Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A322:A323
Extra
PDB:
ATOM 1 O3' G A 321 26.033 137.303 40.462 1.00 46.62 O
ATOM 2 P G A 322 24.947 138.140 41.276 1.00 46.57 P
ATOM 3 OP1 G A 322 25.589 138.567 42.544 1.00 48.39 O
ATOM 4 OP2 G A 322 23.727 137.301 41.325 1.00 46.83 O
ATOM 5 O5' G A 322 24.659 139.422 40.367 1.00 45.72 O
ATOM 6 C5' G A 322 25.701 140.353 40.033 1.00 46.83 C
ATOM 7 C4' G A 322 25.172 141.435 39.125 1.00 47.57 C
ATOM 8 O4' G A 322 24.645 140.843 37.912 1.00 48.22 O
ATOM 9 C3' G A 322 23.990 142.197 39.676 1.00 48.71 C
ATOM 10 O3' G A 322 24.401 143.215 40.548 1.00 49.26 O
ATOM 11 C2' G A 322 23.363 142.772 38.420 1.00 49.16 C
ATOM 12 O2' G A 322 24.102 143.876 37.943 1.00 47.84 O
ATOM 13 C1' G A 322 23.515 141.589 37.465 1.00 50.31 C
ATOM 14 N9 G A 322 22.348 140.707 37.486 1.00 52.45 N
ATOM 15 C8 G A 322 22.287 139.438 38.001 1.00 52.64 C
ATOM 16 N7 G A 322 21.117 138.878 37.856 1.00 53.88 N
ATOM 17 C5 G A 322 20.355 139.838 37.212 1.00 54.91 C
ATOM 18 C6 G A 322 18.996 139.801 36.782 1.00 55.46 C
ATOM 19 O6 G A 322 18.169 138.886 36.895 1.00 54.82 O
ATOM 20 N1 G A 322 18.627 140.990 36.164 1.00 57.06 N
ATOM 21 C2 G A 322 19.454 142.080 35.986 1.00 57.60 C
ATOM 22 N2 G A 322 18.918 143.147 35.361 1.00 57.98 N
ATOM 23 N3 G A 322 20.716 142.125 36.387 1.00 56.12 N
ATOM 24 C4 G A 322 21.098 140.978 36.984 1.00 54.04 C
ATOM 25 P U A 323 23.444 143.628 41.749 1.00 52.02 P
ATOM 26 OP1 U A 323 24.143 144.720 42.477 1.00 50.67 O
ATOM 27 OP2 U A 323 23.075 142.367 42.462 1.00 50.72 O
ATOM 28 O5' U A 323 22.112 144.177 41.048 1.00 53.37 O
TER
ATOM 1 O3' G B 322 24.401 143.215 40.548 1.00 49.26 O
ATOM 2 P U B 323 23.444 143.628 41.749 1.00 52.02 P
ATOM 3 OP1 U B 323 24.143 144.720 42.477 1.00 50.67 O
ATOM 4 OP2 U B 323 23.075 142.367 42.462 1.00 50.72 O
ATOM 5 O5' U B 323 22.112 144.177 41.048 1.00 53.37 O
ATOM 6 C5' U B 323 22.079 145.451 40.359 1.00 52.96 C
ATOM 7 C4' U B 323 20.752 145.646 39.659 1.00 50.96 C
ATOM 8 O4' U B 323 20.459 144.539 38.788 1.00 50.80 O
ATOM 9 C3' U B 323 19.557 145.762 40.572 1.00 50.64 C
ATOM 10 O3' U B 323 19.538 147.134 40.899 1.00 52.57 O
ATOM 11 C2' U B 323 18.399 145.354 39.668 1.00 50.40 C
ATOM 12 O2' U B 323 17.918 146.384 38.833 1.00 50.52 O
ATOM 13 C1' U B 323 19.064 144.316 38.765 1.00 51.18 C
ATOM 14 N1 U B 323 18.811 142.929 39.168 1.00 51.99 N
ATOM 15 C2 U B 323 17.614 142.327 38.789 1.00 51.85 C
ATOM 16 O2 U B 323 16.775 142.872 38.086 1.00 52.00 O
ATOM 17 N3 U B 323 17.447 141.054 39.261 1.00 52.82 N
ATOM 18 C4 U B 323 18.333 140.334 40.041 1.00 53.25 C
ATOM 19 O4 U B 323 17.984 139.251 40.524 1.00 52.75 O
ATOM 20 C5 U B 323 19.544 141.013 40.340 1.00 53.06 C
ATOM 21 C6 U B 323 19.735 142.251 39.912 1.00 52.18 C
