Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0603:0604
Extra
PDB:
ATOM 1 O3' U A 602 16.628 122.468 108.294 1.00 45.68 O
ATOM 2 P G A 603 17.909 121.498 108.211 1.00 46.21 P
ATOM 3 OP1 G A 603 18.353 121.216 109.596 1.00 46.91 O
ATOM 4 OP2 G A 603 18.873 122.059 107.233 1.00 45.50 O
ATOM 5 O5' G A 603 17.331 120.155 107.591 1.00 42.36 O
ATOM 6 C5' G A 603 16.320 119.414 108.270 1.00 38.86 C
ATOM 7 C4' G A 603 15.957 118.196 107.470 1.00 38.33 C
ATOM 8 O4' G A 603 15.246 118.590 106.271 1.00 39.48 O
ATOM 9 C3' G A 603 17.145 117.413 106.956 1.00 38.59 C
ATOM 10 O3' G A 603 17.654 116.550 107.951 1.00 40.04 O
ATOM 11 C2' G A 603 16.555 116.680 105.763 1.00 39.13 C
ATOM 12 O2' G A 603 15.754 115.586 106.142 1.00 40.33 O
ATOM 13 C1' G A 603 15.638 117.758 105.190 1.00 38.90 C
ATOM 14 N9 G A 603 16.283 118.592 104.178 1.00 37.92 N
ATOM 15 C8 G A 603 16.812 119.852 104.347 1.00 37.46 C
ATOM 16 N7 G A 603 17.288 120.359 103.244 1.00 37.75 N
ATOM 17 C5 G A 603 17.065 119.374 102.290 1.00 37.93 C
ATOM 18 C6 G A 603 17.350 119.357 100.900 1.00 37.85 C
ATOM 19 O6 G A 603 17.853 120.251 100.203 1.00 38.99 O
ATOM 20 N1 G A 603 16.974 118.151 100.318 1.00 37.30 N
ATOM 21 C2 G A 603 16.383 117.104 100.983 1.00 37.76 C
ATOM 22 N2 G A 603 16.097 116.020 100.254 1.00 36.81 N
ATOM 23 N3 G A 603 16.095 117.117 102.269 1.00 37.32 N
ATOM 24 C4 G A 603 16.461 118.272 102.857 1.00 37.15 C
ATOM 25 P U A 604 19.212 116.185 107.955 1.00 40.27 P
ATOM 26 OP1 U A 604 19.495 115.400 109.176 1.00 40.57 O
ATOM 27 OP2 U A 604 19.972 117.440 107.704 1.00 40.70 O
ATOM 28 O5' U A 604 19.337 115.197 106.718 1.00 36.15 O
TER
ATOM 1 O3' G B 603 17.654 116.550 107.951 1.00 40.04 O
ATOM 2 P U B 604 19.212 116.185 107.955 1.00 40.27 P
ATOM 3 OP1 U B 604 19.495 115.400 109.176 1.00 40.57 O
ATOM 4 OP2 U B 604 19.972 117.440 107.704 1.00 40.70 O
ATOM 5 O5' U B 604 19.337 115.197 106.718 1.00 36.15 O
ATOM 6 C5' U B 604 18.645 113.954 106.734 1.00 33.33 C
ATOM 7 C4' U B 604 18.817 113.241 105.425 1.00 35.03 C
ATOM 8 O4' U B 604 18.120 113.953 104.377 1.00 35.78 O
ATOM 9 C3' U B 604 20.235 113.127 104.906 1.00 35.57 C
ATOM 10 O3' U B 604 20.950 112.070 105.529 1.00 38.28 O
ATOM 11 C2' U B 604 20.000 112.860 103.430 1.00 35.44 C
ATOM 12 O2' U B 604 19.615 111.524 103.200 1.00 35.61 O
ATOM 13 C1' U B 604 18.811 113.781 103.149 1.00 36.10 C
ATOM 14 N1 U B 604 19.224 115.106 102.657 1.00 36.77 N
ATOM 15 C2 U B 604 19.492 115.244 101.304 1.00 36.26 C
ATOM 16 O2 U B 604 19.406 114.324 100.509 1.00 37.33 O
ATOM 17 N3 U B 604 19.872 116.502 100.918 1.00 35.86 N
ATOM 18 C4 U B 604 20.016 117.607 101.724 1.00 36.21 C
ATOM 19 O4 U B 604 20.389 118.665 101.231 1.00 38.12 O
ATOM 20 C5 U B 604 19.724 117.387 103.103 1.00 36.68 C
ATOM 21 C6 U B 604 19.347 116.178 103.513 1.00 36.99 C
