Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0500:0476
Extra
PDB:
ATOM 1 O3' A A 499 23.708 152.175 62.284 1.00 50.82 O
ATOM 2 P G A 500 23.853 153.475 63.213 1.00 49.74 P
ATOM 3 OP1 G A 500 24.984 153.237 64.135 1.00 49.96 O
ATOM 4 OP2 G A 500 22.518 153.821 63.766 1.00 48.01 O
ATOM 5 O5' G A 500 24.292 154.610 62.195 1.00 47.53 O
ATOM 6 C5' G A 500 25.418 154.418 61.337 1.00 48.32 C
ATOM 7 C4' G A 500 26.237 155.681 61.272 1.00 49.46 C
ATOM 8 O4' G A 500 25.489 156.710 60.575 1.00 50.03 O
ATOM 9 C3' G A 500 26.613 156.276 62.624 1.00 50.42 C
ATOM 10 O3' G A 500 27.854 156.942 62.483 1.00 51.73 O
ATOM 11 C2' G A 500 25.515 157.304 62.852 1.00 50.80 C
ATOM 12 O2' G A 500 25.913 158.352 63.716 1.00 50.38 O
ATOM 13 C1' G A 500 25.306 157.823 61.430 1.00 51.78 C
ATOM 14 N9 G A 500 23.992 158.404 61.155 1.00 53.25 N
ATOM 15 C8 G A 500 22.886 158.422 61.977 1.00 53.62 C
ATOM 16 N7 G A 500 21.868 159.045 61.449 1.00 54.34 N
ATOM 17 C5 G A 500 22.327 159.460 60.206 1.00 54.16 C
ATOM 18 C6 G A 500 21.672 160.183 59.186 1.00 54.20 C
ATOM 19 O6 G A 500 20.530 160.640 59.187 1.00 54.93 O
ATOM 20 N1 G A 500 22.494 160.366 58.077 1.00 54.16 N
ATOM 21 C2 G A 500 23.789 159.921 57.974 1.00 53.37 C
ATOM 22 N2 G A 500 24.427 160.188 56.825 1.00 53.02 N
ATOM 23 N3 G A 500 24.415 159.261 58.926 1.00 53.60 N
ATOM 24 C4 G A 500 23.630 159.064 60.006 1.00 53.25 C
ATOM 25 P A A 501 29.010 156.722 63.567 1.00 51.15 P
ATOM 26 OP1 A A 501 28.576 155.716 64.575 1.00 50.05 O
ATOM 27 OP2 A A 501 29.415 158.083 64.004 1.00 51.94 O
ATOM 28 O5' A A 501 30.192 156.095 62.713 1.00 51.22 O
TER
ATOM 1 O3' G B 475 25.967 163.553 55.517 1.00 46.94 O
ATOM 2 P U B 476 26.649 164.911 56.033 1.00 47.28 P
ATOM 3 OP1 U B 476 27.078 165.708 54.856 1.00 45.06 O
ATOM 4 OP2 U B 476 27.654 164.551 57.068 1.00 48.61 O
ATOM 5 O5' U B 476 25.452 165.653 56.775 1.00 47.04 O
ATOM 6 C5' U B 476 24.256 166.024 56.069 1.00 49.87 C
ATOM 7 C4' U B 476 23.106 166.174 57.037 1.00 52.15 C
ATOM 8 O4' U B 476 22.800 164.885 57.609 1.00 53.32 O
ATOM 9 C3' U B 476 23.380 167.040 58.258 1.00 54.07 C
ATOM 10 O3' U B 476 23.176 168.413 57.944 1.00 57.80 O
ATOM 11 C2' U B 476 22.326 166.555 59.248 1.00 54.02 C
ATOM 12 O2' U B 476 21.072 167.173 59.060 1.00 55.43 O
ATOM 13 C1' U B 476 22.192 165.076 58.871 1.00 54.04 C
ATOM 14 N1 U B 476 22.720 164.087 59.829 1.00 54.54 N
ATOM 15 C2 U B 476 22.048 163.935 61.033 1.00 54.71 C
ATOM 16 O2 U B 476 21.088 164.615 61.350 1.00 56.09 O
ATOM 17 N3 U B 476 22.546 162.961 61.856 1.00 54.05 N
ATOM 18 C4 U B 476 23.630 162.150 61.618 1.00 54.23 C
ATOM 19 O4 U B 476 23.946 161.305 62.455 1.00 54.53 O
ATOM 20 C5 U B 476 24.288 162.385 60.371 1.00 54.46 C
ATOM 21 C6 U B 476 23.825 163.321 59.542 1.00 53.91 C
