Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:01053:01054
Extra
PDB:
ATOM 1 O3' G A1052 3.892 102.840 102.641 1.00 41.06 O
ATOM 2 P G A1053 4.661 102.729 104.054 1.00 41.83 P
ATOM 3 OP1 G A1053 3.649 103.066 105.084 1.00 40.43 O
ATOM 4 OP2 G A1053 5.920 103.514 103.982 1.00 43.21 O
ATOM 5 O5' G A1053 5.075 101.192 104.188 1.00 40.92 O
ATOM 6 C5' G A1053 4.105 100.197 104.533 1.00 40.17 C
ATOM 7 C4' G A1053 4.710 98.805 104.515 1.00 39.77 C
ATOM 8 O4' G A1053 5.346 98.538 103.240 1.00 38.35 O
ATOM 9 C3' G A1053 5.794 98.442 105.518 1.00 38.81 C
ATOM 10 O3' G A1053 5.240 98.159 106.803 1.00 40.48 O
ATOM 11 C2' G A1053 6.329 97.159 104.898 1.00 39.21 C
ATOM 12 O2' G A1053 5.460 96.068 105.095 1.00 40.48 O
ATOM 13 C1' G A1053 6.303 97.505 103.410 1.00 39.66 C
ATOM 14 N9 G A1053 7.612 97.967 102.959 1.00 41.35 N
ATOM 15 C8 G A1053 8.018 99.259 102.722 1.00 41.51 C
ATOM 16 N7 G A1053 9.269 99.341 102.357 1.00 41.50 N
ATOM 17 C5 G A1053 9.714 98.025 102.344 1.00 40.47 C
ATOM 18 C6 G A1053 10.989 97.485 102.027 1.00 41.25 C
ATOM 19 O6 G A1053 12.018 98.080 101.674 1.00 41.82 O
ATOM 20 N1 G A1053 11.001 96.102 102.153 1.00 40.98 N
ATOM 21 C2 G A1053 9.930 95.336 102.529 1.00 40.46 C
ATOM 22 N2 G A1053 10.141 94.021 102.596 1.00 37.84 N
ATOM 23 N3 G A1053 8.739 95.823 102.818 1.00 40.53 N
ATOM 24 C4 G A1053 8.703 97.166 102.708 1.00 40.47 C
ATOM 25 P U A1054 6.166 98.214 108.123 1.00 40.78 P
ATOM 26 OP1 U A1054 5.258 97.909 109.254 1.00 40.40 O
ATOM 27 OP2 U A1054 6.936 99.484 108.135 1.00 41.47 O
ATOM 28 O5' U A1054 7.199 97.012 107.952 1.00 36.18 O
TER
ATOM 1 O3' G B1053 5.240 98.159 106.803 1.00 40.48 O
ATOM 2 P U B1054 6.166 98.214 108.123 1.00 40.78 P
ATOM 3 OP1 U B1054 5.258 97.909 109.254 1.00 40.40 O
ATOM 4 OP2 U B1054 6.936 99.484 108.135 1.00 41.47 O
ATOM 5 O5' U B1054 7.199 97.012 107.952 1.00 36.18 O
ATOM 6 C5' U B1054 6.790 95.652 108.138 1.00 35.43 C
ATOM 7 C4' U B1054 7.956 94.714 107.925 1.00 37.92 C
ATOM 8 O4' U B1054 8.467 94.858 106.572 1.00 39.82 O
ATOM 9 C3' U B1054 9.184 94.935 108.789 1.00 38.33 C
ATOM 10 O3' U B1054 9.035 94.368 110.079 1.00 39.60 O
ATOM 11 C2' U B1054 10.269 94.231 107.987 1.00 38.39 C
ATOM 12 O2' U B1054 10.253 92.828 108.139 1.00 36.85 O
ATOM 13 C1' U B1054 9.862 94.587 106.557 1.00 39.53 C
ATOM 14 N1 U B1054 10.581 95.769 106.053 1.00 40.31 N
ATOM 15 C2 U B1054 11.790 95.558 105.408 1.00 41.68 C
ATOM 16 O2 U B1054 12.252 94.444 105.204 1.00 43.62 O
ATOM 17 N3 U B1054 12.436 96.697 105.003 1.00 41.49 N
ATOM 18 C4 U B1054 12.005 97.994 105.157 1.00 41.76 C
ATOM 19 O4 U B1054 12.713 98.919 104.758 1.00 42.09 O
ATOM 20 C5 U B1054 10.740 98.128 105.808 1.00 41.85 C
ATOM 21 C6 U B1054 10.089 97.039 106.224 1.00 41.01 C