ATOM 22 P C B 605 22.509 112.264 105.870 1.00 40.08 P
ATOM 23 OP1 C B 605 22.956 111.119 106.708 1.00 38.59 O
ATOM 24 OP2 C B 605 22.690 113.656 106.362 1.00 38.50 O
ATOM 25 O5' C B 605 23.230 112.165 104.451 1.00 40.92 O
TER
ATOM 2 P G A 603 17.909 121.498 108.211 1.00 46.21 P
ATOM 3 OP1 G A 603 18.353 121.216 109.596 1.00 46.91 O
ATOM 4 OP2 G A 603 18.873 122.059 107.233 1.00 45.50 O
ATOM 5 O5' G A 603 17.331 120.155 107.591 1.00 42.36 O
ATOM 6 C5' G A 603 16.320 119.414 108.270 1.00 38.86 C
ATOM 7 C4' G A 603 15.957 118.196 107.470 1.00 38.33 C
ATOM 8 O4' G A 603 15.246 118.590 106.271 1.00 39.48 O
ATOM 9 C3' G A 603 17.145 117.413 106.956 1.00 38.59 C
ATOM 10 O3' G A 603 17.654 116.550 107.951 1.00 40.04 O
ATOM 11 C2' G A 603 16.555 116.680 105.763 1.00 39.13 C
ATOM 12 O2' G A 603 15.754 115.586 106.142 1.00 40.33 O
ATOM 13 C1' G A 603 15.638 117.758 105.190 1.00 38.90 C
ATOM 14 N9 G A 603 16.283 118.592 104.178 1.00 37.92 N
ATOM 15 C8 G A 603 16.812 119.852 104.347 1.00 37.46 C
ATOM 16 N7 G A 603 17.288 120.359 103.244 1.00 37.75 N
ATOM 17 C5 G A 603 17.065 119.374 102.290 1.00 37.93 C
ATOM 18 C6 G A 603 17.350 119.357 100.900 1.00 37.85 C
ATOM 19 O6 G A 603 17.853 120.251 100.203 1.00 38.99 O
ATOM 20 N1 G A 603 16.974 118.151 100.318 1.00 37.30 N
ATOM 21 C2 G A 603 16.383 117.104 100.983 1.00 37.76 C
ATOM 22 N2 G A 603 16.097 116.020 100.254 1.00 36.81 N
ATOM 23 N3 G A 603 16.095 117.117 102.269 1.00 37.32 N
ATOM 24 C4 G A 603 16.461 118.272 102.857 1.00 37.15 C
ATOM 25 P U A 604 19.212 116.185 107.955 1.00 40.27 P
ATOM 26 OP1 U A 604 19.495 115.400 109.176 1.00 40.57 O
ATOM 27 OP2 U A 604 19.972 117.440 107.704 1.00 40.70 O
ATOM 28 O5' U A 604 19.337 115.197 106.718 1.00 36.15 O
TER
ATOM 1 O3' G B 603 17.654 116.550 107.951 1.00 40.04 O
ATOM 2 P U B 604 19.212 116.185 107.955 1.00 40.27 P
ATOM 3 OP1 U B 604 19.495 115.400 109.176 1.00 40.57 O
ATOM 4 OP2 U B 604 19.972 117.440 107.704 1.00 40.70 O
ATOM 5 O5' U B 604 19.337 115.197 106.718 1.00 36.15 O
ATOM 6 C5' U B 604 18.645 113.954 106.734 1.00 33.33 C
ATOM 7 C4' U B 604 18.817 113.241 105.425 1.00 35.03 C
ATOM 8 O4' U B 604 18.120 113.953 104.377 1.00 35.78 O
ATOM 9 C3' U B 604 20.235 113.127 104.906 1.00 35.57 C
ATOM 10 O3' U B 604 20.950 112.070 105.529 1.00 38.28 O
ATOM 11 C2' U B 604 20.000 112.860 103.430 1.00 35.44 C
ATOM 12 O2' U B 604 19.615 111.524 103.200 1.00 35.61 O
ATOM 13 C1' U B 604 18.811 113.781 103.149 1.00 36.10 C
ATOM 14 N1 U B 604 19.224 115.106 102.657 1.00 36.77 N
ATOM 15 C2 U B 604 19.492 115.244 101.304 1.00 36.26 C
ATOM 16 O2 U B 604 19.406 114.324 100.509 1.00 37.33 O
ATOM 17 N3 U B 604 19.872 116.502 100.918 1.00 35.86 N
ATOM 18 C4 U B 604 20.016 117.607 101.724 1.00 36.21 C
ATOM 19 O4 U B 604 20.389 118.665 101.231 1.00 38.12 O
ATOM 20 C5 U B 604 19.724 117.387 103.103 1.00 36.68 C
