Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXE:B16:B17
Extra
PDB:
ATOM 1 O3' C A 15 -5.332 -34.713 55.506 1.00 59.21 O
ATOM 2 P G A 16 -6.754 -35.089 56.130 1.00 59.06 P
ATOM 3 OP1 G A 16 -6.584 -35.330 57.580 1.00 59.78 O
ATOM 4 OP2 G A 16 -7.363 -36.133 55.278 1.00 58.63 O
ATOM 5 O5' G A 16 -7.580 -33.736 55.944 1.00 59.30 O
ATOM 6 C5' G A 16 -7.144 -32.535 56.578 1.00 59.36 C
ATOM 7 C4' G A 16 -7.939 -31.346 56.079 1.00 59.15 C
ATOM 8 O4' G A 16 -7.787 -31.197 54.644 1.00 58.82 O
ATOM 9 C3' G A 16 -9.440 -31.457 56.270 1.00 59.15 C
ATOM 10 O3' G A 16 -9.789 -31.129 57.603 1.00 60.32 O
ATOM 11 C2' G A 16 -9.915 -30.412 55.272 1.00 58.85 C
ATOM 12 O2' G A 16 -9.728 -29.098 55.752 1.00 59.42 O
ATOM 13 C1' G A 16 -8.990 -30.693 54.093 1.00 58.17 C
ATOM 14 N9 G A 16 -9.568 -31.661 53.159 1.00 57.16 N
ATOM 15 C8 G A 16 -9.300 -33.006 53.072 1.00 56.88 C
ATOM 16 N7 G A 16 -9.981 -33.620 52.143 1.00 56.69 N
ATOM 17 C5 G A 16 -10.756 -32.621 51.572 1.00 56.51 C
ATOM 18 C6 G A 16 -11.700 -32.682 50.511 1.00 56.23 C
ATOM 19 O6 G A 16 -12.046 -33.672 49.846 1.00 55.91 O
ATOM 20 N1 G A 16 -12.267 -31.431 50.247 1.00 56.20 N
ATOM 21 C2 G A 16 -11.960 -30.272 50.926 1.00 55.99 C
ATOM 22 N2 G A 16 -12.597 -29.161 50.545 1.00 55.96 N
ATOM 23 N3 G A 16 -11.083 -30.206 51.916 1.00 56.59 N
ATOM 24 C4 G A 16 -10.516 -31.410 52.189 1.00 56.85 C
ATOM 25 P U A 17 -11.159 -31.642 58.252 1.00 60.89 P
ATOM 26 OP1 U A 17 -11.087 -31.326 59.697 1.00 61.68 O
ATOM 27 OP2 U A 17 -11.397 -33.041 57.832 1.00 60.37 O
ATOM 28 O5' U A 17 -12.261 -30.716 57.545 1.00 60.98 O
TER
ATOM 1 O3' G B 16 -9.789 -31.129 57.603 1.00 60.32 O
ATOM 2 P U B 17 -11.159 -31.642 58.252 1.00 60.89 P
ATOM 3 OP1 U B 17 -11.087 -31.326 59.697 1.00 61.68 O
ATOM 4 OP2 U B 17 -11.397 -33.041 57.832 1.00 60.37 O
ATOM 5 O5' U B 17 -12.261 -30.716 57.545 1.00 60.98 O
ATOM 6 C5' U B 17 -12.538 -29.408 58.044 1.00 61.85 C
ATOM 7 C4' U B 17 -13.854 -28.850 57.528 1.00 62.38 C
ATOM 8 O4' U B 17 -13.765 -28.610 56.103 1.00 61.64 O
ATOM 9 C3' U B 17 -15.082 -29.745 57.639 1.00 63.10 C
ATOM 10 O3' U B 17 -15.600 -29.786 58.971 1.00 65.48 O
ATOM 11 C2' U B 17 -16.031 -29.057 56.658 1.00 62.48 C
ATOM 12 O2' U B 17 -16.709 -27.946 57.216 1.00 63.08 O
ATOM 13 C1' U B 17 -15.071 -28.619 55.552 1.00 61.34 C
ATOM 14 N1 U B 17 -15.112 -29.499 54.334 1.00 60.02 N
ATOM 15 C2 U B 17 -15.932 -29.149 53.271 1.00 59.72 C
ATOM 16 O2 U B 17 -16.631 -28.153 53.261 1.00 60.09 O
ATOM 17 N3 U B 17 -15.907 -30.010 52.195 1.00 58.77 N
ATOM 18 C4 U B 17 -15.161 -31.171 52.080 1.00 58.34 C
ATOM 19 O4 U B 17 -15.240 -31.847 51.061 1.00 57.70 O
ATOM 20 C5 U B 17 -14.332 -31.474 53.222 1.00 58.90 C
ATOM 21 C6 U B 17 -14.339 -30.648 54.280 1.00 59.50 C
ATOM 22 P U B 18 -16.569 -30.973 59.440 1.00 66.78 P
