Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1957:1958
Extra
PDB:
ATOM 1 O3' G A 956 -5.019 -48.553 4.241 1.00 91.82 O
ATOM 2 P G A 957 -6.520 -49.019 4.600 1.00104.18 P
ATOM 3 OP1 G A 957 -7.228 -49.220 3.312 1.00104.22 O
ATOM 4 OP2 G A 957 -7.086 -48.050 5.574 1.00104.36 O
ATOM 5 O5' G A 957 -6.279 -50.411 5.315 1.00104.35 O
ATOM 6 C5' G A 957 -6.702 -50.610 6.641 1.00104.65 C
ATOM 7 C4' G A 957 -5.803 -51.567 7.361 1.00104.60 C
ATOM 8 O4' G A 957 -4.694 -50.841 7.954 1.00104.31 O
ATOM 9 C3' G A 957 -6.454 -52.310 8.513 1.00105.00 C
ATOM 10 O3' G A 957 -7.075 -53.505 8.082 1.00105.23 O
ATOM 11 C2' G A 957 -5.309 -52.536 9.495 1.00104.85 C
ATOM 12 O2' G A 957 -4.548 -53.677 9.130 1.00104.71 O
ATOM 13 C1' G A 957 -4.465 -51.283 9.273 1.00104.47 C
ATOM 14 N9 G A 957 -4.858 -50.193 10.178 1.00104.58 N
ATOM 15 C8 G A 957 -5.381 -48.987 9.776 1.00104.55 C
ATOM 16 N7 G A 957 -5.651 -48.189 10.765 1.00104.68 N
ATOM 17 C5 G A 957 -5.274 -48.916 11.880 1.00104.80 C
ATOM 18 C6 G A 957 -5.332 -48.559 13.237 1.00104.96 C
ATOM 19 O6 G A 957 -5.739 -47.506 13.738 1.00105.03 O
ATOM 20 N1 G A 957 -4.855 -49.585 14.034 1.00105.04 N
ATOM 21 C2 G A 957 -4.386 -50.794 13.588 1.00104.97 C
ATOM 22 N2 G A 957 -3.981 -51.645 14.535 1.00105.08 N
ATOM 23 N3 G A 957 -4.321 -51.148 12.319 1.00104.82 N
ATOM 24 C4 G A 957 -4.781 -50.157 11.537 1.00104.74 C
ATOM 25 P U A 958 -8.663 -53.706 8.224 1.00128.33 P
ATOM 26 OP1 U A 958 -9.102 -54.503 7.048 1.00128.37 O
ATOM 27 OP2 U A 958 -9.270 -52.369 8.448 1.00128.39 O
ATOM 28 O5' U A 958 -8.758 -54.574 9.555 1.00128.62 O
TER
ATOM 1 O3' G B 957 -7.075 -53.505 8.082 1.00105.23 O
ATOM 2 P U B 958 -8.663 -53.706 8.224 1.00128.33 P
ATOM 3 OP1 U B 958 -9.102 -54.503 7.048 1.00128.37 O
ATOM 4 OP2 U B 958 -9.270 -52.369 8.448 1.00128.39 O
ATOM 5 O5' U B 958 -8.758 -54.574 9.555 1.00128.62 O
ATOM 6 C5' U B 958 -7.612 -55.253 10.058 1.00128.45 C
ATOM 7 C4' U B 958 -7.561 -55.227 11.565 1.00128.63 C
ATOM 8 O4' U B 958 -6.984 -53.988 12.030 1.00128.41 O
ATOM 9 C3' U B 958 -8.894 -55.306 12.282 1.00129.09 C
ATOM 10 O3' U B 958 -9.379 -56.638 12.357 1.00129.37 O
ATOM 11 C2' U B 958 -8.590 -54.687 13.650 1.00129.13 C
ATOM 12 O2' U B 958 -8.118 -55.675 14.553 1.00129.22 O
ATOM 13 C1' U B 958 -7.447 -53.715 13.337 1.00128.68 C
ATOM 14 N1 U B 958 -7.857 -52.271 13.438 1.00128.66 N
ATOM 15 C2 U B 958 -7.802 -51.647 14.695 1.00128.75 C
ATOM 16 O2 U B 958 -7.456 -52.235 15.710 1.00128.85 O
ATOM 17 N3 U B 958 -8.169 -50.309 14.739 1.00128.72 N
ATOM 18 C4 U B 958 -8.577 -49.535 13.664 1.00128.61 C
ATOM 19 O4 U B 958 -8.884 -48.352 13.827 1.00128.60 O
ATOM 20 C5 U B 958 -8.605 -50.231 12.408 1.00128.52 C
ATOM 21 C6 U B 958 -8.254 -51.530 12.337 1.00128.55 C
