Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:02021:02022
Extra
PDB:
ATOM 1 O3' A A2020 44.234 122.924 105.619 1.00 36.32 O
ATOM 2 P G A2021 44.767 124.389 105.222 1.00 38.92 P
ATOM 3 OP1 G A2021 44.914 124.409 103.737 1.00 37.08 O
ATOM 4 OP2 G A2021 45.924 124.754 106.082 1.00 39.42 O
ATOM 5 O5' G A2021 43.573 125.352 105.635 1.00 34.51 O
ATOM 6 C5' G A2021 43.259 125.581 107.019 1.00 32.05 C
ATOM 7 C4' G A2021 41.865 126.125 107.134 1.00 31.33 C
ATOM 8 O4' G A2021 41.803 127.414 106.481 1.00 31.48 O
ATOM 9 C3' G A2021 40.834 125.274 106.423 1.00 31.38 C
ATOM 10 O3' G A2021 40.338 124.279 107.296 1.00 31.71 O
ATOM 11 C2' G A2021 39.777 126.285 106.024 1.00 30.74 C
ATOM 12 O2' G A2021 38.956 126.613 107.120 1.00 29.88 O
ATOM 13 C1' G A2021 40.647 127.490 105.669 1.00 31.37 C
ATOM 14 N9 G A2021 41.099 127.561 104.281 1.00 33.36 N
ATOM 15 C8 G A2021 42.404 127.635 103.856 1.00 34.94 C
ATOM 16 N7 G A2021 42.520 127.736 102.563 1.00 35.94 N
ATOM 17 C5 G A2021 41.216 127.719 102.101 1.00 34.88 C
ATOM 18 C6 G A2021 40.721 127.804 100.784 1.00 36.54 C
ATOM 19 O6 G A2021 41.361 127.935 99.721 1.00 34.38 O
ATOM 20 N1 G A2021 39.329 127.730 100.762 1.00 37.60 N
ATOM 21 C2 G A2021 38.526 127.600 101.871 1.00 35.97 C
ATOM 22 N2 G A2021 37.211 127.537 101.650 1.00 36.79 N
ATOM 23 N3 G A2021 38.981 127.534 103.106 1.00 34.99 N
ATOM 24 C4 G A2021 40.325 127.597 103.148 1.00 34.25 C
ATOM 25 P U A2022 40.063 122.809 106.737 1.00 33.28 P
ATOM 26 OP1 U A2022 39.548 122.030 107.885 1.00 34.35 O
ATOM 27 OP2 U A2022 41.261 122.340 106.002 1.00 31.86 O
ATOM 28 O5' U A2022 38.890 123.005 105.683 1.00 31.94 O
TER
ATOM 1 O3' G B2021 40.338 124.279 107.296 1.00 31.71 O
ATOM 2 P U B2022 40.063 122.809 106.737 1.00 33.28 P
ATOM 3 OP1 U B2022 39.548 122.030 107.885 1.00 34.35 O
ATOM 4 OP2 U B2022 41.261 122.340 106.002 1.00 31.86 O
ATOM 5 O5' U B2022 38.890 123.005 105.683 1.00 31.94 O
ATOM 6 C5' U B2022 37.619 123.505 106.092 1.00 31.75 C
ATOM 7 C4' U B2022 36.617 123.319 104.989 1.00 33.89 C
ATOM 8 O4' U B2022 37.019 124.123 103.844 1.00 35.61 O
ATOM 9 C3' U B2022 36.461 121.893 104.474 1.00 35.10 C
ATOM 10 O3' U B2022 35.102 121.664 104.132 1.00 35.25 O
ATOM 11 C2' U B2022 37.333 121.890 103.221 1.00 36.63 C
ATOM 12 O2' U B2022 36.939 120.945 102.240 1.00 39.03 O
ATOM 13 C1' U B2022 37.115 123.304 102.700 1.00 35.75 C
ATOM 14 N1 U B2022 38.221 123.785 101.860 1.00 36.09 N
ATOM 15 C2 U B2022 37.929 124.113 100.546 1.00 36.13 C
ATOM 16 O2 U B2022 36.808 124.039 100.076 1.00 33.81 O
ATOM 17 N3 U B2022 39.005 124.530 99.801 1.00 37.77 N
ATOM 18 C4 U B2022 40.315 124.651 100.223 1.00 38.07 C
ATOM 19 O4 U B2022 41.180 125.000 99.417 1.00 38.53 O
ATOM 20 C5 U B2022 40.534 124.307 101.598 1.00 36.93 C
ATOM 21 C6 U B2022 39.507 123.897 102.350 1.00 36.17 C