ATOM 22 P A B 477 24.237 169.519 58.422 1.00 59.85 P
ATOM 23 OP1 A B 477 25.485 169.361 57.634 1.00 60.69 O
ATOM 24 OP2 A B 477 24.296 169.492 59.905 1.00 59.62 O
ATOM 25 O5' A B 477 23.568 170.889 57.964 1.00 61.51 O
TER
ATOM 2 P G A 500 23.853 153.475 63.213 1.00 49.74 P
ATOM 3 OP1 G A 500 24.984 153.237 64.135 1.00 49.96 O
ATOM 4 OP2 G A 500 22.518 153.821 63.766 1.00 48.01 O
ATOM 5 O5' G A 500 24.292 154.610 62.195 1.00 47.53 O
ATOM 6 C5' G A 500 25.418 154.418 61.337 1.00 48.32 C
ATOM 7 C4' G A 500 26.237 155.681 61.272 1.00 49.46 C
ATOM 8 O4' G A 500 25.489 156.710 60.575 1.00 50.03 O
ATOM 9 C3' G A 500 26.613 156.276 62.624 1.00 50.42 C
ATOM 10 O3' G A 500 27.854 156.942 62.483 1.00 51.73 O
ATOM 11 C2' G A 500 25.515 157.304 62.852 1.00 50.80 C
ATOM 12 O2' G A 500 25.913 158.352 63.716 1.00 50.38 O
ATOM 13 C1' G A 500 25.306 157.823 61.430 1.00 51.78 C
ATOM 14 N9 G A 500 23.992 158.404 61.155 1.00 53.25 N
ATOM 15 C8 G A 500 22.886 158.422 61.977 1.00 53.62 C
ATOM 16 N7 G A 500 21.868 159.045 61.449 1.00 54.34 N
ATOM 17 C5 G A 500 22.327 159.460 60.206 1.00 54.16 C
ATOM 18 C6 G A 500 21.672 160.183 59.186 1.00 54.20 C
ATOM 19 O6 G A 500 20.530 160.640 59.187 1.00 54.93 O
ATOM 20 N1 G A 500 22.494 160.366 58.077 1.00 54.16 N
ATOM 21 C2 G A 500 23.789 159.921 57.974 1.00 53.37 C
ATOM 22 N2 G A 500 24.427 160.188 56.825 1.00 53.02 N
ATOM 23 N3 G A 500 24.415 159.261 58.926 1.00 53.60 N
ATOM 24 C4 G A 500 23.630 159.064 60.006 1.00 53.25 C
ATOM 25 P A A 501 29.010 156.722 63.567 1.00 51.15 P
ATOM 26 OP1 A A 501 28.576 155.716 64.575 1.00 50.05 O
ATOM 27 OP2 A A 501 29.415 158.083 64.004 1.00 51.94 O
ATOM 28 O5' A A 501 30.192 156.095 62.713 1.00 51.22 O
TER
ATOM 1 O3' G B 475 25.967 163.553 55.517 1.00 46.94 O
ATOM 2 P U B 476 26.649 164.911 56.033 1.00 47.28 P
ATOM 3 OP1 U B 476 27.078 165.708 54.856 1.00 45.06 O
ATOM 4 OP2 U B 476 27.654 164.551 57.068 1.00 48.61 O
ATOM 5 O5' U B 476 25.452 165.653 56.775 1.00 47.04 O
ATOM 6 C5' U B 476 24.256 166.024 56.069 1.00 49.87 C
ATOM 7 C4' U B 476 23.106 166.174 57.037 1.00 52.15 C
ATOM 8 O4' U B 476 22.800 164.885 57.609 1.00 53.32 O
ATOM 9 C3' U B 476 23.380 167.040 58.258 1.00 54.07 C
ATOM 10 O3' U B 476 23.176 168.413 57.944 1.00 57.80 O
ATOM 11 C2' U B 476 22.326 166.555 59.248 1.00 54.02 C
ATOM 12 O2' U B 476 21.072 167.173 59.060 1.00 55.43 O
ATOM 13 C1' U B 476 22.192 165.076 58.871 1.00 54.04 C
ATOM 14 N1 U B 476 22.720 164.087 59.829 1.00 54.54 N
ATOM 15 C2 U B 476 22.048 163.935 61.033 1.00 54.71 C
ATOM 16 O2 U B 476 21.088 164.615 61.350 1.00 56.09 O
ATOM 17 N3 U B 476 22.546 162.961 61.856 1.00 54.05 N
ATOM 18 C4 U B 476 23.630 162.150 61.618 1.00 54.23 C
ATOM 19 O4 U B 476 23.946 161.305 62.455 1.00 54.53 O