ATOM 22 P U B 959 -10.938 -56.944 12.589 1.00156.06 P
ATOM 23 OP1 U B 959 -11.155 -58.371 12.251 1.00156.22 O
ATOM 24 OP2 U B 959 -11.713 -55.911 11.851 1.00156.07 O
ATOM 25 O5' U B 959 -11.094 -56.735 14.158 1.00156.29 O
TER
ATOM 2 P G A 957 -6.520 -49.019 4.600 1.00104.18 P
ATOM 3 OP1 G A 957 -7.228 -49.220 3.312 1.00104.22 O
ATOM 4 OP2 G A 957 -7.086 -48.050 5.574 1.00104.36 O
ATOM 5 O5' G A 957 -6.279 -50.411 5.315 1.00104.35 O
ATOM 6 C5' G A 957 -6.702 -50.610 6.641 1.00104.65 C
ATOM 7 C4' G A 957 -5.803 -51.567 7.361 1.00104.60 C
ATOM 8 O4' G A 957 -4.694 -50.841 7.954 1.00104.31 O
ATOM 9 C3' G A 957 -6.454 -52.310 8.513 1.00105.00 C
ATOM 10 O3' G A 957 -7.075 -53.505 8.082 1.00105.23 O
ATOM 11 C2' G A 957 -5.309 -52.536 9.495 1.00104.85 C
ATOM 12 O2' G A 957 -4.548 -53.677 9.130 1.00104.71 O
ATOM 13 C1' G A 957 -4.465 -51.283 9.273 1.00104.47 C
ATOM 14 N9 G A 957 -4.858 -50.193 10.178 1.00104.58 N
ATOM 15 C8 G A 957 -5.381 -48.987 9.776 1.00104.55 C
ATOM 16 N7 G A 957 -5.651 -48.189 10.765 1.00104.68 N
ATOM 17 C5 G A 957 -5.274 -48.916 11.880 1.00104.80 C
ATOM 18 C6 G A 957 -5.332 -48.559 13.237 1.00104.96 C
ATOM 19 O6 G A 957 -5.739 -47.506 13.738 1.00105.03 O
ATOM 20 N1 G A 957 -4.855 -49.585 14.034 1.00105.04 N
ATOM 21 C2 G A 957 -4.386 -50.794 13.588 1.00104.97 C
ATOM 22 N2 G A 957 -3.981 -51.645 14.535 1.00105.08 N
ATOM 23 N3 G A 957 -4.321 -51.148 12.319 1.00104.82 N
ATOM 24 C4 G A 957 -4.781 -50.157 11.537 1.00104.74 C
ATOM 25 P U A 958 -8.663 -53.706 8.224 1.00128.33 P
ATOM 26 OP1 U A 958 -9.102 -54.503 7.048 1.00128.37 O
ATOM 27 OP2 U A 958 -9.270 -52.369 8.448 1.00128.39 O
ATOM 28 O5' U A 958 -8.758 -54.574 9.555 1.00128.62 O
TER
ATOM 1 O3' G B 957 -7.075 -53.505 8.082 1.00105.23 O
ATOM 2 P U B 958 -8.663 -53.706 8.224 1.00128.33 P
ATOM 3 OP1 U B 958 -9.102 -54.503 7.048 1.00128.37 O
ATOM 4 OP2 U B 958 -9.270 -52.369 8.448 1.00128.39 O
ATOM 5 O5' U B 958 -8.758 -54.574 9.555 1.00128.62 O
ATOM 6 C5' U B 958 -7.612 -55.253 10.058 1.00128.45 C
ATOM 7 C4' U B 958 -7.561 -55.227 11.565 1.00128.63 C
ATOM 8 O4' U B 958 -6.984 -53.988 12.030 1.00128.41 O
ATOM 9 C3' U B 958 -8.894 -55.306 12.282 1.00129.09 C
ATOM 10 O3' U B 958 -9.379 -56.638 12.357 1.00129.37 O
ATOM 11 C2' U B 958 -8.590 -54.687 13.650 1.00129.13 C
ATOM 12 O2' U B 958 -8.118 -55.675 14.553 1.00129.22 O
ATOM 13 C1' U B 958 -7.447 -53.715 13.337 1.00128.68 C
ATOM 14 N1 U B 958 -7.857 -52.271 13.438 1.00128.66 N
ATOM 15 C2 U B 958 -7.802 -51.647 14.695 1.00128.75 C
ATOM 16 O2 U B 958 -7.456 -52.235 15.710 1.00128.85 O
ATOM 17 N3 U B 958 -8.169 -50.309 14.739 1.00128.72 N
ATOM 18 C4 U B 958 -8.577 -49.535 13.664 1.00128.61 C
ATOM 19 O4 U B 958 -8.884 -48.352 13.827 1.00128.60 O
