Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A947:A948
Extra
PDB:
ATOM 1 O3' G A 946 -117.463 -64.751 4.771 1.00 0.01 O
ATOM 2 P G A 947 -116.622 -63.613 4.022 1.00 0.01 P
ATOM 3 OP1 G A 947 -117.587 -62.707 3.433 1.00 0.01 O
ATOM 4 OP2 G A 947 -115.655 -64.276 3.139 1.00 0.01 O
ATOM 5 O5' G A 947 -115.850 -62.902 5.193 1.00 0.01 O
ATOM 6 C5' G A 947 -116.478 -61.949 6.014 1.00 0.01 C
ATOM 7 C4' G A 947 -115.484 -61.304 6.925 1.00 0.01 C
ATOM 8 O4' G A 947 -114.744 -62.328 7.634 1.00 0.01 O
ATOM 9 C3' G A 947 -114.399 -60.509 6.250 1.00 0.01 C
ATOM 10 O3' G A 947 -114.808 -59.241 5.821 1.00 0.01 O
ATOM 11 C2' G A 947 -113.321 -60.485 7.306 1.00 0.01 C
ATOM 12 O2' G A 947 -113.668 -59.605 8.363 1.00 0.01 O
ATOM 13 C1' G A 947 -113.412 -61.910 7.813 1.00 0.01 C
ATOM 14 N9 G A 947 -112.539 -62.806 7.056 1.00 0.01 N
ATOM 15 C8 G A 947 -112.943 -63.729 6.163 1.00 0.01 C
ATOM 16 N7 G A 947 -111.956 -64.383 5.647 1.00 0.01 N
ATOM 17 C5 G A 947 -110.814 -63.852 6.231 1.00 0.01 C
ATOM 18 C6 G A 947 -109.431 -64.163 6.056 1.00 0.01 C
ATOM 19 O6 G A 947 -108.898 -65.006 5.304 1.00 0.01 O
ATOM 20 N1 G A 947 -108.646 -63.371 6.877 1.00 0.01 N
ATOM 21 C2 G A 947 -109.104 -62.426 7.735 1.00 0.01 C
ATOM 22 N2 G A 947 -108.215 -61.751 8.446 1.00 0.01 N
ATOM 23 N3 G A 947 -110.360 -62.146 7.887 1.00 0.01 N
ATOM 24 C4 G A 947 -111.171 -62.880 7.113 1.00 0.01 C
ATOM 25 P U A 948 -114.452 -58.803 4.349 1.00 0.01 P
ATOM 26 OP1 U A 948 -115.133 -57.570 4.076 1.00 0.01 O
ATOM 27 OP2 U A 948 -114.709 -59.967 3.494 1.00 0.01 O
ATOM 28 O5' U A 948 -112.909 -58.552 4.411 1.00 0.01 O
TER
ATOM 1 O3' G B 947 -114.808 -59.241 5.821 1.00 0.01 O
ATOM 2 P U B 948 -114.452 -58.803 4.349 1.00 0.01 P
ATOM 3 OP1 U B 948 -115.133 -57.570 4.076 1.00 0.01 O
ATOM 4 OP2 U B 948 -114.709 -59.967 3.494 1.00 0.01 O
ATOM 5 O5' U B 948 -112.909 -58.552 4.411 1.00 0.01 O
ATOM 6 C5' U B 948 -112.339 -57.781 5.430 1.00 0.01 C
ATOM 7 C4' U B 948 -110.843 -57.861 5.380 1.00 0.01 C
ATOM 8 O4' U B 948 -110.409 -59.162 5.830 1.00 0.01 O
ATOM 9 C3' U B 948 -110.213 -57.732 4.011 1.00 0.01 C
ATOM 10 O3' U B 948 -110.155 -56.398 3.566 1.00 0.01 O
ATOM 11 C2' U B 948 -108.857 -58.356 4.254 1.00 0.01 C
ATOM 12 O2' U B 948 -108.026 -57.477 4.999 1.00 0.01 O
ATOM 13 C1' U B 948 -109.245 -59.532 5.148 1.00 0.01 C
ATOM 14 N1 U B 948 -109.550 -60.737 4.377 1.00 0.01 N
ATOM 15 C2 U B 948 -108.507 -61.458 3.864 1.00 0.01 C
ATOM 16 O2 U B 948 -107.343 -61.150 4.023 1.00 0.01 O
ATOM 17 N3 U B 948 -108.892 -62.553 3.148 1.00 0.01 N
ATOM 18 C4 U B 948 -110.171 -63.003 2.905 1.00 0.01 C
ATOM 19 O4 U B 948 -110.329 -64.030 2.238 1.00 0.01 O
ATOM 20 C5 U B 948 -111.207 -62.202 3.473 1.00 0.01 C
ATOM 21 C6 U B 948 -110.854 -61.126 4.176 1.00 0.01 C
ATOM 22 P G B 949 -110.156 -56.060 2.013 1.00 0.01 P