ATOM 20 C5 U B 476 24.288 162.385 60.371 1.00 54.46 C
ATOM 21 C6 U B 476 23.825 163.321 59.542 1.00 53.91 C
ATOM 22 P A B 477 24.237 169.519 58.422 1.00 59.85 P
ATOM 23 OP1 A B 477 25.485 169.361 57.634 1.00 60.69 O
ATOM 24 OP2 A B 477 24.296 169.492 59.905 1.00 59.62 O
ATOM 25 O5' A B 477 23.568 170.889 57.964 1.00 61.51 O
TER
Atoms:
OP1: (24.984,153.237,64.135)
OP2: (22.518,153.821,63.766)
C3': (26.613,156.276,62.624)
C1': (25.306,157.823,61.430)
C5': (25.418,154.418,61.337)
O6: (20.530,160.640,59.187)
O4': (25.489,156.710,60.575)
C8: (22.886,158.422,61.977)
C2: (23.789,159.921,57.974)
C6: (21.672,160.183,59.186)
C5: (22.327,159.460,60.206)
C4: (23.630,159.064,60.006)
P: (23.853,153.475,63.213)
C4': (26.237,155.681,61.272)
C2': (25.515,157.304,62.852)
O2': (25.913,158.352,63.716)
N1: (22.494,160.366,58.077)
N2: (24.427,160.188,56.825)
N3: (24.415,159.261,58.926)
N7: (21.868,159.045,61.449)
N9: (23.992,158.404,61.155)
O5': (24.292,154.610,62.195)
O3': (27.854,156.942,62.483)
OP2: (22.518,153.821,63.766)
C3': (26.613,156.276,62.624)
C1': (25.306,157.823,61.430)
C5': (25.418,154.418,61.337)
O6: (20.530,160.640,59.187)
O4': (25.489,156.710,60.575)
C8: (22.886,158.422,61.977)
C2: (23.789,159.921,57.974)
C6: (21.672,160.183,59.186)
C5: (22.327,159.460,60.206)
C4: (23.630,159.064,60.006)
P: (23.853,153.475,63.213)
C4': (26.237,155.681,61.272)
C2': (25.515,157.304,62.852)
O2': (25.913,158.352,63.716)
N1: (22.494,160.366,58.077)
N2: (24.427,160.188,56.825)
N3: (24.415,159.261,58.926)
N7: (21.868,159.045,61.449)
N9: (23.992,158.404,61.155)
O5': (24.292,154.610,62.195)
O3': (27.854,156.942,62.483)
C4: (23.630,162.150,61.618)
N3: (22.546,162.961,61.856)
OP1: (27.078,165.708,54.856)
OP2: (27.654,164.551,57.068)
C2: (22.048,163.935,61.033)
C1': (22.192,165.076,58.871)
C3': (23.380,167.040,58.258)
O5': (25.452,165.653,56.775)
O4': (22.800,164.885,57.609)
C5': (24.256,166.024,56.069)
P: (26.649,164.911,56.033)
C4': (23.106,166.174,57.037)
C2': (22.326,166.555,59.248)
O2': (21.072,167.173,59.060)
N1: (22.720,164.087,59.829)
O4: (23.946,161.305,62.455)
O2: (21.088,164.615,61.350)
C6: (23.825,163.321,59.542)
C5: (24.288,162.385,60.371)
O3': (23.176,168.413,57.944)
N3: (22.546,162.961,61.856)
OP1: (27.078,165.708,54.856)
OP2: (27.654,164.551,57.068)
C2: (22.048,163.935,61.033)
C1': (22.192,165.076,58.871)
C3': (23.380,167.040,58.258)
O5': (25.452,165.653,56.775)
O4': (22.800,164.885,57.609)
C5': (24.256,166.024,56.069)
P: (26.649,164.911,56.033)
C4': (23.106,166.174,57.037)
C2': (22.326,166.555,59.248)
O2': (21.072,167.173,59.060)
N1: (22.720,164.087,59.829)
O4: (23.946,161.305,62.455)
O2: (21.088,164.615,61.350)
C6: (23.825,163.321,59.542)
C5: (24.288,162.385,60.371)
O3': (23.176,168.413,57.944)
Image (generated by PyMOL):