ATOM 23 OP1 U B 18 -17.814 -30.887 58.643 1.00 66.37 O
ATOM 24 OP2 U B 18 -16.645 -30.926 60.916 1.00 67.26 O
ATOM 25 O5' U B 18 -15.789 -32.304 59.012 1.00 68.10 O
TER
ATOM 2 P G A 16 -6.754 -35.089 56.130 1.00 59.06 P
ATOM 3 OP1 G A 16 -6.584 -35.330 57.580 1.00 59.78 O
ATOM 4 OP2 G A 16 -7.363 -36.133 55.278 1.00 58.63 O
ATOM 5 O5' G A 16 -7.580 -33.736 55.944 1.00 59.30 O
ATOM 6 C5' G A 16 -7.144 -32.535 56.578 1.00 59.36 C
ATOM 7 C4' G A 16 -7.939 -31.346 56.079 1.00 59.15 C
ATOM 8 O4' G A 16 -7.787 -31.197 54.644 1.00 58.82 O
ATOM 9 C3' G A 16 -9.440 -31.457 56.270 1.00 59.15 C
ATOM 10 O3' G A 16 -9.789 -31.129 57.603 1.00 60.32 O
ATOM 11 C2' G A 16 -9.915 -30.412 55.272 1.00 58.85 C
ATOM 12 O2' G A 16 -9.728 -29.098 55.752 1.00 59.42 O
ATOM 13 C1' G A 16 -8.990 -30.693 54.093 1.00 58.17 C
ATOM 14 N9 G A 16 -9.568 -31.661 53.159 1.00 57.16 N
ATOM 15 C8 G A 16 -9.300 -33.006 53.072 1.00 56.88 C
ATOM 16 N7 G A 16 -9.981 -33.620 52.143 1.00 56.69 N
ATOM 17 C5 G A 16 -10.756 -32.621 51.572 1.00 56.51 C
ATOM 18 C6 G A 16 -11.700 -32.682 50.511 1.00 56.23 C
ATOM 19 O6 G A 16 -12.046 -33.672 49.846 1.00 55.91 O
ATOM 20 N1 G A 16 -12.267 -31.431 50.247 1.00 56.20 N
ATOM 21 C2 G A 16 -11.960 -30.272 50.926 1.00 55.99 C
ATOM 22 N2 G A 16 -12.597 -29.161 50.545 1.00 55.96 N
ATOM 23 N3 G A 16 -11.083 -30.206 51.916 1.00 56.59 N
ATOM 24 C4 G A 16 -10.516 -31.410 52.189 1.00 56.85 C
ATOM 25 P U A 17 -11.159 -31.642 58.252 1.00 60.89 P
ATOM 26 OP1 U A 17 -11.087 -31.326 59.697 1.00 61.68 O
ATOM 27 OP2 U A 17 -11.397 -33.041 57.832 1.00 60.37 O
ATOM 28 O5' U A 17 -12.261 -30.716 57.545 1.00 60.98 O
TER
ATOM 1 O3' G B 16 -9.789 -31.129 57.603 1.00 60.32 O
ATOM 2 P U B 17 -11.159 -31.642 58.252 1.00 60.89 P
ATOM 3 OP1 U B 17 -11.087 -31.326 59.697 1.00 61.68 O
ATOM 4 OP2 U B 17 -11.397 -33.041 57.832 1.00 60.37 O
ATOM 5 O5' U B 17 -12.261 -30.716 57.545 1.00 60.98 O
ATOM 6 C5' U B 17 -12.538 -29.408 58.044 1.00 61.85 C
ATOM 7 C4' U B 17 -13.854 -28.850 57.528 1.00 62.38 C
ATOM 8 O4' U B 17 -13.765 -28.610 56.103 1.00 61.64 O
ATOM 9 C3' U B 17 -15.082 -29.745 57.639 1.00 63.10 C
ATOM 10 O3' U B 17 -15.600 -29.786 58.971 1.00 65.48 O
ATOM 11 C2' U B 17 -16.031 -29.057 56.658 1.00 62.48 C
ATOM 12 O2' U B 17 -16.709 -27.946 57.216 1.00 63.08 O
ATOM 13 C1' U B 17 -15.071 -28.619 55.552 1.00 61.34 C
ATOM 14 N1 U B 17 -15.112 -29.499 54.334 1.00 60.02 N
ATOM 15 C2 U B 17 -15.932 -29.149 53.271 1.00 59.72 C
ATOM 16 O2 U B 17 -16.631 -28.153 53.261 1.00 60.09 O
ATOM 17 N3 U B 17 -15.907 -30.010 52.195 1.00 58.77 N
ATOM 18 C4 U B 17 -15.161 -31.171 52.080 1.00 58.34 C
ATOM 19 O4 U B 17 -15.240 -31.847 51.061 1.00 57.70 O
ATOM 20 C5 U B 17 -14.332 -31.474 53.222 1.00 58.90 C
