ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQK:01080:01081

Extra

PDB:
ATOM 1 O3' U A1079 40.280 101.789 132.888 1.00 41.22 O
ATOM 2 P G A1080 40.170 102.301 131.360 1.00 40.77 P
ATOM 3 OP1 G A1080 41.136 101.479 130.591 1.00 39.51 O
ATOM 4 OP2 G A1080 40.239 103.790 131.296 1.00 36.24 O
ATOM 5 O5' G A1080 38.715 101.845 130.909 1.00 37.54 O
ATOM 6 C5' G A1080 38.326 100.469 130.982 1.00 35.75 C
ATOM 7 C4' G A1080 36.826 100.366 130.969 1.00 37.65 C
ATOM 8 O4' G A1080 36.281 101.092 132.108 1.00 39.60 O
ATOM 9 C3' G A1080 36.129 101.014 129.787 1.00 36.92 C
ATOM 10 O3' G A1080 36.154 100.176 128.639 1.00 36.72 O
ATOM 11 C2' G A1080 34.722 101.188 130.335 1.00 36.63 C
ATOM 12 O2' G A1080 34.066 99.942 130.394 1.00 36.54 O
ATOM 13 C1' G A1080 35.018 101.645 131.764 1.00 36.95 C
ATOM 14 N9 G A1080 35.104 103.099 131.880 1.00 35.66 N
ATOM 15 C8 G A1080 36.247 103.858 131.912 1.00 35.50 C
ATOM 16 N7 G A1080 36.009 105.142 131.998 1.00 36.59 N
ATOM 17 C5 G A1080 34.626 105.237 132.031 1.00 36.04 C
ATOM 18 C6 G A1080 33.785 106.380 132.119 1.00 37.43 C
ATOM 19 O6 G A1080 34.107 107.575 132.187 1.00 40.24 O
ATOM 20 N1 G A1080 32.444 106.026 132.122 1.00 33.77 N
ATOM 21 C2 G A1080 31.966 104.746 132.046 1.00 33.00 C
ATOM 22 N2 G A1080 30.626 104.623 132.046 1.00 31.71 N
ATOM 23 N3 G A1080 32.737 103.669 131.969 1.00 32.71 N
ATOM 24 C4 G A1080 34.047 103.988 131.965 1.00 35.30 C
ATOM 25 P U A1081 35.931 100.816 127.172 1.00 39.85 P
ATOM 26 OP1 U A1081 35.807 99.680 126.211 1.00 37.50 O
ATOM 27 OP2 U A1081 36.951 101.873 126.947 1.00 35.66 O
ATOM 28 O5' U A1081 34.519 101.543 127.246 1.00 38.55 O
TER

ATOM 1 O3' G B1080 36.154 100.176 128.639 1.00 36.72 O
ATOM 2 P U B1081 35.931 100.816 127.172 1.00 39.85 P
ATOM 3 OP1 U B1081 35.807 99.680 126.211 1.00 37.50 O
ATOM 4 OP2 U B1081 36.951 101.873 126.947 1.00 35.66 O
ATOM 5 O5' U B1081 34.519 101.543 127.246 1.00 38.55 O
ATOM 6 C5' U B1081 33.311 100.787 127.179 1.00 39.19 C
ATOM 7 C4' U B1081 32.126 101.710 127.176 1.00 40.31 C
ATOM 8 O4' U B1081 32.152 102.536 128.372 1.00 42.11 O
ATOM 9 C3' U B1081 32.106 102.757 126.083 1.00 41.53 C
ATOM 10 O3' U B1081 31.719 102.226 124.823 1.00 44.15 O
ATOM 11 C2' U B1081 31.076 103.733 126.631 1.00 40.41 C
ATOM 12 O2' U B1081 29.751 103.266 126.491 1.00 42.93 O
ATOM 13 C1' U B1081 31.446 103.743 128.116 1.00 40.90 C
ATOM 14 N1 U B1081 32.299 104.901 128.423 1.00 39.54 N
ATOM 15 C2 U B1081 31.651 106.090 128.681 1.00 39.21 C
ATOM 16 O2 U B1081 30.442 106.171 128.751 1.00 40.03 O
ATOM 17 N3 U B1081 32.468 107.176 128.856 1.00 39.70 N
ATOM 18 C4 U B1081 33.844 107.190 128.818 1.00 39.72 C
ATOM 19 O4 U B1081 34.440 108.259 128.970 1.00 39.71 O
ATOM 20 C5 U B1081 34.448 105.911 128.599 1.00 37.94 C
ATOM 21 C6 U B1081 33.675 104.835 128.415 1.00 39.13 C
ATOM 22 P A B1082 32.276 102.907 123.474 1.00 44.09 P
ATOM 23 OP1 A B1082 32.147 104.387 123.582 1.00 40.04 O
ATOM 24 OP2 A B1082 31.635 102.195 122.339 1.00 45.05 O
ATOM 25 O5' A B1082 33.826 102.546 123.482 1.00 46.35 O
TER

Atoms:
OP1: (41.136,101.479,130.591)
OP2: (40.239,103.790,131.296)
C3': (36.129,101.014,129.787)
C1': (35.018,101.645,131.764)
C5': (38.326,100.469,130.982)
O6: (34.107,107.575,132.187)
O4': (36.281,101.092,132.108)
C8: (36.247,103.858,131.912)
C2: (31.966,104.746,132.046)
C6: (33.785,106.380,132.119)
C5: (34.626,105.237,132.031)
C4: (34.047,103.988,131.965)
P: (40.170,102.301,131.360)
C4': (36.826,100.366,130.969)
C2': (34.722,101.188,130.335)
O2': (34.066,99.942,130.394)
N1: (32.444,106.026,132.122)
N2: (30.626,104.623,132.046)
N3: (32.737,103.669,131.969)
N7: (36.009,105.142,131.998)
N9: (35.104,103.099,131.880)
O5': (38.715,101.845,130.909)
O3': (36.154,100.176,128.639)
C4: (33.844,107.190,128.818)
N3: (32.468,107.176,128.856)
OP1: (35.807,99.680,126.211)
OP2: (36.951,101.873,126.947)
C2: (31.651,106.090,128.681)
C1': (31.446,103.743,128.116)
C3': (32.106,102.757,126.083)
O5': (34.519,101.543,127.246)
O4': (32.152,102.536,128.372)
C5': (33.311,100.787,127.179)
P: (35.931,100.816,127.172)
C4': (32.126,101.710,127.176)
C2': (31.076,103.733,126.631)
O2': (29.751,103.266,126.491)
N1: (32.299,104.901,128.423)
O4: (34.440,108.259,128.970)
O2: (30.442,106.171,128.751)
C6: (33.675,104.835,128.415)
C5: (34.448,105.911,128.599)
O3': (31.719,102.226,124.823)
Image (generated by PyMOL):
PyMOL image
show in jmol