ATOM 22 P C B2023 34.179 120.792 105.111 1.00 35.32 P
ATOM 23 OP1 C B2023 32.817 120.755 104.532 1.00 33.53 O
ATOM 24 OP2 C B2023 34.376 121.304 106.493 1.00 35.32 O
ATOM 25 O5' C B2023 34.822 119.341 105.041 1.00 33.94 O
TER
ATOM 2 P G A2021 44.767 124.389 105.222 1.00 38.92 P
ATOM 3 OP1 G A2021 44.914 124.409 103.737 1.00 37.08 O
ATOM 4 OP2 G A2021 45.924 124.754 106.082 1.00 39.42 O
ATOM 5 O5' G A2021 43.573 125.352 105.635 1.00 34.51 O
ATOM 6 C5' G A2021 43.259 125.581 107.019 1.00 32.05 C
ATOM 7 C4' G A2021 41.865 126.125 107.134 1.00 31.33 C
ATOM 8 O4' G A2021 41.803 127.414 106.481 1.00 31.48 O
ATOM 9 C3' G A2021 40.834 125.274 106.423 1.00 31.38 C
ATOM 10 O3' G A2021 40.338 124.279 107.296 1.00 31.71 O
ATOM 11 C2' G A2021 39.777 126.285 106.024 1.00 30.74 C
ATOM 12 O2' G A2021 38.956 126.613 107.120 1.00 29.88 O
ATOM 13 C1' G A2021 40.647 127.490 105.669 1.00 31.37 C
ATOM 14 N9 G A2021 41.099 127.561 104.281 1.00 33.36 N
ATOM 15 C8 G A2021 42.404 127.635 103.856 1.00 34.94 C
ATOM 16 N7 G A2021 42.520 127.736 102.563 1.00 35.94 N
ATOM 17 C5 G A2021 41.216 127.719 102.101 1.00 34.88 C
ATOM 18 C6 G A2021 40.721 127.804 100.784 1.00 36.54 C
ATOM 19 O6 G A2021 41.361 127.935 99.721 1.00 34.38 O
ATOM 20 N1 G A2021 39.329 127.730 100.762 1.00 37.60 N
ATOM 21 C2 G A2021 38.526 127.600 101.871 1.00 35.97 C
ATOM 22 N2 G A2021 37.211 127.537 101.650 1.00 36.79 N
ATOM 23 N3 G A2021 38.981 127.534 103.106 1.00 34.99 N
ATOM 24 C4 G A2021 40.325 127.597 103.148 1.00 34.25 C
ATOM 25 P U A2022 40.063 122.809 106.737 1.00 33.28 P
ATOM 26 OP1 U A2022 39.548 122.030 107.885 1.00 34.35 O
ATOM 27 OP2 U A2022 41.261 122.340 106.002 1.00 31.86 O
ATOM 28 O5' U A2022 38.890 123.005 105.683 1.00 31.94 O
TER
ATOM 1 O3' G B2021 40.338 124.279 107.296 1.00 31.71 O
ATOM 2 P U B2022 40.063 122.809 106.737 1.00 33.28 P
ATOM 3 OP1 U B2022 39.548 122.030 107.885 1.00 34.35 O
ATOM 4 OP2 U B2022 41.261 122.340 106.002 1.00 31.86 O
ATOM 5 O5' U B2022 38.890 123.005 105.683 1.00 31.94 O
ATOM 6 C5' U B2022 37.619 123.505 106.092 1.00 31.75 C
ATOM 7 C4' U B2022 36.617 123.319 104.989 1.00 33.89 C
ATOM 8 O4' U B2022 37.019 124.123 103.844 1.00 35.61 O
ATOM 9 C3' U B2022 36.461 121.893 104.474 1.00 35.10 C
ATOM 10 O3' U B2022 35.102 121.664 104.132 1.00 35.25 O
ATOM 11 C2' U B2022 37.333 121.890 103.221 1.00 36.63 C
ATOM 12 O2' U B2022 36.939 120.945 102.240 1.00 39.03 O
ATOM 13 C1' U B2022 37.115 123.304 102.700 1.00 35.75 C
ATOM 14 N1 U B2022 38.221 123.785 101.860 1.00 36.09 N
ATOM 15 C2 U B2022 37.929 124.113 100.546 1.00 36.13 C
ATOM 16 O2 U B2022 36.808 124.039 100.076 1.00 33.81 O
ATOM 17 N3 U B2022 39.005 124.530 99.801 1.00 37.77 N
ATOM 18 C4 U B2022 40.315 124.651 100.223 1.00 38.07 C
ATOM 19 O4 U B2022 41.180 125.000 99.417 1.00 38.53 O
ATOM 20 C5 U B2022 40.534 124.307 101.598 1.00 36.93 C