ATOM 21 C6 U B 17 -14.339 -30.648 54.280 1.00 59.50 C
ATOM 22 P U B 18 -16.569 -30.973 59.440 1.00 66.78 P
ATOM 23 OP1 U B 18 -17.814 -30.887 58.643 1.00 66.37 O
ATOM 24 OP2 U B 18 -16.645 -30.926 60.916 1.00 67.26 O
ATOM 25 O5' U B 18 -15.789 -32.304 59.012 1.00 68.10 O
TER
Atoms:
OP1: (-6.584,-35.330,57.580)
OP2: (-7.363,-36.133,55.278)
C3': (-9.440,-31.457,56.270)
C1': (-8.990,-30.693,54.093)
C5': (-7.144,-32.535,56.578)
O6: (-12.046,-33.672,49.846)
O4': (-7.787,-31.197,54.644)
C8: (-9.300,-33.006,53.072)
C2: (-11.960,-30.272,50.926)
C6: (-11.700,-32.682,50.511)
C5: (-10.756,-32.621,51.572)
C4: (-10.516,-31.410,52.189)
P: (-6.754,-35.089,56.130)
C4': (-7.939,-31.346,56.079)
C2': (-9.915,-30.412,55.272)
O2': (-9.728,-29.098,55.752)
N1: (-12.267,-31.431,50.247)
N2: (-12.597,-29.161,50.545)
N3: (-11.083,-30.206,51.916)
N7: (-9.981,-33.620,52.143)
N9: (-9.568,-31.661,53.159)
O5': (-7.580,-33.736,55.944)
O3': (-9.789,-31.129,57.603)
OP2: (-7.363,-36.133,55.278)
C3': (-9.440,-31.457,56.270)
C1': (-8.990,-30.693,54.093)
C5': (-7.144,-32.535,56.578)
O6: (-12.046,-33.672,49.846)
O4': (-7.787,-31.197,54.644)
C8: (-9.300,-33.006,53.072)
C2: (-11.960,-30.272,50.926)
C6: (-11.700,-32.682,50.511)
C5: (-10.756,-32.621,51.572)
C4: (-10.516,-31.410,52.189)
P: (-6.754,-35.089,56.130)
C4': (-7.939,-31.346,56.079)
C2': (-9.915,-30.412,55.272)
O2': (-9.728,-29.098,55.752)
N1: (-12.267,-31.431,50.247)
N2: (-12.597,-29.161,50.545)
N3: (-11.083,-30.206,51.916)
N7: (-9.981,-33.620,52.143)
N9: (-9.568,-31.661,53.159)
O5': (-7.580,-33.736,55.944)
O3': (-9.789,-31.129,57.603)
C4: (-15.161,-31.171,52.080)
N3: (-15.907,-30.010,52.195)
OP1: (-11.087,-31.326,59.697)
OP2: (-11.397,-33.041,57.832)
C2: (-15.932,-29.149,53.271)
C1': (-15.071,-28.619,55.552)
C3': (-15.082,-29.745,57.639)
O5': (-12.261,-30.716,57.545)
O4': (-13.765,-28.610,56.103)
C5': (-12.538,-29.408,58.044)
P: (-11.159,-31.642,58.252)
C4': (-13.854,-28.850,57.528)
C2': (-16.031,-29.057,56.658)
O2': (-16.709,-27.946,57.216)
N1: (-15.112,-29.499,54.334)
O4: (-15.240,-31.847,51.061)
O2: (-16.631,-28.153,53.261)
C6: (-14.339,-30.648,54.280)
C5: (-14.332,-31.474,53.222)
O3': (-15.600,-29.786,58.971)
N3: (-15.907,-30.010,52.195)
OP1: (-11.087,-31.326,59.697)
OP2: (-11.397,-33.041,57.832)
C2: (-15.932,-29.149,53.271)
C1': (-15.071,-28.619,55.552)
C3': (-15.082,-29.745,57.639)
O5': (-12.261,-30.716,57.545)
O4': (-13.765,-28.610,56.103)
C5': (-12.538,-29.408,58.044)
P: (-11.159,-31.642,58.252)
C4': (-13.854,-28.850,57.528)
C2': (-16.031,-29.057,56.658)
O2': (-16.709,-27.946,57.216)
N1: (-15.112,-29.499,54.334)
O4: (-15.240,-31.847,51.061)
O2: (-16.631,-28.153,53.261)
C6: (-14.339,-30.648,54.280)
C5: (-14.332,-31.474,53.222)
O3': (-15.600,-29.786,58.971)
Image (generated by PyMOL):