ATOM 21 C6 U B 604 19.347 116.178 103.513 1.00 36.99 C
ATOM 22 P C B 605 22.509 112.264 105.870 1.00 40.08 P
ATOM 23 OP1 C B 605 22.956 111.119 106.708 1.00 38.59 O
ATOM 24 OP2 C B 605 22.690 113.656 106.362 1.00 38.50 O
ATOM 25 O5' C B 605 23.230 112.165 104.451 1.00 40.92 O
TER
Atoms:
OP1: (18.353,121.216,109.596)
OP2: (18.873,122.059,107.233)
C3': (17.145,117.413,106.956)
C1': (15.638,117.758,105.190)
C5': (16.320,119.414,108.270)
O6: (17.853,120.251,100.203)
O4': (15.246,118.590,106.271)
C8: (16.812,119.852,104.347)
C2: (16.383,117.104,100.983)
C6: (17.350,119.357,100.900)
C5: (17.065,119.374,102.290)
C4: (16.461,118.272,102.857)
P: (17.909,121.498,108.211)
C4': (15.957,118.196,107.470)
C2': (16.555,116.680,105.763)
O2': (15.754,115.586,106.142)
N1: (16.974,118.151,100.318)
N2: (16.097,116.020,100.254)
N3: (16.095,117.117,102.269)
N7: (17.288,120.359,103.244)
N9: (16.283,118.592,104.178)
O5': (17.331,120.155,107.591)
O3': (17.654,116.550,107.951)
OP2: (18.873,122.059,107.233)
C3': (17.145,117.413,106.956)
C1': (15.638,117.758,105.190)
C5': (16.320,119.414,108.270)
O6: (17.853,120.251,100.203)
O4': (15.246,118.590,106.271)
C8: (16.812,119.852,104.347)
C2: (16.383,117.104,100.983)
C6: (17.350,119.357,100.900)
C5: (17.065,119.374,102.290)
C4: (16.461,118.272,102.857)
P: (17.909,121.498,108.211)
C4': (15.957,118.196,107.470)
C2': (16.555,116.680,105.763)
O2': (15.754,115.586,106.142)
N1: (16.974,118.151,100.318)
N2: (16.097,116.020,100.254)
N3: (16.095,117.117,102.269)
N7: (17.288,120.359,103.244)
N9: (16.283,118.592,104.178)
O5': (17.331,120.155,107.591)
O3': (17.654,116.550,107.951)
C4: (20.016,117.607,101.724)
N3: (19.872,116.502,100.918)
OP1: (19.495,115.400,109.176)
OP2: (19.972,117.440,107.704)
C2: (19.492,115.244,101.304)
C1': (18.811,113.781,103.149)
C3': (20.235,113.127,104.906)
O5': (19.337,115.197,106.718)
O4': (18.120,113.953,104.377)
C5': (18.645,113.954,106.734)
P: (19.212,116.185,107.955)
C4': (18.817,113.241,105.425)
C2': (20.000,112.860,103.430)
O2': (19.615,111.524,103.200)
N1: (19.224,115.106,102.657)
O4: (20.389,118.665,101.231)
O2: (19.406,114.324,100.509)
C6: (19.347,116.178,103.513)
C5: (19.724,117.387,103.103)
O3': (20.950,112.070,105.529)
N3: (19.872,116.502,100.918)
OP1: (19.495,115.400,109.176)
OP2: (19.972,117.440,107.704)
C2: (19.492,115.244,101.304)
C1': (18.811,113.781,103.149)
C3': (20.235,113.127,104.906)
O5': (19.337,115.197,106.718)
O4': (18.120,113.953,104.377)
C5': (18.645,113.954,106.734)
P: (19.212,116.185,107.955)
C4': (18.817,113.241,105.425)
C2': (20.000,112.860,103.430)
O2': (19.615,111.524,103.200)
N1: (19.224,115.106,102.657)
O4: (20.389,118.665,101.231)
O2: (19.406,114.324,100.509)
C6: (19.347,116.178,103.513)
C5: (19.724,117.387,103.103)
O3': (20.950,112.070,105.529)
Image (generated by PyMOL):