ATOM 22 P U B1055 10.204 94.547 111.162 1.00 41.56 P
ATOM 23 OP1 U B1055 9.694 94.024 112.449 1.00 43.35 O
ATOM 24 OP2 U B1055 10.706 95.941 111.084 1.00 42.59 O
ATOM 25 O5' U B1055 11.346 93.561 110.654 1.00 41.16 O
TER
ATOM 2 P G A1053 4.661 102.729 104.054 1.00 41.83 P
ATOM 3 OP1 G A1053 3.649 103.066 105.084 1.00 40.43 O
ATOM 4 OP2 G A1053 5.920 103.514 103.982 1.00 43.21 O
ATOM 5 O5' G A1053 5.075 101.192 104.188 1.00 40.92 O
ATOM 6 C5' G A1053 4.105 100.197 104.533 1.00 40.17 C
ATOM 7 C4' G A1053 4.710 98.805 104.515 1.00 39.77 C
ATOM 8 O4' G A1053 5.346 98.538 103.240 1.00 38.35 O
ATOM 9 C3' G A1053 5.794 98.442 105.518 1.00 38.81 C
ATOM 10 O3' G A1053 5.240 98.159 106.803 1.00 40.48 O
ATOM 11 C2' G A1053 6.329 97.159 104.898 1.00 39.21 C
ATOM 12 O2' G A1053 5.460 96.068 105.095 1.00 40.48 O
ATOM 13 C1' G A1053 6.303 97.505 103.410 1.00 39.66 C
ATOM 14 N9 G A1053 7.612 97.967 102.959 1.00 41.35 N
ATOM 15 C8 G A1053 8.018 99.259 102.722 1.00 41.51 C
ATOM 16 N7 G A1053 9.269 99.341 102.357 1.00 41.50 N
ATOM 17 C5 G A1053 9.714 98.025 102.344 1.00 40.47 C
ATOM 18 C6 G A1053 10.989 97.485 102.027 1.00 41.25 C
ATOM 19 O6 G A1053 12.018 98.080 101.674 1.00 41.82 O
ATOM 20 N1 G A1053 11.001 96.102 102.153 1.00 40.98 N
ATOM 21 C2 G A1053 9.930 95.336 102.529 1.00 40.46 C
ATOM 22 N2 G A1053 10.141 94.021 102.596 1.00 37.84 N
ATOM 23 N3 G A1053 8.739 95.823 102.818 1.00 40.53 N
ATOM 24 C4 G A1053 8.703 97.166 102.708 1.00 40.47 C
ATOM 25 P U A1054 6.166 98.214 108.123 1.00 40.78 P
ATOM 26 OP1 U A1054 5.258 97.909 109.254 1.00 40.40 O
ATOM 27 OP2 U A1054 6.936 99.484 108.135 1.00 41.47 O
ATOM 28 O5' U A1054 7.199 97.012 107.952 1.00 36.18 O
TER
ATOM 1 O3' G B1053 5.240 98.159 106.803 1.00 40.48 O
ATOM 2 P U B1054 6.166 98.214 108.123 1.00 40.78 P
ATOM 3 OP1 U B1054 5.258 97.909 109.254 1.00 40.40 O
ATOM 4 OP2 U B1054 6.936 99.484 108.135 1.00 41.47 O
ATOM 5 O5' U B1054 7.199 97.012 107.952 1.00 36.18 O
ATOM 6 C5' U B1054 6.790 95.652 108.138 1.00 35.43 C
ATOM 7 C4' U B1054 7.956 94.714 107.925 1.00 37.92 C
ATOM 8 O4' U B1054 8.467 94.858 106.572 1.00 39.82 O
ATOM 9 C3' U B1054 9.184 94.935 108.789 1.00 38.33 C
ATOM 10 O3' U B1054 9.035 94.368 110.079 1.00 39.60 O
ATOM 11 C2' U B1054 10.269 94.231 107.987 1.00 38.39 C
ATOM 12 O2' U B1054 10.253 92.828 108.139 1.00 36.85 O
ATOM 13 C1' U B1054 9.862 94.587 106.557 1.00 39.53 C
ATOM 14 N1 U B1054 10.581 95.769 106.053 1.00 40.31 N
ATOM 15 C2 U B1054 11.790 95.558 105.408 1.00 41.68 C
ATOM 16 O2 U B1054 12.252 94.444 105.204 1.00 43.62 O
ATOM 17 N3 U B1054 12.436 96.697 105.003 1.00 41.49 N
ATOM 18 C4 U B1054 12.005 97.994 105.157 1.00 41.76 C
ATOM 19 O4 U B1054 12.713 98.919 104.758 1.00 42.09 O