ATOM 23 OP1 G B 949 -109.772 -54.662 1.885 1.00 0.01 O
ATOM 24 OP2 G B 949 -111.428 -56.482 1.475 1.00 0.01 O
ATOM 25 O5' G B 949 -109.013 -56.976 1.455 1.00 0.01 O
TER
ATOM 2 P G A 947 -116.622 -63.613 4.022 1.00 0.01 P
ATOM 3 OP1 G A 947 -117.587 -62.707 3.433 1.00 0.01 O
ATOM 4 OP2 G A 947 -115.655 -64.276 3.139 1.00 0.01 O
ATOM 5 O5' G A 947 -115.850 -62.902 5.193 1.00 0.01 O
ATOM 6 C5' G A 947 -116.478 -61.949 6.014 1.00 0.01 C
ATOM 7 C4' G A 947 -115.484 -61.304 6.925 1.00 0.01 C
ATOM 8 O4' G A 947 -114.744 -62.328 7.634 1.00 0.01 O
ATOM 9 C3' G A 947 -114.399 -60.509 6.250 1.00 0.01 C
ATOM 10 O3' G A 947 -114.808 -59.241 5.821 1.00 0.01 O
ATOM 11 C2' G A 947 -113.321 -60.485 7.306 1.00 0.01 C
ATOM 12 O2' G A 947 -113.668 -59.605 8.363 1.00 0.01 O
ATOM 13 C1' G A 947 -113.412 -61.910 7.813 1.00 0.01 C
ATOM 14 N9 G A 947 -112.539 -62.806 7.056 1.00 0.01 N
ATOM 15 C8 G A 947 -112.943 -63.729 6.163 1.00 0.01 C
ATOM 16 N7 G A 947 -111.956 -64.383 5.647 1.00 0.01 N
ATOM 17 C5 G A 947 -110.814 -63.852 6.231 1.00 0.01 C
ATOM 18 C6 G A 947 -109.431 -64.163 6.056 1.00 0.01 C
ATOM 19 O6 G A 947 -108.898 -65.006 5.304 1.00 0.01 O
ATOM 20 N1 G A 947 -108.646 -63.371 6.877 1.00 0.01 N
ATOM 21 C2 G A 947 -109.104 -62.426 7.735 1.00 0.01 C
ATOM 22 N2 G A 947 -108.215 -61.751 8.446 1.00 0.01 N
ATOM 23 N3 G A 947 -110.360 -62.146 7.887 1.00 0.01 N
ATOM 24 C4 G A 947 -111.171 -62.880 7.113 1.00 0.01 C
ATOM 25 P U A 948 -114.452 -58.803 4.349 1.00 0.01 P
ATOM 26 OP1 U A 948 -115.133 -57.570 4.076 1.00 0.01 O
ATOM 27 OP2 U A 948 -114.709 -59.967 3.494 1.00 0.01 O
ATOM 28 O5' U A 948 -112.909 -58.552 4.411 1.00 0.01 O
TER
ATOM 1 O3' G B 947 -114.808 -59.241 5.821 1.00 0.01 O
ATOM 2 P U B 948 -114.452 -58.803 4.349 1.00 0.01 P
ATOM 3 OP1 U B 948 -115.133 -57.570 4.076 1.00 0.01 O
ATOM 4 OP2 U B 948 -114.709 -59.967 3.494 1.00 0.01 O
ATOM 5 O5' U B 948 -112.909 -58.552 4.411 1.00 0.01 O
ATOM 6 C5' U B 948 -112.339 -57.781 5.430 1.00 0.01 C
ATOM 7 C4' U B 948 -110.843 -57.861 5.380 1.00 0.01 C
ATOM 8 O4' U B 948 -110.409 -59.162 5.830 1.00 0.01 O
ATOM 9 C3' U B 948 -110.213 -57.732 4.011 1.00 0.01 C
ATOM 10 O3' U B 948 -110.155 -56.398 3.566 1.00 0.01 O
ATOM 11 C2' U B 948 -108.857 -58.356 4.254 1.00 0.01 C
ATOM 12 O2' U B 948 -108.026 -57.477 4.999 1.00 0.01 O
ATOM 13 C1' U B 948 -109.245 -59.532 5.148 1.00 0.01 C
ATOM 14 N1 U B 948 -109.550 -60.737 4.377 1.00 0.01 N
ATOM 15 C2 U B 948 -108.507 -61.458 3.864 1.00 0.01 C
ATOM 16 O2 U B 948 -107.343 -61.150 4.023 1.00 0.01 O
ATOM 17 N3 U B 948 -108.892 -62.553 3.148 1.00 0.01 N
ATOM 18 C4 U B 948 -110.171 -63.003 2.905 1.00 0.01 C
ATOM 19 O4 U B 948 -110.329 -64.030 2.238 1.00 0.01 O
ATOM 20 C5 U B 948 -111.207 -62.202 3.473 1.00 0.01 C