ATOM 22 P G B 324 18.393 147.732 41.836 1.00 55.08 P
ATOM 23 OP1 G B 324 17.110 147.118 41.412 1.00 54.57 O
ATOM 24 OP2 G B 324 18.532 149.205 41.854 1.00 55.00 O
ATOM 25 O5' G B 324 18.784 147.183 43.269 1.00 55.51 O
TER
ATOM 2 P G A 322 24.947 138.140 41.276 1.00 46.57 P
ATOM 3 OP1 G A 322 25.589 138.567 42.544 1.00 48.39 O
ATOM 4 OP2 G A 322 23.727 137.301 41.325 1.00 46.83 O
ATOM 5 O5' G A 322 24.659 139.422 40.367 1.00 45.72 O
ATOM 6 C5' G A 322 25.701 140.353 40.033 1.00 46.83 C
ATOM 7 C4' G A 322 25.172 141.435 39.125 1.00 47.57 C
ATOM 8 O4' G A 322 24.645 140.843 37.912 1.00 48.22 O
ATOM 9 C3' G A 322 23.990 142.197 39.676 1.00 48.71 C
ATOM 10 O3' G A 322 24.401 143.215 40.548 1.00 49.26 O
ATOM 11 C2' G A 322 23.363 142.772 38.420 1.00 49.16 C
ATOM 12 O2' G A 322 24.102 143.876 37.943 1.00 47.84 O
ATOM 13 C1' G A 322 23.515 141.589 37.465 1.00 50.31 C
ATOM 14 N9 G A 322 22.348 140.707 37.486 1.00 52.45 N
ATOM 15 C8 G A 322 22.287 139.438 38.001 1.00 52.64 C
ATOM 16 N7 G A 322 21.117 138.878 37.856 1.00 53.88 N
ATOM 17 C5 G A 322 20.355 139.838 37.212 1.00 54.91 C
ATOM 18 C6 G A 322 18.996 139.801 36.782 1.00 55.46 C
ATOM 19 O6 G A 322 18.169 138.886 36.895 1.00 54.82 O
ATOM 20 N1 G A 322 18.627 140.990 36.164 1.00 57.06 N
ATOM 21 C2 G A 322 19.454 142.080 35.986 1.00 57.60 C
ATOM 22 N2 G A 322 18.918 143.147 35.361 1.00 57.98 N
ATOM 23 N3 G A 322 20.716 142.125 36.387 1.00 56.12 N
ATOM 24 C4 G A 322 21.098 140.978 36.984 1.00 54.04 C
ATOM 25 P U A 323 23.444 143.628 41.749 1.00 52.02 P
ATOM 26 OP1 U A 323 24.143 144.720 42.477 1.00 50.67 O
ATOM 27 OP2 U A 323 23.075 142.367 42.462 1.00 50.72 O
ATOM 28 O5' U A 323 22.112 144.177 41.048 1.00 53.37 O
TER
ATOM 1 O3' G B 322 24.401 143.215 40.548 1.00 49.26 O
ATOM 2 P U B 323 23.444 143.628 41.749 1.00 52.02 P
ATOM 3 OP1 U B 323 24.143 144.720 42.477 1.00 50.67 O
ATOM 4 OP2 U B 323 23.075 142.367 42.462 1.00 50.72 O
ATOM 5 O5' U B 323 22.112 144.177 41.048 1.00 53.37 O
ATOM 6 C5' U B 323 22.079 145.451 40.359 1.00 52.96 C
ATOM 7 C4' U B 323 20.752 145.646 39.659 1.00 50.96 C
ATOM 8 O4' U B 323 20.459 144.539 38.788 1.00 50.80 O
ATOM 9 C3' U B 323 19.557 145.762 40.572 1.00 50.64 C
ATOM 10 O3' U B 323 19.538 147.134 40.899 1.00 52.57 O
ATOM 11 C2' U B 323 18.399 145.354 39.668 1.00 50.40 C
ATOM 12 O2' U B 323 17.918 146.384 38.833 1.00 50.52 O
ATOM 13 C1' U B 323 19.064 144.316 38.765 1.00 51.18 C
ATOM 14 N1 U B 323 18.811 142.929 39.168 1.00 51.99 N
ATOM 15 C2 U B 323 17.614 142.327 38.789 1.00 51.85 C
ATOM 16 O2 U B 323 16.775 142.872 38.086 1.00 52.00 O
ATOM 17 N3 U B 323 17.447 141.054 39.261 1.00 52.82 N
ATOM 18 C4 U B 323 18.333 140.334 40.041 1.00 53.25 C
ATOM 19 O4 U B 323 17.984 139.251 40.524 1.00 52.75 O
