Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0649:0650
Extra
PDB:
ATOM 1 O3' A A 648 36.693 77.119 34.145 1.00 44.37 O
ATOM 2 P G A 649 36.077 77.803 32.828 1.00 46.51 P
ATOM 3 OP1 G A 649 35.403 76.752 32.019 1.00 47.10 O
ATOM 4 OP2 G A 649 37.157 78.619 32.223 1.00 47.04 O
ATOM 5 O5' G A 649 34.959 78.784 33.394 1.00 43.92 O
ATOM 6 C5' G A 649 35.228 80.182 33.566 1.00 44.12 C
ATOM 7 C4' G A 649 35.444 80.508 35.028 1.00 43.46 C
ATOM 8 O4' G A 649 36.692 79.925 35.489 1.00 42.77 O
ATOM 9 C3' G A 649 35.626 81.989 35.288 1.00 42.51 C
ATOM 10 O3' G A 649 34.370 82.633 35.388 1.00 43.47 O
ATOM 11 C2' G A 649 36.398 81.998 36.593 1.00 42.73 C
ATOM 12 O2' G A 649 35.578 81.762 37.714 1.00 45.70 O
ATOM 13 C1' G A 649 37.339 80.814 36.380 1.00 41.65 C
ATOM 14 N9 G A 649 38.599 81.237 35.776 1.00 42.72 N
ATOM 15 C8 G A 649 39.073 80.944 34.519 1.00 42.63 C
ATOM 16 N7 G A 649 40.235 81.485 34.272 1.00 41.92 N
ATOM 17 C5 G A 649 40.547 82.175 35.434 1.00 42.34 C
ATOM 18 C6 G A 649 41.686 82.946 35.769 1.00 42.51 C
ATOM 19 O6 G A 649 42.669 83.209 35.075 1.00 42.02 O
ATOM 20 N1 G A 649 41.605 83.438 37.064 1.00 43.37 N
ATOM 21 C2 G A 649 40.558 83.230 37.927 1.00 44.07 C
ATOM 22 N2 G A 649 40.663 83.777 39.150 1.00 43.27 N
ATOM 23 N3 G A 649 39.486 82.532 37.620 1.00 44.64 N
ATOM 24 C4 G A 649 39.549 82.030 36.371 1.00 43.25 C
ATOM 25 P U A 650 34.099 83.974 34.556 1.00 43.70 P
ATOM 26 OP1 U A 650 32.637 84.197 34.504 1.00 40.56 O
ATOM 27 OP2 U A 650 34.882 83.890 33.298 1.00 41.69 O
ATOM 28 O5' U A 650 34.737 85.111 35.459 1.00 43.09 O
TER
ATOM 1 O3' G B 649 34.370 82.633 35.388 1.00 43.47 O
ATOM 2 P U B 650 34.099 83.974 34.556 1.00 43.70 P
ATOM 3 OP1 U B 650 32.637 84.197 34.504 1.00 40.56 O
ATOM 4 OP2 U B 650 34.882 83.890 33.298 1.00 41.69 O
ATOM 5 O5' U B 650 34.737 85.111 35.459 1.00 43.09 O
ATOM 6 C5' U B 650 34.397 85.230 36.847 1.00 41.69 C
ATOM 7 C4' U B 650 35.486 85.980 37.567 1.00 40.81 C
ATOM 8 O4' U B 650 36.710 85.203 37.534 1.00 41.00 O
ATOM 9 C3' U B 650 35.872 87.293 36.915 1.00 39.17 C
ATOM 10 O3' U B 650 34.980 88.328 37.296 1.00 38.10 O
ATOM 11 C2' U B 650 37.288 87.506 37.422 1.00 38.17 C
ATOM 12 O2' U B 650 37.313 87.977 38.747 1.00 38.71 O
ATOM 13 C1' U B 650 37.822 86.075 37.428 1.00 39.06 C
ATOM 14 N1 U B 650 38.595 85.718 36.231 1.00 38.36 N
ATOM 15 C2 U B 650 39.905 86.143 36.161 1.00 38.54 C
ATOM 16 O2 U B 650 40.440 86.794 37.037 1.00 39.03 O
ATOM 17 N3 U B 650 40.569 85.783 35.022 1.00 38.51 N
ATOM 18 C4 U B 650 40.066 85.071 33.965 1.00 39.54 C
ATOM 19 O4 U B 650 40.766 84.897 32.969 1.00 42.99 O
ATOM 20 C5 U B 650 38.712 84.663 34.113 1.00 40.37 C
ATOM 21 C6 U B 650 38.039 84.992 35.214 1.00 39.51 C