ATOM 21 C6 U B 948 -110.854 -61.126 4.176 1.00 0.01 C
ATOM 22 P G B 949 -110.156 -56.060 2.013 1.00 0.01 P
ATOM 23 OP1 G B 949 -109.772 -54.662 1.885 1.00 0.01 O
ATOM 24 OP2 G B 949 -111.428 -56.482 1.475 1.00 0.01 O
ATOM 25 O5' G B 949 -109.013 -56.976 1.455 1.00 0.01 O
TER
Atoms:
OP1: (-117.587,-62.707,3.433)
OP2: (-115.655,-64.276,3.139)
C3': (-114.399,-60.509,6.250)
C1': (-113.412,-61.910,7.813)
C5': (-116.478,-61.949,6.014)
O6: (-108.898,-65.006,5.304)
O4': (-114.744,-62.328,7.634)
C8: (-112.943,-63.729,6.163)
C2: (-109.104,-62.426,7.735)
C6: (-109.431,-64.163,6.056)
C5: (-110.814,-63.852,6.231)
C4: (-111.171,-62.880,7.113)
P: (-116.622,-63.613,4.022)
C4': (-115.484,-61.304,6.925)
C2': (-113.321,-60.485,7.306)
O2': (-113.668,-59.605,8.363)
N1: (-108.646,-63.371,6.877)
N2: (-108.215,-61.751,8.446)
N3: (-110.360,-62.146,7.887)
N7: (-111.956,-64.383,5.647)
N9: (-112.539,-62.806,7.056)
O5': (-115.850,-62.902,5.193)
O3': (-114.808,-59.241,5.821)
OP2: (-115.655,-64.276,3.139)
C3': (-114.399,-60.509,6.250)
C1': (-113.412,-61.910,7.813)
C5': (-116.478,-61.949,6.014)
O6: (-108.898,-65.006,5.304)
O4': (-114.744,-62.328,7.634)
C8: (-112.943,-63.729,6.163)
C2: (-109.104,-62.426,7.735)
C6: (-109.431,-64.163,6.056)
C5: (-110.814,-63.852,6.231)
C4: (-111.171,-62.880,7.113)
P: (-116.622,-63.613,4.022)
C4': (-115.484,-61.304,6.925)
C2': (-113.321,-60.485,7.306)
O2': (-113.668,-59.605,8.363)
N1: (-108.646,-63.371,6.877)
N2: (-108.215,-61.751,8.446)
N3: (-110.360,-62.146,7.887)
N7: (-111.956,-64.383,5.647)
N9: (-112.539,-62.806,7.056)
O5': (-115.850,-62.902,5.193)
O3': (-114.808,-59.241,5.821)
C4: (-110.171,-63.003,2.905)
N3: (-108.892,-62.553,3.148)
OP1: (-115.133,-57.570,4.076)
OP2: (-114.709,-59.967,3.494)
C2: (-108.507,-61.458,3.864)
C1': (-109.245,-59.532,5.148)
C3': (-110.213,-57.732,4.011)
O5': (-112.909,-58.552,4.411)
O4': (-110.409,-59.162,5.830)
C5': (-112.339,-57.781,5.430)
P: (-114.452,-58.803,4.349)
C4': (-110.843,-57.861,5.380)
C2': (-108.857,-58.356,4.254)
O2': (-108.026,-57.477,4.999)
N1: (-109.550,-60.737,4.377)
O4: (-110.329,-64.030,2.238)
O2: (-107.343,-61.150,4.023)
C6: (-110.854,-61.126,4.176)
C5: (-111.207,-62.202,3.473)
O3': (-110.155,-56.398,3.566)
N3: (-108.892,-62.553,3.148)
OP1: (-115.133,-57.570,4.076)
OP2: (-114.709,-59.967,3.494)
C2: (-108.507,-61.458,3.864)
C1': (-109.245,-59.532,5.148)
C3': (-110.213,-57.732,4.011)
O5': (-112.909,-58.552,4.411)
O4': (-110.409,-59.162,5.830)
C5': (-112.339,-57.781,5.430)
P: (-114.452,-58.803,4.349)
C4': (-110.843,-57.861,5.380)
C2': (-108.857,-58.356,4.254)
O2': (-108.026,-57.477,4.999)
N1: (-109.550,-60.737,4.377)
O4: (-110.329,-64.030,2.238)
O2: (-107.343,-61.150,4.023)
C6: (-110.854,-61.126,4.176)
C5: (-111.207,-62.202,3.473)
O3': (-110.155,-56.398,3.566)
Image (generated by PyMOL):