ATOM 20 C5 U B1054 10.740 98.128 105.808 1.00 41.85 C
ATOM 21 C6 U B1054 10.089 97.039 106.224 1.00 41.01 C
ATOM 22 P U B1055 10.204 94.547 111.162 1.00 41.56 P
ATOM 23 OP1 U B1055 9.694 94.024 112.449 1.00 43.35 O
ATOM 24 OP2 U B1055 10.706 95.941 111.084 1.00 42.59 O
ATOM 25 O5' U B1055 11.346 93.561 110.654 1.00 41.16 O
TER
Atoms:
OP1: (3.649,103.066,105.084)
OP2: (5.920,103.514,103.982)
C3': (5.794,98.442,105.518)
C1': (6.303,97.505,103.410)
C5': (4.105,100.197,104.533)
O6: (12.018,98.080,101.674)
O4': (5.346,98.538,103.240)
C8: (8.018,99.259,102.722)
C2: (9.930,95.336,102.529)
C6: (10.989,97.485,102.027)
C5: (9.714,98.025,102.344)
C4: (8.703,97.166,102.708)
P: (4.661,102.729,104.054)
C4': (4.710,98.805,104.515)
C2': (6.329,97.159,104.898)
O2': (5.460,96.068,105.095)
N1: (11.001,96.102,102.153)
N2: (10.141,94.021,102.596)
N3: (8.739,95.823,102.818)
N7: (9.269,99.341,102.357)
N9: (7.612,97.967,102.959)
O5': (5.075,101.192,104.188)
O3': (5.240,98.159,106.803)
OP2: (5.920,103.514,103.982)
C3': (5.794,98.442,105.518)
C1': (6.303,97.505,103.410)
C5': (4.105,100.197,104.533)
O6: (12.018,98.080,101.674)
O4': (5.346,98.538,103.240)
C8: (8.018,99.259,102.722)
C2: (9.930,95.336,102.529)
C6: (10.989,97.485,102.027)
C5: (9.714,98.025,102.344)
C4: (8.703,97.166,102.708)
P: (4.661,102.729,104.054)
C4': (4.710,98.805,104.515)
C2': (6.329,97.159,104.898)
O2': (5.460,96.068,105.095)
N1: (11.001,96.102,102.153)
N2: (10.141,94.021,102.596)
N3: (8.739,95.823,102.818)
N7: (9.269,99.341,102.357)
N9: (7.612,97.967,102.959)
O5': (5.075,101.192,104.188)
O3': (5.240,98.159,106.803)
C4: (12.005,97.994,105.157)
N3: (12.436,96.697,105.003)
OP1: (5.258,97.909,109.254)
OP2: (6.936,99.484,108.135)
C2: (11.790,95.558,105.408)
C1': (9.862,94.587,106.557)
C3': (9.184,94.935,108.789)
O5': (7.199,97.012,107.952)
O4': (8.467,94.858,106.572)
C5': (6.790,95.652,108.138)
P: (6.166,98.214,108.123)
C4': (7.956,94.714,107.925)
C2': (10.269,94.231,107.987)
O2': (10.253,92.828,108.139)
N1: (10.581,95.769,106.053)
O4: (12.713,98.919,104.758)
O2: (12.252,94.444,105.204)
C6: (10.089,97.039,106.224)
C5: (10.740,98.128,105.808)
O3': (9.035,94.368,110.079)
N3: (12.436,96.697,105.003)
OP1: (5.258,97.909,109.254)
OP2: (6.936,99.484,108.135)
C2: (11.790,95.558,105.408)
C1': (9.862,94.587,106.557)
C3': (9.184,94.935,108.789)
O5': (7.199,97.012,107.952)
O4': (8.467,94.858,106.572)
C5': (6.790,95.652,108.138)
P: (6.166,98.214,108.123)
C4': (7.956,94.714,107.925)
C2': (10.269,94.231,107.987)
O2': (10.253,92.828,108.139)
N1: (10.581,95.769,106.053)
O4: (12.713,98.919,104.758)
O2: (12.252,94.444,105.204)
C6: (10.089,97.039,106.224)
C5: (10.740,98.128,105.808)
O3': (9.035,94.368,110.079)
Image (generated by PyMOL):