94.377,108.013)
O2': (10.319,92.974,108.167)
N1: (10.720,95.936,106.091)
O4: (12.690,99.167,104.728)
O2: (12.434,94.667,105.255)
C6: (10.191,97.194,106.280)
C5: (10.796,98.306,105.861)
O3': (9.109,94.557,110.077)
Image (generated by PyMOL):