ATOM 20 C5 U B 958 -8.605 -50.231 12.408 1.00128.52 C
ATOM 21 C6 U B 958 -8.254 -51.530 12.337 1.00128.55 C
ATOM 22 P U B 959 -10.938 -56.944 12.589 1.00156.06 P
ATOM 23 OP1 U B 959 -11.155 -58.371 12.251 1.00156.22 O
ATOM 24 OP2 U B 959 -11.713 -55.911 11.851 1.00156.07 O
ATOM 25 O5' U B 959 -11.094 -56.735 14.158 1.00156.29 O
TER
Atoms:
OP1: (-7.228,-49.220,3.312)
OP2: (-7.086,-48.050,5.574)
C3': (-6.454,-52.310,8.513)
C1': (-4.465,-51.283,9.273)
C5': (-6.702,-50.610,6.641)
O6: (-5.739,-47.506,13.738)
O4': (-4.694,-50.841,7.954)
C8: (-5.381,-48.987,9.776)
C2: (-4.386,-50.794,13.588)
C6: (-5.332,-48.559,13.237)
C5: (-5.274,-48.916,11.880)
C4: (-4.781,-50.157,11.537)
P: (-6.520,-49.019,4.600)
C4': (-5.803,-51.567,7.361)
C2': (-5.309,-52.536,9.495)
O2': (-4.548,-53.677,9.130)
N1: (-4.855,-49.585,14.034)
N2: (-3.981,-51.645,14.535)
N3: (-4.321,-51.148,12.319)
N7: (-5.651,-48.189,10.765)
N9: (-4.858,-50.193,10.178)
O5': (-6.279,-50.411,5.315)
O3': (-7.075,-53.505,8.082)
OP2: (-7.086,-48.050,5.574)
C3': (-6.454,-52.310,8.513)
C1': (-4.465,-51.283,9.273)
C5': (-6.702,-50.610,6.641)
O6: (-5.739,-47.506,13.738)
O4': (-4.694,-50.841,7.954)
C8: (-5.381,-48.987,9.776)
C2: (-4.386,-50.794,13.588)
C6: (-5.332,-48.559,13.237)
C5: (-5.274,-48.916,11.880)
C4: (-4.781,-50.157,11.537)
P: (-6.520,-49.019,4.600)
C4': (-5.803,-51.567,7.361)
C2': (-5.309,-52.536,9.495)
O2': (-4.548,-53.677,9.130)
N1: (-4.855,-49.585,14.034)
N2: (-3.981,-51.645,14.535)
N3: (-4.321,-51.148,12.319)
N7: (-5.651,-48.189,10.765)
N9: (-4.858,-50.193,10.178)
O5': (-6.279,-50.411,5.315)
O3': (-7.075,-53.505,8.082)
C4: (-8.577,-49.535,13.664)
N3: (-8.169,-50.309,14.739)
OP1: (-9.102,-54.503,7.048)
OP2: (-9.270,-52.369,8.448)
C2: (-7.802,-51.647,14.695)
C1': (-7.447,-53.715,13.337)
C3': (-8.894,-55.306,12.282)
O5': (-8.758,-54.574,9.555)
O4': (-6.984,-53.988,12.030)
C5': (-7.612,-55.253,10.058)
P: (-8.663,-53.706,8.224)
C4': (-7.561,-55.227,11.565)
C2': (-8.590,-54.687,13.650)
O2': (-8.118,-55.675,14.553)
N1: (-7.857,-52.271,13.438)
O4: (-8.884,-48.352,13.827)
O2: (-7.456,-52.235,15.710)
C6: (-8.254,-51.530,12.337)
C5: (-8.605,-50.231,12.408)
O3': (-9.379,-56.638,12.357)
N3: (-8.169,-50.309,14.739)
OP1: (-9.102,-54.503,7.048)
OP2: (-9.270,-52.369,8.448)
C2: (-7.802,-51.647,14.695)
C1': (-7.447,-53.715,13.337)
C3': (-8.894,-55.306,12.282)
O5': (-8.758,-54.574,9.555)
O4': (-6.984,-53.988,12.030)
C5': (-7.612,-55.253,10.058)
P: (-8.663,-53.706,8.224)
C4': (-7.561,-55.227,11.565)
C2': (-8.590,-54.687,13.650)
O2': (-8.118,-55.675,14.553)
N1: (-7.857,-52.271,13.438)
O4: (-8.884,-48.352,13.827)
O2: (-7.456,-52.235,15.710)
C6: (-8.254,-51.530,12.337)
C5: (-8.605,-50.231,12.408)
O3': (-9.379,-56.638,12.357)
Image (generated by PyMOL):