ATOM 22 P C B 651 34.668 89.515 36.266 1.00 40.78 P
ATOM 23 OP1 C B 651 33.536 90.290 36.841 1.00 37.75 O
ATOM 24 OP2 C B 651 34.570 88.973 34.888 1.00 37.91 O
ATOM 25 O5' C B 651 35.979 90.410 36.315 1.00 40.58 O
TER
ATOM 2 P G A 649 36.077 77.803 32.828 1.00 46.51 P
ATOM 3 OP1 G A 649 35.403 76.752 32.019 1.00 47.10 O
ATOM 4 OP2 G A 649 37.157 78.619 32.223 1.00 47.04 O
ATOM 5 O5' G A 649 34.959 78.784 33.394 1.00 43.92 O
ATOM 6 C5' G A 649 35.228 80.182 33.566 1.00 44.12 C
ATOM 7 C4' G A 649 35.444 80.508 35.028 1.00 43.46 C
ATOM 8 O4' G A 649 36.692 79.925 35.489 1.00 42.77 O
ATOM 9 C3' G A 649 35.626 81.989 35.288 1.00 42.51 C
ATOM 10 O3' G A 649 34.370 82.633 35.388 1.00 43.47 O
ATOM 11 C2' G A 649 36.398 81.998 36.593 1.00 42.73 C
ATOM 12 O2' G A 649 35.578 81.762 37.714 1.00 45.70 O
ATOM 13 C1' G A 649 37.339 80.814 36.380 1.00 41.65 C
ATOM 14 N9 G A 649 38.599 81.237 35.776 1.00 42.72 N
ATOM 15 C8 G A 649 39.073 80.944 34.519 1.00 42.63 C
ATOM 16 N7 G A 649 40.235 81.485 34.272 1.00 41.92 N
ATOM 17 C5 G A 649 40.547 82.175 35.434 1.00 42.34 C
ATOM 18 C6 G A 649 41.686 82.946 35.769 1.00 42.51 C
ATOM 19 O6 G A 649 42.669 83.209 35.075 1.00 42.02 O
ATOM 20 N1 G A 649 41.605 83.438 37.064 1.00 43.37 N
ATOM 21 C2 G A 649 40.558 83.230 37.927 1.00 44.07 C
ATOM 22 N2 G A 649 40.663 83.777 39.150 1.00 43.27 N
ATOM 23 N3 G A 649 39.486 82.532 37.620 1.00 44.64 N
ATOM 24 C4 G A 649 39.549 82.030 36.371 1.00 43.25 C
ATOM 25 P U A 650 34.099 83.974 34.556 1.00 43.70 P
ATOM 26 OP1 U A 650 32.637 84.197 34.504 1.00 40.56 O
ATOM 27 OP2 U A 650 34.882 83.890 33.298 1.00 41.69 O
ATOM 28 O5' U A 650 34.737 85.111 35.459 1.00 43.09 O
TER
ATOM 1 O3' G B 649 34.370 82.633 35.388 1.00 43.47 O
ATOM 2 P U B 650 34.099 83.974 34.556 1.00 43.70 P
ATOM 3 OP1 U B 650 32.637 84.197 34.504 1.00 40.56 O
ATOM 4 OP2 U B 650 34.882 83.890 33.298 1.00 41.69 O
ATOM 5 O5' U B 650 34.737 85.111 35.459 1.00 43.09 O
ATOM 6 C5' U B 650 34.397 85.230 36.847 1.00 41.69 C
ATOM 7 C4' U B 650 35.486 85.980 37.567 1.00 40.81 C
ATOM 8 O4' U B 650 36.710 85.203 37.534 1.00 41.00 O
ATOM 9 C3' U B 650 35.872 87.293 36.915 1.00 39.17 C
ATOM 10 O3' U B 650 34.980 88.328 37.296 1.00 38.10 O
ATOM 11 C2' U B 650 37.288 87.506 37.422 1.00 38.17 C
ATOM 12 O2' U B 650 37.313 87.977 38.747 1.00 38.71 O
ATOM 13 C1' U B 650 37.822 86.075 37.428 1.00 39.06 C
ATOM 14 N1 U B 650 38.595 85.718 36.231 1.00 38.36 N
ATOM 15 C2 U B 650 39.905 86.143 36.161 1.00 38.54 C
ATOM 16 O2 U B 650 40.440 86.794 37.037 1.00 39.03 O
ATOM 17 N3 U B 650 40.569 85.783 35.022 1.00 38.51 N
ATOM 18 C4 U B 650 40.066 85.071 33.965 1.00 39.54 C
ATOM 19 O4 U B 650 40.766 84.897 32.969 1.00 42.99 O