ATOM 20 C5 U B 323 19.544 141.013 40.340 1.00 53.06 C
ATOM 21 C6 U B 323 19.735 142.251 39.912 1.00 52.18 C
ATOM 22 P G B 324 18.393 147.732 41.836 1.00 55.08 P
ATOM 23 OP1 G B 324 17.110 147.118 41.412 1.00 54.57 O
ATOM 24 OP2 G B 324 18.532 149.205 41.854 1.00 55.00 O
ATOM 25 O5' G B 324 18.784 147.183 43.269 1.00 55.51 O
TER
Atoms:
OP1: (25.589,138.567,42.544)
OP2: (23.727,137.301,41.325)
C3': (23.990,142.197,39.676)
C1': (23.515,141.589,37.465)
C5': (25.701,140.353,40.033)
O6: (18.169,138.886,36.895)
O4': (24.645,140.843,37.912)
C8: (22.287,139.438,38.001)
C2: (19.454,142.080,35.986)
C6: (18.996,139.801,36.782)
C5: (20.355,139.838,37.212)
C4: (21.098,140.978,36.984)
P: (24.947,138.140,41.276)
C4': (25.172,141.435,39.125)
C2': (23.363,142.772,38.420)
O2': (24.102,143.876,37.943)
N1: (18.627,140.990,36.164)
N2: (18.918,143.147,35.361)
N3: (20.716,142.125,36.387)
N7: (21.117,138.878,37.856)
N9: (22.348,140.707,37.486)
O5': (24.659,139.422,40.367)
O3': (24.401,143.215,40.548)
OP2: (23.727,137.301,41.325)
C3': (23.990,142.197,39.676)
C1': (23.515,141.589,37.465)
C5': (25.701,140.353,40.033)
O6: (18.169,138.886,36.895)
O4': (24.645,140.843,37.912)
C8: (22.287,139.438,38.001)
C2: (19.454,142.080,35.986)
C6: (18.996,139.801,36.782)
C5: (20.355,139.838,37.212)
C4: (21.098,140.978,36.984)
P: (24.947,138.140,41.276)
C4': (25.172,141.435,39.125)
C2': (23.363,142.772,38.420)
O2': (24.102,143.876,37.943)
N1: (18.627,140.990,36.164)
N2: (18.918,143.147,35.361)
N3: (20.716,142.125,36.387)
N7: (21.117,138.878,37.856)
N9: (22.348,140.707,37.486)
O5': (24.659,139.422,40.367)
O3': (24.401,143.215,40.548)
C4: (18.333,140.334,40.041)
N3: (17.447,141.054,39.261)
OP1: (24.143,144.720,42.477)
OP2: (23.075,142.367,42.462)
C2: (17.614,142.327,38.789)
C1': (19.064,144.316,38.765)
C3': (19.557,145.762,40.572)
O5': (22.112,144.177,41.048)
O4': (20.459,144.539,38.788)
C5': (22.079,145.451,40.359)
P: (23.444,143.628,41.749)
C4': (20.752,145.646,39.659)
C2': (18.399,145.354,39.668)
O2': (17.918,146.384,38.833)
N1: (18.811,142.929,39.168)
O4: (17.984,139.251,40.524)
O2: (16.775,142.872,38.086)
C6: (19.735,142.251,39.912)
C5: (19.544,141.013,40.340)
O3': (19.538,147.134,40.899)
N3: (17.447,141.054,39.261)
OP1: (24.143,144.720,42.477)
OP2: (23.075,142.367,42.462)
C2: (17.614,142.327,38.789)
C1': (19.064,144.316,38.765)
C3': (19.557,145.762,40.572)
O5': (22.112,144.177,41.048)
O4': (20.459,144.539,38.788)
C5': (22.079,145.451,40.359)
P: (23.444,143.628,41.749)
C4': (20.752,145.646,39.659)
C2': (18.399,145.354,39.668)
O2': (17.918,146.384,38.833)
N1: (18.811,142.929,39.168)
O4: (17.984,139.251,40.524)
O2: (16.775,142.872,38.086)
C6: (19.735,142.251,39.912)
C5: (19.544,141.013,40.340)
O3': (19.538,147.134,40.899)
Image (generated by PyMOL):