ATOM 21 C6 U B2022 39.507 123.897 102.350 1.00 36.17 C
ATOM 22 P C B2023 34.179 120.792 105.111 1.00 35.32 P
ATOM 23 OP1 C B2023 32.817 120.755 104.532 1.00 33.53 O
ATOM 24 OP2 C B2023 34.376 121.304 106.493 1.00 35.32 O
ATOM 25 O5' C B2023 34.822 119.341 105.041 1.00 33.94 O
TER
Atoms:
OP1: (44.914,124.409,103.737)
OP2: (45.924,124.754,106.082)
C3': (40.834,125.274,106.423)
C1': (40.647,127.490,105.669)
C5': (43.259,125.581,107.019)
O6: (41.361,127.935,99.721)
O4': (41.803,127.414,106.481)
C8: (42.404,127.635,103.856)
C2: (38.526,127.600,101.871)
C6: (40.721,127.804,100.784)
C5: (41.216,127.719,102.101)
C4: (40.325,127.597,103.148)
P: (44.767,124.389,105.222)
C4': (41.865,126.125,107.134)
C2': (39.777,126.285,106.024)
O2': (38.956,126.613,107.120)
N1: (39.329,127.730,100.762)
N2: (37.211,127.537,101.650)
N3: (38.981,127.534,103.106)
N7: (42.520,127.736,102.563)
N9: (41.099,127.561,104.281)
O5': (43.573,125.352,105.635)
O3': (40.338,124.279,107.296)
OP2: (45.924,124.754,106.082)
C3': (40.834,125.274,106.423)
C1': (40.647,127.490,105.669)
C5': (43.259,125.581,107.019)
O6: (41.361,127.935,99.721)
O4': (41.803,127.414,106.481)
C8: (42.404,127.635,103.856)
C2: (38.526,127.600,101.871)
C6: (40.721,127.804,100.784)
C5: (41.216,127.719,102.101)
C4: (40.325,127.597,103.148)
P: (44.767,124.389,105.222)
C4': (41.865,126.125,107.134)
C2': (39.777,126.285,106.024)
O2': (38.956,126.613,107.120)
N1: (39.329,127.730,100.762)
N2: (37.211,127.537,101.650)
N3: (38.981,127.534,103.106)
N7: (42.520,127.736,102.563)
N9: (41.099,127.561,104.281)
O5': (43.573,125.352,105.635)
O3': (40.338,124.279,107.296)
C4: (40.315,124.651,100.223)
N3: (39.005,124.530,99.801)
OP1: (39.548,122.030,107.885)
OP2: (41.261,122.340,106.002)
C2: (37.929,124.113,100.546)
C1': (37.115,123.304,102.700)
C3': (36.461,121.893,104.474)
O5': (38.890,123.005,105.683)
O4': (37.019,124.123,103.844)
C5': (37.619,123.505,106.092)
P: (40.063,122.809,106.737)
C4': (36.617,123.319,104.989)
C2': (37.333,121.890,103.221)
O2': (36.939,120.945,102.240)
N1: (38.221,123.785,101.860)
O4: (41.180,125.000,99.417)
O2: (36.808,124.039,100.076)
C6: (39.507,123.897,102.350)
C5: (40.534,124.307,101.598)
O3': (35.102,121.664,104.132)
N3: (39.005,124.530,99.801)
OP1: (39.548,122.030,107.885)
OP2: (41.261,122.340,106.002)
C2: (37.929,124.113,100.546)
C1': (37.115,123.304,102.700)
C3': (36.461,121.893,104.474)
O5': (38.890,123.005,105.683)
O4': (37.019,124.123,103.844)
C5': (37.619,123.505,106.092)
P: (40.063,122.809,106.737)
C4': (36.617,123.319,104.989)
C2': (37.333,121.890,103.221)
O2': (36.939,120.945,102.240)
N1: (38.221,123.785,101.860)
O4: (41.180,125.000,99.417)
O2: (36.808,124.039,100.076)
C6: (39.507,123.897,102.350)
C5: (40.534,124.307,101.598)
O3': (35.102,121.664,104.132)
Image (generated by PyMOL):