ATOM 20 C5 U B 650 38.712 84.663 34.113 1.00 40.37 C
ATOM 21 C6 U B 650 38.039 84.992 35.214 1.00 39.51 C
ATOM 22 P C B 651 34.668 89.515 36.266 1.00 40.78 P
ATOM 23 OP1 C B 651 33.536 90.290 36.841 1.00 37.75 O
ATOM 24 OP2 C B 651 34.570 88.973 34.888 1.00 37.91 O
ATOM 25 O5' C B 651 35.979 90.410 36.315 1.00 40.58 O
TER
Atoms:
OP1: (35.403,76.752,32.019)
OP2: (37.157,78.619,32.223)
C3': (35.626,81.989,35.288)
C1': (37.339,80.814,36.380)
C5': (35.228,80.182,33.566)
O6: (42.669,83.209,35.075)
O4': (36.692,79.925,35.489)
C8: (39.073,80.944,34.519)
C2: (40.558,83.230,37.927)
C6: (41.686,82.946,35.769)
C5: (40.547,82.175,35.434)
C4: (39.549,82.030,36.371)
P: (36.077,77.803,32.828)
C4': (35.444,80.508,35.028)
C2': (36.398,81.998,36.593)
O2': (35.578,81.762,37.714)
N1: (41.605,83.438,37.064)
N2: (40.663,83.777,39.150)
N3: (39.486,82.532,37.620)
N7: (40.235,81.485,34.272)
N9: (38.599,81.237,35.776)
O5': (34.959,78.784,33.394)
O3': (34.370,82.633,35.388)
OP2: (37.157,78.619,32.223)
C3': (35.626,81.989,35.288)
C1': (37.339,80.814,36.380)
C5': (35.228,80.182,33.566)
O6: (42.669,83.209,35.075)
O4': (36.692,79.925,35.489)
C8: (39.073,80.944,34.519)
C2: (40.558,83.230,37.927)
C6: (41.686,82.946,35.769)
C5: (40.547,82.175,35.434)
C4: (39.549,82.030,36.371)
P: (36.077,77.803,32.828)
C4': (35.444,80.508,35.028)
C2': (36.398,81.998,36.593)
O2': (35.578,81.762,37.714)
N1: (41.605,83.438,37.064)
N2: (40.663,83.777,39.150)
N3: (39.486,82.532,37.620)
N7: (40.235,81.485,34.272)
N9: (38.599,81.237,35.776)
O5': (34.959,78.784,33.394)
O3': (34.370,82.633,35.388)
C4: (40.066,85.071,33.965)
N3: (40.569,85.783,35.022)
OP1: (32.637,84.197,34.504)
OP2: (34.882,83.890,33.298)
C2: (39.905,86.143,36.161)
C1': (37.822,86.075,37.428)
C3': (35.872,87.293,36.915)
O5': (34.737,85.111,35.459)
O4': (36.710,85.203,37.534)
C5': (34.397,85.230,36.847)
P: (34.099,83.974,34.556)
C4': (35.486,85.980,37.567)
C2': (37.288,87.506,37.422)
O2': (37.313,87.977,38.747)
N1: (38.595,85.718,36.231)
O4: (40.766,84.897,32.969)
O2: (40.440,86.794,37.037)
C6: (38.039,84.992,35.214)
C5: (38.712,84.663,34.113)
O3': (34.980,88.328,37.296)
N3: (40.569,85.783,35.022)
OP1: (32.637,84.197,34.504)
OP2: (34.882,83.890,33.298)
C2: (39.905,86.143,36.161)
C1': (37.822,86.075,37.428)
C3': (35.872,87.293,36.915)
O5': (34.737,85.111,35.459)
O4': (36.710,85.203,37.534)
C5': (34.397,85.230,36.847)
P: (34.099,83.974,34.556)
C4': (35.486,85.980,37.567)
C2': (37.288,87.506,37.422)
O2': (37.313,87.977,38.747)
N1: (38.595,85.718,36.231)
O4: (40.766,84.897,32.969)
O2: (40.440,86.794,37.037)
C6: (38.039,84.992,35.214)
C5: (38.712,84.663,34.113)
O3': (34.980,88.328,37.296)
Image (generated by PyMOL):